Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
Ettwig KF, Butler MK, Le Paslier D, Pelletier E, Mangenot S, Kuypers MMM, Schreiber F, Dutilh BE, Zedelius J, de Beer D, Gloerich J, et al. (2010)
Nature 464(7288): 543-548.
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Autor*in
Ettwig, Katharina F.;
Butler, Margaret K.;
Le Paslier, Denis;
Pelletier, Eric;
Mangenot, Sophie;
Kuypers, Marcel M. M.;
Schreiber, Frank;
Dutilh, Bas E.;
Zedelius, Johannes;
de Beer, Dirk;
Gloerich, Jolein;
Wessels, Hans J. C. T.
Alle
Alle
Einrichtung
Abstract / Bemerkung
Only three biological pathways are known to produce oxygen: photosynthesis, chlorate respiration and the detoxification of reactive oxygen species. Here we present evidence for a fourth pathway, possibly of considerable geochemical and evolutionary importance. The pathway was discovered after metagenomic sequencing of an enrichment culture that couples anaerobic oxidation of methane with the reduction of nitrite to dinitrogen. The complete genome of the dominant bacterium, named 'Candidatus Methylomirabilis oxyfera', was assembled. This apparently anaerobic, denitrifying bacterium encoded, transcribed and expressed the well-established aerobic pathway for methane oxidation, whereas it lacked known genes for dinitrogen production. Subsequent isotopic labelling indicated that 'M. oxyfera' bypassed the denitrification intermediate nitrous oxide by the conversion of two nitric oxidemolecules to dinitrogen and oxygen, which was used to oxidize methane. These results extend our understanding of hydrocarbon degradation under anoxic conditions and explain the biochemical mechanism of a poorly understood freshwater methane sink. Because nitrogen oxides were already present on early Earth, our finding opens up the possibility that oxygen was available to microbial metabolism before the evolution of oxygenic photosynthesis.
Erscheinungsjahr
2010
Zeitschriftentitel
Nature
Band
464
Ausgabe
7288
Seite(n)
543-548
ISSN
0028-0836
eISSN
1476-4687
Page URI
https://pub.uni-bielefeld.de/record/1796356
Zitieren
Ettwig KF, Butler MK, Le Paslier D, et al. Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature. 2010;464(7288):543-548.
Ettwig, K. F., Butler, M. K., Le Paslier, D., Pelletier, E., Mangenot, S., Kuypers, M. M. M., Schreiber, F., et al. (2010). Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature, 464(7288), 543-548. https://doi.org/10.1038/nature08883
Ettwig, Katharina F., Butler, Margaret K., Le Paslier, Denis, Pelletier, Eric, Mangenot, Sophie, Kuypers, Marcel M. M., Schreiber, Frank, et al. 2010. “Nitrite-driven anaerobic methane oxidation by oxygenic bacteria”. Nature 464 (7288): 543-548.
Ettwig, K. F., Butler, M. K., Le Paslier, D., Pelletier, E., Mangenot, S., Kuypers, M. M. M., Schreiber, F., Dutilh, B. E., Zedelius, J., de Beer, D., et al. (2010). Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature 464, 543-548.
Ettwig, K.F., et al., 2010. Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature, 464(7288), p 543-548.
K.F. Ettwig, et al., “Nitrite-driven anaerobic methane oxidation by oxygenic bacteria”, Nature, vol. 464, 2010, pp. 543-548.
Ettwig, K.F., Butler, M.K., Le Paslier, D., Pelletier, E., Mangenot, S., Kuypers, M.M.M., Schreiber, F., Dutilh, B.E., Zedelius, J., de Beer, D., Gloerich, J., Wessels, H.J.C.T., van Alen, T., Luesken, F., Wu, M.L., van de Pas-Schoonen, K.T., den Camp, H.J.M.O., Janssen-Megens, E.M., Francoijs, K.-J., Stunnenberg, H., Weissenbach, J., Jetten, M.S.M., Strous, M.: Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature. 464, 543-548 (2010).
Ettwig, Katharina F., Butler, Margaret K., Le Paslier, Denis, Pelletier, Eric, Mangenot, Sophie, Kuypers, Marcel M. M., Schreiber, Frank, Dutilh, Bas E., Zedelius, Johannes, de Beer, Dirk, Gloerich, Jolein, Wessels, Hans J. C. T., van Alen, Theo, Luesken, Francisca, Wu, Ming L., van de Pas-Schoonen, Katinka T., den Camp, Huub J. M. Op, Janssen-Megens, Eva M., Francoijs, Kees-Jan, Stunnenberg, Henk, Weissenbach, Jean, Jetten, Mike S. M., and Strous, Marc. “Nitrite-driven anaerobic methane oxidation by oxygenic bacteria”. Nature 464.7288 (2010): 543-548.
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UNIPROT
3057 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden
Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (UNIPROT: D5MHI3)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Uncharacterized protein (UNIPROT: D5MGS7)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Putative Glycosyl transferase, family 2 (UNIPROT: D5MIZ5)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Uncharacterized protein (UNIPROT: D5MF04)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Methyltransferase (UNIPROT: D5MMJ8)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Putative mxaA protein, involved in Ca2+ insertion in methanol dehydrogenase (UNIPROT: D5MI84)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Uncharacterized protein (UNIPROT: D5MMA5)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Putative pyruvate, phosphate dikinase regulatory protein (UNIPROT: D5MFP3)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
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5'-methylthioadenosine phosphorylase (UNIPROT: D5MEU5)
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
Queuine tRNA-ribosyltransferase (UNIPROT: D5MIU8)
Organism: Candidatus Methylomirabilis oxyfera
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Organism: Candidatus Methylomirabilis oxyfera
Download in FASTA format
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Guerrero-Cruz S, Cremers G, van Alen TA, Op den Camp HJM, Jetten MSM, Rasigraf O, Vaksmaa A., Appl Environ Microbiol 84(24), 2018
PMID: 30291120
Guerrero-Cruz S, Cremers G, van Alen TA, Op den Camp HJM, Jetten MSM, Rasigraf O, Vaksmaa A., Appl Environ Microbiol 84(24), 2018
PMID: 30291120
Upland soil cluster γ dominates the methanotroph communities in the karst Heshang Cave.
Zhao R, Wang H, Cheng X, Yun Y, Qiu X., FEMS Microbiol Ecol 94(12), 2018
PMID: 30265314
Zhao R, Wang H, Cheng X, Yun Y, Qiu X., FEMS Microbiol Ecol 94(12), 2018
PMID: 30265314
Diversity of NC10 bacteria associated with sediments of submerged Potamogeton crispus (Alismatales: Potmogetonaceae).
Wang B, Huang S, Zhang L, Zhao J, Liu G, Hua Y, Zhou W, Zhu D., PeerJ 6(), 2018
PMID: 30533317
Wang B, Huang S, Zhang L, Zhao J, Liu G, Hua Y, Zhou W, Zhu D., PeerJ 6(), 2018
PMID: 30533317
Genomic and in-situ Transcriptomic Characterization of the Candidate Phylum NPL-UPL2 From Highly Alkaline Highly Reducing Serpentinized Groundwater.
Suzuki S, Nealson KH, Ishii S., Front Microbiol 9(), 2018
PMID: 30619209
Suzuki S, Nealson KH, Ishii S., Front Microbiol 9(), 2018
PMID: 30619209
Response of gaseous carbon emissions to low-level salinity increase in tidal marsh ecosystem of the Min River estuary, southeastern China.
Hu M, Ren H, Ren P, Li J, Wilson BJ, Tong C., J Environ Sci (China) 52(), 2017
PMID: 28254041
Hu M, Ren H, Ren P, Li J, Wilson BJ, Tong C., J Environ Sci (China) 52(), 2017
PMID: 28254041
Crown group Oxyphotobacteria postdate the rise of oxygen.
Shih PM, Hemp J, Ward LM, Matzke NJ, Fischer WW., Geobiology 15(1), 2017
PMID: 27392323
Shih PM, Hemp J, Ward LM, Matzke NJ, Fischer WW., Geobiology 15(1), 2017
PMID: 27392323
Biogas-based denitrification in a biotrickling filter: Influence of nitrate concentration and hydrogen sulfide.
López JC, Porca E, Collins G, Pérez R, Rodríguez-Alija A, Muñoz R, Quijano G., Biotechnol Bioeng 114(3), 2017
PMID: 27596480
López JC, Porca E, Collins G, Pérez R, Rodríguez-Alija A, Muñoz R, Quijano G., Biotechnol Bioeng 114(3), 2017
PMID: 27596480
Sediment nitrite-dependent methane-oxidizing microorganisms temporally and spatially shift in the Dongjiang River.
Long Y, Jiang X, Guo Q, Li B, Xie S., Appl Microbiol Biotechnol 101(1), 2017
PMID: 27726022
Long Y, Jiang X, Guo Q, Li B, Xie S., Appl Microbiol Biotechnol 101(1), 2017
PMID: 27726022
Simultaneous enrichment of denitrifying anaerobic methane-oxidizing microorganisms and anammox bacteria in a hollow-fiber membrane biofilm reactor.
Ding ZW, Lu YZ, Fu L, Ding J, Zeng RJ., Appl Microbiol Biotechnol 101(1), 2017
PMID: 27734125
Ding ZW, Lu YZ, Fu L, Ding J, Zeng RJ., Appl Microbiol Biotechnol 101(1), 2017
PMID: 27734125
Evaluation of the impact of organic material on the anaerobic methane and ammonium removal in a membrane aerated biofilm reactor (MABR) based on the multispecies biofilm modeling.
Wu J, Zhang Y., Environ Sci Pollut Res Int 24(2), 2017
PMID: 27796976
Wu J, Zhang Y., Environ Sci Pollut Res Int 24(2), 2017
PMID: 27796976
The ecology of anaerobic degraders of BTEX hydrocarbons in aquifers.
Lueders T., FEMS Microbiol Ecol 93(1), 2017
PMID: 27810873
Lueders T., FEMS Microbiol Ecol 93(1), 2017
PMID: 27810873
Emission and oxidation of methane in a meromictic, eutrophic and temperate lake (Dendre, Belgium).
Roland FAE, Darchambeau F, Morana C, Bouillon S, Borges AV., Chemosphere 168(), 2017
PMID: 27836279
Roland FAE, Darchambeau F, Morana C, Bouillon S, Borges AV., Chemosphere 168(), 2017
PMID: 27836279
An improved protocol with a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria.
Wang JG, Xia F, Zeleke J, Zou B, Rhee SK, Quan ZX., FEMS Microbiol Ecol 93(3), 2017
PMID: 27940646
Wang JG, Xia F, Zeleke J, Zou B, Rhee SK, Quan ZX., FEMS Microbiol Ecol 93(3), 2017
PMID: 27940646
Decoupling of DAMO archaea from DAMO bacteria in a methane-driven microbial fuel cell.
Ding J, Lu YZ, Fu L, Ding ZW, Mu Y, Cheng SH, Zeng RJ., Water Res 110(), 2017
PMID: 27998783
Ding J, Lu YZ, Fu L, Ding ZW, Mu Y, Cheng SH, Zeng RJ., Water Res 110(), 2017
PMID: 27998783
Methane ameliorates spinal cord ischemia-reperfusion injury in rats: Antioxidant, anti-inflammatory and anti-apoptotic activity mediated by Nrf2 activation.
Wang L, Yao Y, He R, Meng Y, Li N, Zhang D, Xu J, Chen O, Cui J, Bian J, Zhang Y, Chen G, Deng X., Free Radic Biol Med 103(), 2017
PMID: 28007572
Wang L, Yao Y, He R, Meng Y, Li N, Zhang D, Xu J, Chen O, Cui J, Bian J, Zhang Y, Chen G, Deng X., Free Radic Biol Med 103(), 2017
PMID: 28007572
McrA primers for the detection and quantification of the anaerobic archaeal methanotroph 'Candidatus Methanoperedens nitroreducens'.
Vaksmaa A, Jetten MS, Ettwig KF, Lüke C., Appl Microbiol Biotechnol 101(4), 2017
PMID: 28084539
Vaksmaa A, Jetten MS, Ettwig KF, Lüke C., Appl Microbiol Biotechnol 101(4), 2017
PMID: 28084539
Using 13C isotopes to explore denitrification-dependent anaerobic methane oxidation in a paddy-peatland.
Shi Y, Wang Z, He C, Zhang X, Sheng L, Ren X., Sci Rep 7(), 2017
PMID: 28098207
Shi Y, Wang Z, He C, Zhang X, Sheng L, Ren X., Sci Rep 7(), 2017
PMID: 28098207
Optical sorting and cultivation of denitrifying anaerobic methane oxidation archaea.
Qi X, Carberry DM, Cai C, Hu S, Yuan Z, Dunlop HR, Guo J., Biomed Opt Express 8(2), 2017
PMID: 28270994
Qi X, Carberry DM, Cai C, Hu S, Yuan Z, Dunlop HR, Guo J., Biomed Opt Express 8(2), 2017
PMID: 28270994
Faunal Burrows Alter the Diversity, Abundance, and Structure of AOA, AOB, Anammox and n-Damo Communities in Coastal Mangrove Sediments.
Chen J, Gu JD., Microb Ecol 74(1), 2017
PMID: 28130576
Chen J, Gu JD., Microb Ecol 74(1), 2017
PMID: 28130576
Vertical and horizontal distribution of sediment nitrite-dependent methane-oxidizing organisms in a mesotrophic freshwater reservoir.
Long Y, Liu C, Lin H, Li N, Guo Q, Xie S., Can J Microbiol 63(6), 2017
PMID: 28177782
Long Y, Liu C, Lin H, Li N, Guo Q, Xie S., Can J Microbiol 63(6), 2017
PMID: 28177782
Unexpected Diversity and High Abundance of Putative Nitric Oxide Dismutase (Nod) Genes in Contaminated Aquifers and Wastewater Treatment Systems.
Zhu B, Bradford L, Huang S, Szalay A, Leix C, Weissbach M, Táncsics A, Drewes JE, Lueders T., Appl Environ Microbiol 83(4), 2017
PMID: 27986721
Zhu B, Bradford L, Huang S, Szalay A, Leix C, Weissbach M, Táncsics A, Drewes JE, Lueders T., Appl Environ Microbiol 83(4), 2017
PMID: 27986721
Nitrogen source effects on the denitrifying anaerobic methane oxidation culture and anaerobic ammonium oxidation bacteria enrichment process.
Fu L, Ding J, Lu YZ, Ding ZW, Zeng RJ., Appl Microbiol Biotechnol 101(9), 2017
PMID: 28168315
Fu L, Ding J, Lu YZ, Ding ZW, Zeng RJ., Appl Microbiol Biotechnol 101(9), 2017
PMID: 28168315
Geological and Geochemical Controls on Subsurface Microbial Life in the Samail Ophiolite, Oman.
Rempfert KR, Miller HM, Bompard N, Nothaft D, Matter JM, Kelemen P, Fierer N, Templeton AS., Front Microbiol 8(), 2017
PMID: 28223966
Rempfert KR, Miller HM, Bompard N, Nothaft D, Matter JM, Kelemen P, Fierer N, Templeton AS., Front Microbiol 8(), 2017
PMID: 28223966
Is denitrifying anaerobic methane oxidation-centered technologies a solution for the sustainable operation of wastewater treatment Plants?
Wang D, Wang Y, Liu Y, Ngo HH, Lian Y, Zhao J, Chen F, Yang Q, Zeng G, Li X., Bioresour Technol 234(), 2017
PMID: 28363395
Wang D, Wang Y, Liu Y, Ngo HH, Lian Y, Zhao J, Chen F, Yang Q, Zeng G, Li X., Bioresour Technol 234(), 2017
PMID: 28363395
Abundant carbon substrates drive extremely high sulfate reduction rates and methane fluxes in Prairie Pothole Wetlands.
Dalcin Martins P, Hoyt DW, Bansal S, Mills CT, Tfaily M, Tangen BA, Finocchiaro RG, Johnston MD, McAdams BC, Solensky MJ, Smith GJ, Chin YP, Wilkins MJ., Glob Chang Biol 23(8), 2017
PMID: 28117550
Dalcin Martins P, Hoyt DW, Bansal S, Mills CT, Tfaily M, Tangen BA, Finocchiaro RG, Johnston MD, McAdams BC, Solensky MJ, Smith GJ, Chin YP, Wilkins MJ., Glob Chang Biol 23(8), 2017
PMID: 28117550
Lipids as paleomarkers to constrain the marine nitrogen cycle.
Rush D, Sinninghe Damsté JS., Environ Microbiol 19(6), 2017
PMID: 28142226
Rush D, Sinninghe Damsté JS., Environ Microbiol 19(6), 2017
PMID: 28142226
Origin and fate of methane in the Eastern Tropical North Pacific oxygen minimum zone.
Chronopoulou PM, Shelley F, Pritchard WJ, Maanoja ST, Trimmer M., ISME J 11(6), 2017
PMID: 28244978
Chronopoulou PM, Shelley F, Pritchard WJ, Maanoja ST, Trimmer M., ISME J 11(6), 2017
PMID: 28244978
Glucosylglycerate metabolism, bioversatility and mycobacterial survival.
Nunes-Costa D, Maranha A, Costa M, Alarico S, Empadinhas N., Glycobiology 27(3), 2017
PMID: 28025249
Nunes-Costa D, Maranha A, Costa M, Alarico S, Empadinhas N., Glycobiology 27(3), 2017
PMID: 28025249
Wastewater Opportunities for Denitrifying Anaerobic Methane Oxidation.
Wang Y, Wang D, Yang Q, Zeng G, Li X., Trends Biotechnol 35(9), 2017
PMID: 28283198
Wang Y, Wang D, Yang Q, Zeng G, Li X., Trends Biotechnol 35(9), 2017
PMID: 28283198
Energy Metabolism during Anaerobic Methane Oxidation in ANME Archaea.
McGlynn SE., Microbes Environ 32(1), 2017
PMID: 28321009
McGlynn SE., Microbes Environ 32(1), 2017
PMID: 28321009
Changes and relations of photosynthesis and iron cycling in anoxic paddy soil amended with high concentrations of sulfate.
Chen Q, Jia R, Qu D, Li M., Environ Sci Pollut Res Int 24(12), 2017
PMID: 28316044
Chen Q, Jia R, Qu D, Li M., Environ Sci Pollut Res Int 24(12), 2017
PMID: 28316044
High-resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils.
Narrowe AB, Angle JC, Daly RA, Stefanik KC, Wrighton KC, Miller CS., Environ Microbiol 19(6), 2017
PMID: 28217877
Narrowe AB, Angle JC, Daly RA, Stefanik KC, Wrighton KC, Miller CS., Environ Microbiol 19(6), 2017
PMID: 28217877
A plea for linguistic accuracy - also for Candidatus taxa.
Oren A., Int J Syst Evol Microbiol 67(4), 2017
PMID: 27926819
Oren A., Int J Syst Evol Microbiol 67(4), 2017
PMID: 27926819
Factors influencing ruminal bacterial community diversity and composition and microbial fibrolytic enzyme abundance in lactating dairy cows with a focus on the role of active dry yeast.
AlZahal O, Li F, Guan LL, Walker ND, McBride BW., J Dairy Sci 100(6), 2017
PMID: 28390722
AlZahal O, Li F, Guan LL, Walker ND, McBride BW., J Dairy Sci 100(6), 2017
PMID: 28390722
Microbial and Isotopic Evidence for Methane Cycling in Hydrocarbon-Containing Groundwater from the Pennsylvania Region.
Vigneron A, Bishop A, Alsop EB, Hull K, Rhodes I, Hendricks R, Head IM, Tsesmetzis N., Front Microbiol 8(), 2017
PMID: 28424678
Vigneron A, Bishop A, Alsop EB, Hull K, Rhodes I, Hendricks R, Head IM, Tsesmetzis N., Front Microbiol 8(), 2017
PMID: 28424678
Anaerobic Methane-Oxidizing Microbial Community in a Coastal Marine Sediment: Anaerobic Methanotrophy Dominated by ANME-3.
Bhattarai S, Cassarini C, Gonzalez-Gil G, Egger M, Slomp CP, Zhang Y, Esposito G, Lens PNL., Microb Ecol 74(3), 2017
PMID: 28389729
Bhattarai S, Cassarini C, Gonzalez-Gil G, Egger M, Slomp CP, Zhang Y, Esposito G, Lens PNL., Microb Ecol 74(3), 2017
PMID: 28389729
Anaerobic Methanotrophic Archaea of the ANME-2d Cluster Are Active in a Low-sulfate, Iron-rich Freshwater Sediment.
Weber HS, Habicht KS, Thamdrup B., Front Microbiol 8(), 2017
PMID: 28446901
Weber HS, Habicht KS, Thamdrup B., Front Microbiol 8(), 2017
PMID: 28446901
Cultivation of denitrifying anaerobic methane-oxidizing microorganisms in a continuous-flow sponge bioreactor.
Hatamoto M, Sato T, Nemoto S, Yamaguchi T., Appl Microbiol Biotechnol 101(14), 2017
PMID: 28484811
Hatamoto M, Sato T, Nemoto S, Yamaguchi T., Appl Microbiol Biotechnol 101(14), 2017
PMID: 28484811
A New Primer to Amplify pmoA Gene From NC10 Bacteria in the Sediments of Dongchang Lake and Dongping Lake.
Wang S, Liu Y, Liu G, Huang Y, Zhou Y., Curr Microbiol 74(8), 2017
PMID: 28501892
Wang S, Liu Y, Liu G, Huang Y, Zhou Y., Curr Microbiol 74(8), 2017
PMID: 28501892
Anaerobic Methane Oxidation Driven by Microbial Reduction of Natural Organic Matter in a Tropical Wetland.
Valenzuela EI, Prieto-Davó A, López-Lozano NE, Hernández-Eligio A, Vega-Alvarado L, Juárez K, García-González AS, López MG, Cervantes FJ., Appl Environ Microbiol 83(11), 2017
PMID: 28341676
Valenzuela EI, Prieto-Davó A, López-Lozano NE, Hernández-Eligio A, Vega-Alvarado L, Juárez K, García-González AS, López MG, Cervantes FJ., Appl Environ Microbiol 83(11), 2017
PMID: 28341676
Methane Dynamics in a Tropical Serpentinizing Environment: The Santa Elena Ophiolite, Costa Rica.
Crespo-Medina M, Twing KI, Sánchez-Murillo R, Brazelton WJ, McCollom TM, Schrenk MO., Front Microbiol 8(), 2017
PMID: 28588569
Crespo-Medina M, Twing KI, Sánchez-Murillo R, Brazelton WJ, McCollom TM, Schrenk MO., Front Microbiol 8(), 2017
PMID: 28588569
Anthropogenic protection alters the microbiome in intertidal mangrove wetlands in Hainan Island.
Yun J, Deng Y, Zhang H., Appl Microbiol Biotechnol 101(15), 2017
PMID: 28560604
Yun J, Deng Y, Zhang H., Appl Microbiol Biotechnol 101(15), 2017
PMID: 28560604
Crenothrix are major methane consumers in stratified lakes.
Oswald K, Graf JS, Littmann S, Tienken D, Brand A, Wehrli B, Albertsen M, Daims H, Wagner M, Kuypers MM, Schubert CJ, Milucka J., ISME J 11(9), 2017
PMID: 28585934
Oswald K, Graf JS, Littmann S, Tienken D, Brand A, Wehrli B, Albertsen M, Daims H, Wagner M, Kuypers MM, Schubert CJ, Milucka J., ISME J 11(9), 2017
PMID: 28585934
Quantification of the methane concentration using anaerobic oxidation of methane coupled to extracellular electron transfer.
Gao Y, Ryu H, Rittmann BE, Hussain A, Lee HS., Bioresour Technol 241(), 2017
PMID: 28637165
Gao Y, Ryu H, Rittmann BE, Hussain A, Lee HS., Bioresour Technol 241(), 2017
PMID: 28637165
Communal metabolism of methane and the rare Earth element switch.
Yu Z, Chistoserdova L., J Bacteriol 199(22), 2017
PMID: 28630125
Yu Z, Chistoserdova L., J Bacteriol 199(22), 2017
PMID: 28630125
Co-existence of Anaerobic Ammonium Oxidation Bacteria and Denitrifying Anaerobic Methane Oxidation Bacteria in Sewage Sludge: Community Diversity and Seasonal Dynamics.
Xu S, Lu W, Mustafa MF, Caicedo LM, Guo H, Fu X, Wang H., Microb Ecol 74(4), 2017
PMID: 28634638
Xu S, Lu W, Mustafa MF, Caicedo LM, Guo H, Fu X, Wang H., Microb Ecol 74(4), 2017
PMID: 28634638
Cooccurrence and potential role of nitrite- and nitrate-dependent methanotrophs in freshwater marsh sediments.
Shen LD, Wu HS, Liu X, Li J., Water Res 123(), 2017
PMID: 28668629
Shen LD, Wu HS, Liu X, Li J., Water Res 123(), 2017
PMID: 28668629
Concurrent Methane Production and Oxidation in Surface Sediment from Aarhus Bay, Denmark.
Xiao KQ, Beulig F, Kjeldsen KU, Jørgensen BB, Risgaard-Petersen N., Front Microbiol 8(), 2017
PMID: 28713339
Xiao KQ, Beulig F, Kjeldsen KU, Jørgensen BB, Risgaard-Petersen N., Front Microbiol 8(), 2017
PMID: 28713339
Effects of alternative electron acceptors on the activity and community structure of methane-producing and consuming microbes in the sediments of two shallow boreal lakes.
Rissanen AJ, Karvinen A, Nykänen H, Peura S, Tiirola M, Mäki A, Kankaala P., FEMS Microbiol Ecol 93(7), 2017
PMID: 28637304
Rissanen AJ, Karvinen A, Nykänen H, Peura S, Tiirola M, Mäki A, Kankaala P., FEMS Microbiol Ecol 93(7), 2017
PMID: 28637304
The deep, hot biosphere: Twenty-five years of retrospection.
Colman DR, Poudel S, Stamps BW, Boyd ES, Spear JR., Proc Natl Acad Sci U S A 114(27), 2017
PMID: 28674200
Colman DR, Poudel S, Stamps BW, Boyd ES, Spear JR., Proc Natl Acad Sci U S A 114(27), 2017
PMID: 28674200
Monodeuterated Methane, an Isotopic Tool To Assess Biological Methane Metabolism Rates.
Marlow JJ, Steele JA, Ziebis W, Scheller S, Case D, Reynard LM, Orphan VJ., mSphere 2(4), 2017
PMID: 28861523
Marlow JJ, Steele JA, Ziebis W, Scheller S, Case D, Reynard LM, Orphan VJ., mSphere 2(4), 2017
PMID: 28861523
Anaerobic oxidation of methane by aerobic methanotrophs in sub-Arctic lake sediments.
Martinez-Cruz K, Leewis MC, Herriott IC, Sepulveda-Jauregui A, Anthony KW, Thalasso F, Leigh MB., Sci Total Environ 607-608(), 2017
PMID: 28686892
Martinez-Cruz K, Leewis MC, Herriott IC, Sepulveda-Jauregui A, Anthony KW, Thalasso F, Leigh MB., Sci Total Environ 607-608(), 2017
PMID: 28686892
Anaerobic oxidation of methane coupled with extracellular electron transfer to electrodes.
Gao Y, Lee J, Neufeld JD, Park J, Rittmann BE, Lee HS., Sci Rep 7(1), 2017
PMID: 28698657
Gao Y, Lee J, Neufeld JD, Park J, Rittmann BE, Lee HS., Sci Rep 7(1), 2017
PMID: 28698657
A comparative study revealed first insights into the diversity and metabolisms of the microbial communities in the sediments of Pacmanus and Desmos hydrothermal fields.
Wang HL, Zhang J, Sun QL, Lian C, Sun L., PLoS One 12(7), 2017
PMID: 28704556
Wang HL, Zhang J, Sun QL, Lian C, Sun L., PLoS One 12(7), 2017
PMID: 28704556
Effect of freshwater mussels on the vertical distribution of anaerobic ammonia oxidizers and other nitrogen-transforming microorganisms in upper Mississippi river sediment.
Black EM, Chimenti MS, Just CL., PeerJ 5(), 2017
PMID: 28717594
Black EM, Chimenti MS, Just CL., PeerJ 5(), 2017
PMID: 28717594
Present and Future of Culturing Bacteria.
Overmann J, Abt B, Sikorski J., Annu Rev Microbiol 71(), 2017
PMID: 28731846
Overmann J, Abt B, Sikorski J., Annu Rev Microbiol 71(), 2017
PMID: 28731846
Mixotrophy drives niche expansion of verrucomicrobial methanotrophs.
Carere CR, Hards K, Houghton KM, Power JF, McDonald B, Collet C, Gapes DJ, Sparling R, Boyd ES, Cook GM, Greening C, Stott MB., ISME J 11(11), 2017
PMID: 28777381
Carere CR, Hards K, Houghton KM, Power JF, McDonald B, Collet C, Gapes DJ, Sparling R, Boyd ES, Cook GM, Greening C, Stott MB., ISME J 11(11), 2017
PMID: 28777381
Enrichment of anaerobic nitrate-dependent methanotrophic 'Candidatus Methanoperedens nitroreducens' archaea from an Italian paddy field soil.
Vaksmaa A, Guerrero-Cruz S, van Alen TA, Cremers G, Ettwig KF, Lüke C, Jetten MSM., Appl Microbiol Biotechnol 101(18), 2017
PMID: 28779290
Vaksmaa A, Guerrero-Cruz S, van Alen TA, Cremers G, Ettwig KF, Lüke C, Jetten MSM., Appl Microbiol Biotechnol 101(18), 2017
PMID: 28779290
Spatial and temporal distribution of nitrite-dependent anaerobic methane-oxidizing bacteria in an intertidal zone of the East China Sea.
Wang J, Shen L, He Z, Hu J, Cai Z, Zheng P, Hu B., Appl Microbiol Biotechnol 101(21), 2017
PMID: 28948330
Wang J, Shen L, He Z, Hu J, Cai Z, Zheng P, Hu B., Appl Microbiol Biotechnol 101(21), 2017
PMID: 28948330
Methane: Fuel or Exhaust at the Emergence of Life?
Russell MJ, Nitschke W., Astrobiology 17(10), 2017
PMID: 28949766
Russell MJ, Nitschke W., Astrobiology 17(10), 2017
PMID: 28949766
Stratification of Diversity and Activity of Methanogenic and Methanotrophic Microorganisms in a Nitrogen-Fertilized Italian Paddy Soil.
Vaksmaa A, van Alen TA, Ettwig KF, Lupotto E, Valè G, Jetten MSM, Lüke C., Front Microbiol 8(), 2017
PMID: 29180985
Vaksmaa A, van Alen TA, Ettwig KF, Lupotto E, Valè G, Jetten MSM, Lüke C., Front Microbiol 8(), 2017
PMID: 29180985
Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to Thermodesulfovibrio.
Arshad A, Dalcin Martins P, Frank J, Jetten MSM, Op den Camp HJM, Welte CU., Environ Microbiol 19(12), 2017
PMID: 29105249
Arshad A, Dalcin Martins P, Frank J, Jetten MSM, Op den Camp HJM, Welte CU., Environ Microbiol 19(12), 2017
PMID: 29105249
Niche Partitioning of the N Cycling Microbial Community of an Offshore Oxygen Deficient Zone.
Fuchsman CA, Devol AH, Saunders JK, McKay C, Rocap G., Front Microbiol 8(), 2017
PMID: 29259587
Fuchsman CA, Devol AH, Saunders JK, McKay C, Rocap G., Front Microbiol 8(), 2017
PMID: 29259587
Timescales of Oxygenation Following the Evolution of Oxygenic Photosynthesis.
Ward LM, Kirschvink JL, Fischer WW., Orig Life Evol Biosph 46(1), 2016
PMID: 26286084
Ward LM, Kirschvink JL, Fischer WW., Orig Life Evol Biosph 46(1), 2016
PMID: 26286084
Environmental evaluation of coexistence of denitrifying anaerobic methane-oxidizing archaea and bacteria in a paddy field.
Ding J, Fu L, Ding ZW, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26394860
Ding J, Fu L, Ding ZW, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26394860
Silver nanoparticles in aquatic environments: Physiochemical behavior and antimicrobial mechanisms.
Zhang C, Hu Z, Deng B., Water Res 88(), 2016
PMID: 26519626
Zhang C, Hu Z, Deng B., Water Res 88(), 2016
PMID: 26519626
Nitrite-dependent anaerobic methane oxidizing bacteria along the water level fluctuation zone of the Three Gorges Reservoir.
Wang Y, Huang P, Ye F, Jiang Y, Song L, Op den Camp HJ, Zhu G, Wu S., Appl Microbiol Biotechnol 100(4), 2016
PMID: 26515563
Wang Y, Huang P, Ye F, Jiang Y, Song L, Op den Camp HJ, Zhu G, Wu S., Appl Microbiol Biotechnol 100(4), 2016
PMID: 26515563
Iron reduction in the DAMO/Shewanella oneidensis MR-1 coculture system and the fate of Fe(II).
Fu L, Li SW, Ding ZW, Ding J, Lu YZ, Zeng RJ., Water Res 88(), 2016
PMID: 26599434
Fu L, Li SW, Ding ZW, Ding J, Lu YZ, Zeng RJ., Water Res 88(), 2016
PMID: 26599434
Achieving complete nitrogen removal by coupling nitritation-anammox and methane-dependent denitrification: A model-based study.
Chen X, Guo J, Xie GJ, Yuan Z, Ni BJ., Biotechnol Bioeng 113(5), 2016
PMID: 26498000
Chen X, Guo J, Xie GJ, Yuan Z, Ni BJ., Biotechnol Bioeng 113(5), 2016
PMID: 26498000
Anaerobic oxidation of methane associated with sulfate reduction in a natural freshwater gas source.
Timmers PH, Suarez-Zuluaga DA, van Rossem M, Diender M, Stams AJ, Plugge CM., ISME J 10(6), 2016
PMID: 26636551
Timmers PH, Suarez-Zuluaga DA, van Rossem M, Diender M, Stams AJ, Plugge CM., ISME J 10(6), 2016
PMID: 26636551
Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology.
Oulas A, Polymenakou PN, Seshadri R, Tripp HJ, Mandalakis M, Paez-Espino AD, Pati A, Chain P, Nomikou P, Carey S, Kilias S, Christakis C, Kotoulas G, Magoulas A, Ivanova NN, Kyrpides NC., Environ Microbiol 18(4), 2016
PMID: 26487573
Oulas A, Polymenakou PN, Seshadri R, Tripp HJ, Mandalakis M, Paez-Espino AD, Pati A, Chain P, Nomikou P, Carey S, Kilias S, Christakis C, Kotoulas G, Magoulas A, Ivanova NN, Kyrpides NC., Environ Microbiol 18(4), 2016
PMID: 26487573
The role of biology in planetary evolution: cyanobacterial primary production in low-oxygen Proterozoic oceans.
Hamilton TL, Bryant DA, Macalady JL., Environ Microbiol 18(2), 2016
PMID: 26549614
Hamilton TL, Bryant DA, Macalady JL., Environ Microbiol 18(2), 2016
PMID: 26549614
Microbial and Functional Diversity within the Phyllosphere of Espeletia Species in an Andean High-Mountain Ecosystem.
Ruiz-Pérez CA, Restrepo S, Zambrano MM., Appl Environ Microbiol 82(6), 2016
PMID: 26746719
Ruiz-Pérez CA, Restrepo S, Zambrano MM., Appl Environ Microbiol 82(6), 2016
PMID: 26746719
Methanogens rapidly transition from methane production to iron reduction.
Sivan O, Shusta SS, Valentine DL., Geobiology 14(2), 2016
PMID: 26762691
Sivan O, Shusta SS, Valentine DL., Geobiology 14(2), 2016
PMID: 26762691
A TonB-Dependent Transporter Is Responsible for Methanobactin Uptake by Methylosinus trichosporium OB3b.
Gu W, Farhan Ul Haque M, Baral BS, Turpin EA, Bandow NL, Kremmer E, Flatley A, Zischka H, DiSpirito AA, Semrau JD., Appl Environ Microbiol 82(6), 2016
PMID: 26773085
Gu W, Farhan Ul Haque M, Baral BS, Turpin EA, Bandow NL, Kremmer E, Flatley A, Zischka H, DiSpirito AA, Semrau JD., Appl Environ Microbiol 82(6), 2016
PMID: 26773085
Reconstructing ecosystem functions of the active microbial community of the Baltic Sea oxygen depleted sediments.
Thureborn P, Franzetti A, Lundin D, Sjöling S., PeerJ 4(), 2016
PMID: 26823996
Thureborn P, Franzetti A, Lundin D, Sjöling S., PeerJ 4(), 2016
PMID: 26823996
The Origin of Life in Alkaline Hydrothermal Vents.
Sojo V, Herschy B, Whicher A, Camprubí E, Lane N., Astrobiology 16(2), 2016
PMID: 26841066
Sojo V, Herschy B, Whicher A, Camprubí E, Lane N., Astrobiology 16(2), 2016
PMID: 26841066
Evolution of the microbial community of the biofilm in a methane-based membrane biofilm reactor reducing multiple electron acceptors.
Chen R, Luo YH, Chen JX, Zhang Y, Wen LL, Shi LD, Tang Y, Rittmann BE, Zheng P, Zhao HP., Environ Sci Pollut Res Int 23(10), 2016
PMID: 26841777
Chen R, Luo YH, Chen JX, Zhang Y, Wen LL, Shi LD, Tang Y, Rittmann BE, Zheng P, Zhao HP., Environ Sci Pollut Res Int 23(10), 2016
PMID: 26841777
NC10 bacteria in marine oxygen minimum zones.
Padilla CC, Bristow LA, Sarode N, Garcia-Robledo E, Gómez Ramírez E, Benson CR, Bourbonnais A, Altabet MA, Girguis PR, Thamdrup B, Stewart FJ., ISME J 10(8), 2016
PMID: 26918666
Padilla CC, Bristow LA, Sarode N, Garcia-Robledo E, Gómez Ramírez E, Benson CR, Bourbonnais A, Altabet MA, Girguis PR, Thamdrup B, Stewart FJ., ISME J 10(8), 2016
PMID: 26918666
Methanobactin and the Link between Copper and Bacterial Methane Oxidation.
DiSpirito AA, Semrau JD, Murrell JC, Gallagher WH, Dennison C, Vuilleumier S., Microbiol Mol Biol Rev 80(2), 2016
PMID: 26984926
DiSpirito AA, Semrau JD, Murrell JC, Gallagher WH, Dennison C, Vuilleumier S., Microbiol Mol Biol Rev 80(2), 2016
PMID: 26984926
Improved PCR primers to amplify 16S rRNA genes from NC10 bacteria.
He Z, Wang J, Hu J, Zhang H, Cai C, Shen J, Xu X, Zheng P, Hu B., Appl Microbiol Biotechnol 100(11), 2016
PMID: 27020287
He Z, Wang J, Hu J, Zhang H, Cai C, Shen J, Xu X, Zheng P, Hu B., Appl Microbiol Biotechnol 100(11), 2016
PMID: 27020287
Experimental evaluation of the metabolic reversibility of ANME-2d between anaerobic methane oxidation and methanogenesis.
Ding J, Fu L, Ding ZW, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 100(14), 2016
PMID: 27026178
Ding J, Fu L, Ding ZW, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 100(14), 2016
PMID: 27026178
Alpha- and Gammaproteobacterial Methanotrophs Codominate the Active Methane-Oxidizing Communities in an Acidic Boreal Peat Bog.
Esson KC, Lin X, Kumaresan D, Chanton JP, Murrell JC, Kostka JE., Appl Environ Microbiol 82(8), 2016
PMID: 26873322
Esson KC, Lin X, Kumaresan D, Chanton JP, Murrell JC, Kostka JE., Appl Environ Microbiol 82(8), 2016
PMID: 26873322
Presence of diverse Candidatus Methylomirabilis oxyfera-like bacteria of NC10 phylum in agricultural soils.
Shen LD, Wu HS, Gao ZQ, Li J, Liu X., J Appl Microbiol 120(6), 2016
PMID: 26932395
Shen LD, Wu HS, Gao ZQ, Li J, Liu X., J Appl Microbiol 120(6), 2016
PMID: 26932395
Insights into microbial diversity in wastewater treatment systems: How far have we come?
Ferrera I, Sánchez O., Biotechnol Adv 34(5), 2016
PMID: 27071535
Ferrera I, Sánchez O., Biotechnol Adv 34(5), 2016
PMID: 27071535
Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.
Edgcomb VP, Pachiadaki MG, Mara P, Kormas KA, Leadbetter ER, Bernhard JM., ISME J 10(11), 2016
PMID: 27093045
Edgcomb VP, Pachiadaki MG, Mara P, Kormas KA, Leadbetter ER, Bernhard JM., ISME J 10(11), 2016
PMID: 27093045
Model-Based Feasibility Assessment of Membrane Biofilm Reactor to Achieve Simultaneous Ammonium, Dissolved Methane, and Sulfide Removal from Anaerobic Digestion Liquor.
Chen X, Liu Y, Peng L, Yuan Z, Ni BJ., Sci Rep 6(), 2016
PMID: 27112502
Chen X, Liu Y, Peng L, Yuan Z, Ni BJ., Sci Rep 6(), 2016
PMID: 27112502
Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp.
Palomo A, Jane Fowler S, Gülay A, Rasmussen S, Sicheritz-Ponten T, Smets BF., ISME J 10(11), 2016
PMID: 27128989
Palomo A, Jane Fowler S, Gülay A, Rasmussen S, Sicheritz-Ponten T, Smets BF., ISME J 10(11), 2016
PMID: 27128989
Enzymatic Antioxidant Systems in Early Anaerobes: Theoretical Considerations.
Ślesak I, Ślesak H, Zimak-Piekarczyk P, Rozpądek P., Astrobiology 16(5), 2016
PMID: 27176812
Ślesak I, Ślesak H, Zimak-Piekarczyk P, Rozpądek P., Astrobiology 16(5), 2016
PMID: 27176812
Methane dependent denitrification- from ecosystem to laboratory-scale enrichment for engineering applications.
Bhattacharjee AS, Motlagh AM, Jetten MSM, Goel R., Water Res 99(), 2016
PMID: 27176548
Bhattacharjee AS, Motlagh AM, Jetten MSM, Goel R., Water Res 99(), 2016
PMID: 27176548
Comparison of community structures of Candidatus Methylomirabilis oxyfera-like bacteria of NC10 phylum in different freshwater habitats.
Shen LD, Wu HS, Gao ZQ, Liu X, Li J., Sci Rep 6(), 2016
PMID: 27157928
Shen LD, Wu HS, Gao ZQ, Liu X, Li J., Sci Rep 6(), 2016
PMID: 27157928
Anaerobic methane oxidation coupled to nitrite reduction can be a potential methane sink in coastal environments.
Shen LD, Hu BL, Liu S, Chai XP, He ZF, Ren HX, Liu Y, Geng S, Wang W, Tang JL, Wang YM, Lou LP, Xu XY, Zheng P., Appl Microbiol Biotechnol 100(16), 2016
PMID: 27225473
Shen LD, Hu BL, Liu S, Chai XP, He ZF, Ren HX, Liu Y, Geng S, Wang W, Tang JL, Wang YM, Lou LP, Xu XY, Zheng P., Appl Microbiol Biotechnol 100(16), 2016
PMID: 27225473
Diversity and Distribution of Prokaryotes within a Shallow-Water Pockmark Field.
Giovannelli D, d'Errico G, Fiorentino F, Fattorini D, Regoli F, Angeletti L, Bakran-Petricioli T, Vetriani C, Yücel M, Taviani M, Manini E., Front Microbiol 7(), 2016
PMID: 27379070
Giovannelli D, d'Errico G, Fiorentino F, Fattorini D, Regoli F, Angeletti L, Bakran-Petricioli T, Vetriani C, Yücel M, Taviani M, Manini E., Front Microbiol 7(), 2016
PMID: 27379070
A Modified SDS-Based DNA Extraction Method for High Quality Environmental DNA from Seafloor Environments.
Natarajan VP, Zhang X, Morono Y, Inagaki F, Wang F., Front Microbiol 7(), 2016
PMID: 27446026
Natarajan VP, Zhang X, Morono Y, Inagaki F, Wang F., Front Microbiol 7(), 2016
PMID: 27446026
Cr(VI) reduction coupled with anaerobic oxidation of methane in a laboratory reactor.
Lu YZ, Fu L, Ding J, Ding ZW, Li N, Zeng RJ., Water Res 102(), 2016
PMID: 27395029
Lu YZ, Fu L, Ding J, Ding ZW, Li N, Zeng RJ., Water Res 102(), 2016
PMID: 27395029
Targeting tumor hypoxia with the epigenetic anticancer agent, RRx-001: a superagonist of nitric oxide generation.
Fens MH, Cabrales P, Scicinski J, Larkin SK, Suh JH, Kuypers FA, Oronsky N, Lybeck M, Oronsky A, Oronsky B., Med Oncol 33(8), 2016
PMID: 27377482
Fens MH, Cabrales P, Scicinski J, Larkin SK, Suh JH, Kuypers FA, Oronsky N, Lybeck M, Oronsky A, Oronsky B., Med Oncol 33(8), 2016
PMID: 27377482
The Microbial Olympics 2016.
Nelson MB, Chase AB, Martiny JB, Stocker R, Nguyen J, Lloyd K, Oshiro RT, Kearns DB, Schneider JP, Ringel PD, Basler M, Olson CA, Vuong HE, Hsiao EY, Roller BR, Ackermann M, Smillie C, Chien D, Alm E, Jermy AJ., Nat Microbiol 1(8), 2016
PMID: 27573121
Nelson MB, Chase AB, Martiny JB, Stocker R, Nguyen J, Lloyd K, Oshiro RT, Kearns DB, Schneider JP, Ringel PD, Basler M, Olson CA, Vuong HE, Hsiao EY, Roller BR, Ackermann M, Smillie C, Chien D, Alm E, Jermy AJ., Nat Microbiol 1(8), 2016
PMID: 27573121
Biotic Interactions in Microbial Communities as Modulators of Biogeochemical Processes: Methanotrophy as a Model System.
Ho A, Angel R, Veraart AJ, Daebeler A, Jia Z, Kim SY, Kerckhof FM, Boon N, Bodelier PL., Front Microbiol 7(), 2016
PMID: 27602021
Ho A, Angel R, Veraart AJ, Daebeler A, Jia Z, Kim SY, Kerckhof FM, Boon N, Bodelier PL., Front Microbiol 7(), 2016
PMID: 27602021
Methane production, oxidation and mitigation: A mechanistic understanding and comprehensive evaluation of influencing factors.
Malyan SK, Bhatia A, Kumar A, Gupta DK, Singh R, Kumar SS, Tomer R, Kumar O, Jain N., Sci Total Environ 572(), 2016
PMID: 27575427
Malyan SK, Bhatia A, Kumar A, Gupta DK, Singh R, Kumar SS, Tomer R, Kumar O, Jain N., Sci Total Environ 572(), 2016
PMID: 27575427
A novel denitrifying methanotroph of the NC10 phylum and its microcolony.
He Z, Cai C, Wang J, Xu X, Zheng P, Jetten MS, Hu B., Sci Rep 6(), 2016
PMID: 27582299
He Z, Cai C, Wang J, Xu X, Zheng P, Jetten MS, Hu B., Sci Rep 6(), 2016
PMID: 27582299
Regional Variation of CH4 and N2 Production Processes in the Deep Aquifers of an Accretionary Prism.
Matsushita M, Ishikawa S, Nagai K, Hirata Y, Ozawa K, Mitsunobu S, Kimura H., Microbes Environ 31(3), 2016
PMID: 27592518
Matsushita M, Ishikawa S, Nagai K, Hirata Y, Ozawa K, Mitsunobu S, Kimura H., Microbes Environ 31(3), 2016
PMID: 27592518
Wide Distribution of Genes for Tetrahydromethanopterin/Methanofuran-Linked C1 Transfer Reactions Argues for Their Presence in the Common Ancestor of Bacteria and Archaea.
Chistoserdova L., Front Microbiol 7(), 2016
PMID: 27679616
Chistoserdova L., Front Microbiol 7(), 2016
PMID: 27679616
Effects of salinity on simultaneous reduction of perchlorate and nitrate in a methane-based membrane biofilm reactor.
Zhang Y, Chen JX, Wen LL, Tang Y, Zhao HP., Environ Sci Pollut Res Int 23(23), 2016
PMID: 27646453
Zhang Y, Chen JX, Wen LL, Tang Y, Zhao HP., Environ Sci Pollut Res Int 23(23), 2016
PMID: 27646453
Current advances in molecular methods for detection of nitrite-dependent anaerobic methane oxidizing bacteria in natural environments.
Chen J, Dick R, Lin JG, Gu JD., Appl Microbiol Biotechnol 100(23), 2016
PMID: 27761639
Chen J, Dick R, Lin JG, Gu JD., Appl Microbiol Biotechnol 100(23), 2016
PMID: 27761639
Archaea catalyze iron-dependent anaerobic oxidation of methane.
Ettwig KF, Zhu B, Speth D, Keltjens JT, Jetten MSM, Kartal B., Proc Natl Acad Sci U S A 113(45), 2016
PMID: 27791118
Ettwig KF, Zhu B, Speth D, Keltjens JT, Jetten MSM, Kartal B., Proc Natl Acad Sci U S A 113(45), 2016
PMID: 27791118
[Microbiotes and metagenomics].
Weissenbach J, Sghir A., Med Sci (Paris) 32(11), 2016
PMID: 28008833
Weissenbach J, Sghir A., Med Sci (Paris) 32(11), 2016
PMID: 28008833
Ultrastructure and Viral Metagenome of Bacteriophages from an Anaerobic Methane Oxidizing Methylomirabilis Bioreactor Enrichment Culture.
Gambelli L, Cremers G, Mesman R, Guerrero S, Dutilh BE, Jetten MS, Op den Camp HJ, van Niftrik L., Front Microbiol 7(), 2016
PMID: 27877158
Gambelli L, Cremers G, Mesman R, Guerrero S, Dutilh BE, Jetten MS, Op den Camp HJ, van Niftrik L., Front Microbiol 7(), 2016
PMID: 27877158
Nitrate- and nitrite-dependent anaerobic oxidation of methane.
Welte CU, Rasigraf O, Vaksmaa A, Versantvoort W, Arshad A, Op den Camp HJ, Jetten MS, Lüke C, Reimann J., Environ Microbiol Rep 8(6), 2016
PMID: 27753265
Welte CU, Rasigraf O, Vaksmaa A, Versantvoort W, Arshad A, Op den Camp HJ, Jetten MS, Lüke C, Reimann J., Environ Microbiol Rep 8(6), 2016
PMID: 27753265
Methanotrophy under Versatile Conditions in the Water Column of the Ferruginous Meromictic Lake La Cruz (Spain).
Oswald K, Jegge C, Tischer J, Berg J, Brand A, Miracle MR, Soria X, Vicente E, Lehmann MF, Zopfi J, Schubert CJ., Front Microbiol 7(), 2016
PMID: 27891115
Oswald K, Jegge C, Tischer J, Berg J, Brand A, Miracle MR, Soria X, Vicente E, Lehmann MF, Zopfi J, Schubert CJ., Front Microbiol 7(), 2016
PMID: 27891115
Responses of Methanogenic and Methanotrophic Communities to Elevated Atmospheric CO2 and Temperature in a Paddy Field.
Liu Y, Liu X, Cheng K, Li L, Zhang X, Zheng J, Zheng J, Pan G., Front Microbiol 7(), 2016
PMID: 27933055
Liu Y, Liu X, Cheng K, Li L, Zhang X, Zheng J, Zheng J, Pan G., Front Microbiol 7(), 2016
PMID: 27933055
Metagenomic analysis reveals the contribution of anaerobic methanotroph-1b in the oxidation of methane at the Ulleung Basin, East Sea of Korea.
Lee JW, Kwon KK, Bahk JJ, Lee DH, Lee HS, Kang SG, Lee JH., J Microbiol 54(12), 2016
PMID: 27888460
Lee JW, Kwon KK, Bahk JJ, Lee DH, Lee HS, Kang SG, Lee JH., J Microbiol 54(12), 2016
PMID: 27888460
Effect of inoculum sources on the enrichment of nitrite-dependent anaerobic methane-oxidizing bacteria.
He Z, Cai C, Shen L, Lou L, Zheng P, Xu X, Hu B., Appl Microbiol Biotechnol 99(2), 2015
PMID: 25186148
He Z, Cai C, Shen L, Lou L, Zheng P, Xu X, Hu B., Appl Microbiol Biotechnol 99(2), 2015
PMID: 25186148
Whale-fall ecosystems: recent insights into ecology, paleoecology, and evolution.
Smith CR, Glover AG, Treude T, Higgs ND, Amon DJ., Ann Rev Mar Sci 7(), 2015
PMID: 25251277
Smith CR, Glover AG, Treude T, Higgs ND, Amon DJ., Ann Rev Mar Sci 7(), 2015
PMID: 25251277
Complex community of nitrite-dependent anaerobic methane oxidation bacteria in coastal sediments of the Mai Po wetland by PCR amplification of both 16S rRNA and pmoA genes.
Chen J, Zhou Z, Gu JD., Appl Microbiol Biotechnol 99(3), 2015
PMID: 25219532
Chen J, Zhou Z, Gu JD., Appl Microbiol Biotechnol 99(3), 2015
PMID: 25219532
Vertical distribution of nitrite-dependent anaerobic methane-oxidising bacteria in natural freshwater wetland soils.
Shen LD, Huang Q, He ZF, Lian X, Liu S, He YF, Lou LP, Xu XY, Zheng P, Hu BL., Appl Microbiol Biotechnol 99(1), 2015
PMID: 25242345
Shen LD, Huang Q, He ZF, Lian X, Liu S, He YF, Lou LP, Xu XY, Zheng P, Hu BL., Appl Microbiol Biotechnol 99(1), 2015
PMID: 25242345
Field-scale tracking of active methane-oxidizing communities in a landfill cover soil reveals spatial and seasonal variability.
Henneberger R, Chiri E, Bodelier PE, Frenzel P, Lüke C, Schroth MH., Environ Microbiol 17(5), 2015
PMID: 25186436
Henneberger R, Chiri E, Bodelier PE, Frenzel P, Lüke C, Schroth MH., Environ Microbiol 17(5), 2015
PMID: 25186436
Methane-fed microbial microcosms show differential community dynamics and pinpoint taxa involved in communal response.
Oshkin IY, Beck DA, Lamb AE, Tchesnokova V, Benuska G, McTaggart TL, Kalyuzhnaya MG, Dedysh SN, Lidstrom ME, Chistoserdova L., ISME J 9(5), 2015
PMID: 25333464
Oshkin IY, Beck DA, Lamb AE, Tchesnokova V, Benuska G, McTaggart TL, Kalyuzhnaya MG, Dedysh SN, Lidstrom ME, Chistoserdova L., ISME J 9(5), 2015
PMID: 25333464
Aerobic and nitrite-dependent methane-oxidizing microorganisms in sediments of freshwater lakes on the Yunnan Plateau.
Liu Y, Zhang J, Zhao L, Li Y, Yang Y, Xie S., Appl Microbiol Biotechnol 99(5), 2015
PMID: 25698510
Liu Y, Zhang J, Zhao L, Li Y, Yang Y, Xie S., Appl Microbiol Biotechnol 99(5), 2015
PMID: 25698510
Distribution and environmental significance of nitrite-dependent anaerobic methane-oxidising bacteria in natural ecosystems.
Shen LD, Wu HS, Gao ZQ., Appl Microbiol Biotechnol 99(1), 2015
PMID: 25398284
Shen LD, Wu HS, Gao ZQ., Appl Microbiol Biotechnol 99(1), 2015
PMID: 25398284
Methane oxidation by anaerobic archaea for conversion to liquid fuels.
Mueller TJ, Grisewood MJ, Nazem-Bokaee H, Gopalakrishnan S, Ferry JG, Wood TK, Maranas CD., J Ind Microbiol Biotechnol 42(3), 2015
PMID: 25427790
Mueller TJ, Grisewood MJ, Nazem-Bokaee H, Gopalakrishnan S, Ferry JG, Wood TK, Maranas CD., J Ind Microbiol Biotechnol 42(3), 2015
PMID: 25427790
Methylobacterium extorquens: methylotrophy and biotechnological applications.
Ochsner AM, Sonntag F, Buchhaupt M, Schrader J, Vorholt JA., Appl Microbiol Biotechnol 99(2), 2015
PMID: 25432674
Ochsner AM, Sonntag F, Buchhaupt M, Schrader J, Vorholt JA., Appl Microbiol Biotechnol 99(2), 2015
PMID: 25432674
Biogeographical distribution of denitrifying anaerobic methane oxidizing bacteria in Chinese wetland ecosystems.
Zhu G, Zhou L, Wang Y, Wang S, Guo J, Long XE, Sun X, Jiang B, Hou Q, Jetten MS, Yin C., Environ Microbiol Rep 7(1), 2015
PMID: 25223900
Zhu G, Zhou L, Wang Y, Wang S, Guo J, Long XE, Sun X, Jiang B, Hou Q, Jetten MS, Yin C., Environ Microbiol Rep 7(1), 2015
PMID: 25223900
Systems-based approaches to unravel multi-species microbial community functioning.
Abram F., Comput Struct Biotechnol J 13(), 2015
PMID: 25750697
Abram F., Comput Struct Biotechnol J 13(), 2015
PMID: 25750697
Detection and diversity of copper containing nitrite reductase genes (nirK) in prokaryotic and fungal communities of agricultural soils.
Long A, Song B, Fridey K, Silva A., FEMS Microbiol Ecol 91(2), 2015
PMID: 25764542
Long A, Song B, Fridey K, Silva A., FEMS Microbiol Ecol 91(2), 2015
PMID: 25764542
Nitrite-dependent anaerobic methane-oxidising bacteria: unique microorganisms with special properties.
Shen LD, He ZF, Wu HS, Gao ZQ., Curr Microbiol 70(4), 2015
PMID: 25519694
Shen LD, He ZF, Wu HS, Gao ZQ., Curr Microbiol 70(4), 2015
PMID: 25519694
Anaerobic oxidation of methane: an "active" microbial process.
Cui M, Ma A, Qi H, Zhuang X, Zhuang G., Microbiologyopen 4(1), 2015
PMID: 25530008
Cui M, Ma A, Qi H, Zhuang X, Zhuang G., Microbiologyopen 4(1), 2015
PMID: 25530008
Implications of Downstream Nitrate Dosage in anaerobic sewers to control sulfide and methane emissions.
Auguet O, Pijuan M, Guasch-Balcells H, Borrego CM, Gutierrez O., Water Res 68(), 2015
PMID: 25462758
Auguet O, Pijuan M, Guasch-Balcells H, Borrego CM, Gutierrez O., Water Res 68(), 2015
PMID: 25462758
The short- and long-term effects of environmental conditions on anaerobic methane oxidation coupled to nitrite reduction.
He Z, Geng S, Shen L, Lou L, Zheng P, Xu X, Hu B., Water Res 68(), 2015
PMID: 25462761
He Z, Geng S, Shen L, Lou L, Zheng P, Xu X, Hu B., Water Res 68(), 2015
PMID: 25462761
Selective Pressure of Temperature on Competition and Cross-Feeding within Denitrifying and Fermentative Microbial Communities.
Hanke A, Berg J, Hargesheimer T, Tegetmeyer HE, Sharp CE, Strous M., Front Microbiol 6(), 2015
PMID: 26779132
Hanke A, Berg J, Hargesheimer T, Tegetmeyer HE, Sharp CE, Strous M., Front Microbiol 6(), 2015
PMID: 26779132
Methane sources in arctic thermokarst lake sediments on the North Slope of Alaska.
Matheus Carnevali PB, Rohrssen M, Williams MR, Michaud AB, Adams H, Berisford D, Love GD, Priscu JC, Rassuchine O, Hand KP, Murray AE., Geobiology 13(2), 2015
PMID: 25612141
Matheus Carnevali PB, Rohrssen M, Williams MR, Michaud AB, Adams H, Berisford D, Love GD, Priscu JC, Rassuchine O, Hand KP, Murray AE., Geobiology 13(2), 2015
PMID: 25612141
Methanobactin from Methylocystis sp. strain SB2 affects gene expression and methane monooxygenase activity in Methylosinus trichosporium OB3b.
Farhan Ul-Haque M, Kalidass B, Vorobev A, Baral BS, DiSpirito AA, Semrau JD., Appl Environ Microbiol 81(7), 2015
PMID: 25616801
Farhan Ul-Haque M, Kalidass B, Vorobev A, Baral BS, DiSpirito AA, Semrau JD., Appl Environ Microbiol 81(7), 2015
PMID: 25616801
XoxF-type methanol dehydrogenase from the anaerobic methanotroph “Candidatus Methylomirabilis oxyfera”.
Wu ML, Wessels JC, Pol A, Op den Camp HJ, Jetten MS, van Niftrik L., Appl Environ Microbiol 81(4), 2015
PMID: 25527536
Wu ML, Wessels JC, Pol A, Op den Camp HJ, Jetten MS, van Niftrik L., Appl Environ Microbiol 81(4), 2015
PMID: 25527536
Rapid Reactivation of Deep Subsurface Microbes in the Presence of C-1 Compounds.
Rajala P, Bomberg M, Kietäväinen R, Kukkonen I, Ahonen L, Nyyssönen M, Itävaara M., Microorganisms 3(1), 2015
PMID: 27682076
Rajala P, Bomberg M, Kietäväinen R, Kukkonen I, Ahonen L, Nyyssönen M, Itävaara M., Microorganisms 3(1), 2015
PMID: 27682076
Methane oxidation coupled to oxygenic photosynthesis in anoxic waters.
Milucka J, Kirf M, Lu L, Krupke A, Lam P, Littmann S, Kuypers MM, Schubert CJ., ISME J 9(9), 2015
PMID: 25679533
Milucka J, Kirf M, Lu L, Krupke A, Lam P, Littmann S, Kuypers MM, Schubert CJ., ISME J 9(9), 2015
PMID: 25679533
In situ expression of nitrite-dependent anaerobic methane oxidation proteins by Candidatus Methylomirabilis oxyfera co-occurring with expressed anammox proteins in a contaminated aquifer.
Hanson BT, Madsen EL., Environ Microbiol Rep 7(2), 2015
PMID: 25403415
Hanson BT, Madsen EL., Environ Microbiol Rep 7(2), 2015
PMID: 25403415
A laboratory investigation of interactions between denitrifying anaerobic methane oxidation (DAMO) and anammox processes in anoxic environments.
Hu S, Zeng RJ, Haroon MF, Keller J, Lant PA, Tyson GW, Yuan Z., Sci Rep 5(), 2015
PMID: 25732131
Hu S, Zeng RJ, Haroon MF, Keller J, Lant PA, Tyson GW, Yuan Z., Sci Rep 5(), 2015
PMID: 25732131
Methane oxidation coupled to nitrate reduction under hypoxia by the Gammaproteobacterium Methylomonas denitrificans, sp. nov. type strain FJG1.
Kits KD, Klotz MG, Stein LY., Environ Microbiol 17(9), 2015
PMID: 25580993
Kits KD, Klotz MG, Stein LY., Environ Microbiol 17(9), 2015
PMID: 25580993
Global dispersion and local diversification of the methane seep microbiome.
Ruff SE, Biddle JF, Teske AP, Knittel K, Boetius A, Ramette A., Proc Natl Acad Sci U S A 112(13), 2015
PMID: 25775520
Ruff SE, Biddle JF, Teske AP, Knittel K, Boetius A, Ramette A., Proc Natl Acad Sci U S A 112(13), 2015
PMID: 25775520
Genomics of Methylotrophy in Gram-Positive Methylamine-Utilizing Bacteria.
McTaggart TL, Beck DA, Setboonsarng U, Shapiro N, Woyke T, Lidstrom ME, Kalyuzhnaya MG, Chistoserdova L., Microorganisms 3(1), 2015
PMID: 27682081
McTaggart TL, Beck DA, Setboonsarng U, Shapiro N, Woyke T, Lidstrom ME, Kalyuzhnaya MG, Chistoserdova L., Microorganisms 3(1), 2015
PMID: 27682081
(Per)chlorate-reducing bacteria can utilize aerobic and anaerobic pathways of aromatic degradation with (per)chlorate as an electron acceptor.
Carlström CI, Loutey D, Bauer S, Clark IC, Rohde RA, Iavarone AT, Lucas L, Coates JD., MBio 6(2), 2015
PMID: 25805732
Carlström CI, Loutey D, Bauer S, Clark IC, Rohde RA, Iavarone AT, Lucas L, Coates JD., MBio 6(2), 2015
PMID: 25805732
Can meta-omics help to establish causality between contaminant biotransformations and genes or gene products?
Johnson DR, Helbling DE, Men Y, Fenner K., Environ Sci (Camb) 1(3), 2015
PMID: 27239323
Johnson DR, Helbling DE, Men Y, Fenner K., Environ Sci (Camb) 1(3), 2015
PMID: 27239323
Metabolic methanol: molecular pathways and physiological roles.
Dorokhov YL, Shindyapina AV, Sheshukova EV, Komarova TV., Physiol Rev 95(2), 2015
PMID: 25834233
Dorokhov YL, Shindyapina AV, Sheshukova EV, Komarova TV., Physiol Rev 95(2), 2015
PMID: 25834233
The changing landscape of microbial biodiversity exploration and its implications for systematics.
Hedlund BP, Dodsworth JA, Staley JT., Syst Appl Microbiol 38(4), 2015
PMID: 25921438
Hedlund BP, Dodsworth JA, Staley JT., Syst Appl Microbiol 38(4), 2015
PMID: 25921438
Interactions of Methylotrophs with Plants and Other Heterotrophic Bacteria.
Iguchi H, Yurimoto H, Sakai Y., Microorganisms 3(2), 2015
PMID: 27682083
Iguchi H, Yurimoto H, Sakai Y., Microorganisms 3(2), 2015
PMID: 27682083
Patterns in wetland microbial community composition and functional gene repertoire associated with methane emissions.
He S, Malfatti SA, McFarland JW, Anderson FE, Pati A, Huntemann M, Tremblay J, Glavina del Rio T, Waldrop MP, Windham-Myers L, Tringe SG., MBio 6(3), 2015
PMID: 25991679
He S, Malfatti SA, McFarland JW, Anderson FE, Pati A, Huntemann M, Tremblay J, Glavina del Rio T, Waldrop MP, Windham-Myers L, Tringe SG., MBio 6(3), 2015
PMID: 25991679
The role of paraffin oil on the interaction between denitrifying anaerobic methane oxidation and Anammox processes.
Fu L, Ding ZW, Ding J, Zhang F, Zeng RJ., Appl Microbiol Biotechnol 99(19), 2015
PMID: 26036704
Fu L, Ding ZW, Ding J, Zhang F, Zeng RJ., Appl Microbiol Biotechnol 99(19), 2015
PMID: 26036704
Anaerobic Oxidation of Methane Coupled to Nitrite Reduction by Halophilic Marine NC10 Bacteria.
He Z, Geng S, Cai C, Liu S, Liu Y, Pan Y, Lou L, Zheng P, Xu X, Hu B., Appl Environ Microbiol 81(16), 2015
PMID: 26048927
He Z, Geng S, Cai C, Liu S, Liu Y, Pan Y, Lou L, Zheng P, Xu X, Hu B., Appl Environ Microbiol 81(16), 2015
PMID: 26048927
Methylotrophs in natural habitats: current insights through metagenomics.
Chistoserdova L., Appl Microbiol Biotechnol 99(14), 2015
PMID: 26051673
Chistoserdova L., Appl Microbiol Biotechnol 99(14), 2015
PMID: 26051673
XoxF encoding an alternative methanol dehydrogenase is widespread in coastal marine environments.
Taubert M, Grob C, Howat AM, Burns OJ, Dixon JL, Chen Y, Murrell JC., Environ Microbiol 17(10), 2015
PMID: 25943904
Taubert M, Grob C, Howat AM, Burns OJ, Dixon JL, Chen Y, Murrell JC., Environ Microbiol 17(10), 2015
PMID: 25943904
High resolution depth distribution of Bacteria, Archaea, methanotrophs, and methanogens in the bulk and rhizosphere soils of a flooded rice paddy.
Lee HJ, Jeong SE, Kim PJ, Madsen EL, Jeon CO., Front Microbiol 6(), 2015
PMID: 26161079
Lee HJ, Jeong SE, Kim PJ, Madsen EL, Jeon CO., Front Microbiol 6(), 2015
PMID: 26161079
High rates of anaerobic methane oxidation in freshwater wetlands reduce potential atmospheric methane emissions.
Segarra KE, Schubotz F, Samarkin V, Yoshinaga MY, Hinrichs KU, Joye SB., Nat Commun 6(), 2015
PMID: 26123199
Segarra KE, Schubotz F, Samarkin V, Yoshinaga MY, Hinrichs KU, Joye SB., Nat Commun 6(), 2015
PMID: 26123199
The origin, source, and cycling of methane in deep crystalline rock biosphere.
Kietäväinen R, Purkamo L., Front Microbiol 6(), 2015
PMID: 26236303
Kietäväinen R, Purkamo L., Front Microbiol 6(), 2015
PMID: 26236303
Light-Dependent Aerobic Methane Oxidation Reduces Methane Emissions from Seasonally Stratified Lakes.
Oswald K, Milucka J, Brand A, Littmann S, Wehrli B, Kuypers MM, Schubert CJ., PLoS One 10(7), 2015
PMID: 26193458
Oswald K, Milucka J, Brand A, Littmann S, Wehrli B, Kuypers MM, Schubert CJ., PLoS One 10(7), 2015
PMID: 26193458
Improvement of the trace metal composition of medium for nitrite-dependent anaerobic methane oxidation bacteria: Iron (II) and copper (II) make a difference.
He Z, Geng S, Pan Y, Cai C, Wang J, Wang L, Liu S, Zheng P, Xu X, Hu B., Water Res 85(), 2015
PMID: 26340061
He Z, Geng S, Pan Y, Cai C, Wang J, Wang L, Liu S, Zheng P, Xu X, Hu B., Water Res 85(), 2015
PMID: 26340061
New primers for detecting and quantifying denitrifying anaerobic methane oxidation archaea in different ecological niches.
Ding J, Ding ZW, Fu L, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 99(22), 2015
PMID: 26300291
Ding J, Ding ZW, Fu L, Lu YZ, Cheng SH, Zeng RJ., Appl Microbiol Biotechnol 99(22), 2015
PMID: 26300291
A new approach to simultaneous ammonium and dissolved methane removal from anaerobic digestion liquor: A model-based investigation of feasibility.
Chen X, Guo J, Xie GJ, Liu Y, Yuan Z, Ni BJ., Water Res 85(), 2015
PMID: 26342913
Chen X, Guo J, Xie GJ, Liu Y, Yuan Z, Ni BJ., Water Res 85(), 2015
PMID: 26342913
Nitrogen removal from wastewater by anaerobic methane-driven denitrification in a lab-scale reactor: heterotrophic denitrifiers associated with denitrifying methanotrophs.
He Z, Wang J, Zhang X, Cai C, Geng S, Zheng P, Xu X, Hu B., Appl Microbiol Biotechnol 99(24), 2015
PMID: 26342737
He Z, Wang J, Zhang X, Cai C, Geng S, Zheng P, Xu X, Hu B., Appl Microbiol Biotechnol 99(24), 2015
PMID: 26342737
Molecular Fingerprint and Dominant Environmental Factors of Nitrite-Dependent Anaerobic Methane-Oxidizing Bacteria in Sediments from the Yellow River Estuary, China.
Yan P, Li M, Wei G, Li H, Gao Z., PLoS One 10(9), 2015
PMID: 26368535
Yan P, Li M, Wei G, Li H, Gao Z., PLoS One 10(9), 2015
PMID: 26368535
Nitrate reduction by denitrifying anaerobic methane oxidizing microorganisms can reach a practically useful rate.
Cai C, Hu S, Guo J, Shi Y, Xie GJ, Yuan Z., Water Res 87(), 2015
PMID: 26414889
Cai C, Hu S, Guo J, Shi Y, Xie GJ, Yuan Z., Water Res 87(), 2015
PMID: 26414889
Metatranscriptomic analysis of a high-sulfide aquatic spring reveals insights into sulfur cycling and unexpected aerobic metabolism.
Spain AM, Elshahed MS, Najar FZ, Krumholz LR., PeerJ 3(), 2015
PMID: 26417542
Spain AM, Elshahed MS, Najar FZ, Krumholz LR., PeerJ 3(), 2015
PMID: 26417542
Design and evaluation of universal 16S rRNA gene primers for high-throughput sequencing to simultaneously detect DAMO microbes and anammox bacteria.
Lu YZ, Ding ZW, Ding J, Fu L, Zeng RJ., Water Res 87(), 2015
PMID: 26454634
Lu YZ, Ding ZW, Ding J, Fu L, Zeng RJ., Water Res 87(), 2015
PMID: 26454634
Microbial Response to Experimentally Controlled Redox Transitions at the Sediment Water Interface.
Frindte K, Allgaier M, Grossart HP, Eckert W., PLoS One 10(11), 2015
PMID: 26599000
Frindte K, Allgaier M, Grossart HP, Eckert W., PLoS One 10(11), 2015
PMID: 26599000
Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker.
Knief C., Front Microbiol 6(), 2015
PMID: 26696968
Knief C., Front Microbiol 6(), 2015
PMID: 26696968
A Metagenomics-Based Metabolic Model of Nitrate-Dependent Anaerobic Oxidation of Methane by Methanoperedens-Like Archaea.
Arshad A, Speth DR, de Graaf RM, Op den Camp HJ, Jetten MS, Welte CU., Front Microbiol 6(), 2015
PMID: 26733968
Arshad A, Speth DR, de Graaf RM, Op den Camp HJ, Jetten MS, Welte CU., Front Microbiol 6(), 2015
PMID: 26733968
Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation.
Skennerton CT, Ward LM, Michel A, Metcalfe K, Valiente C, Mullin S, Chan KY, Gradinaru V, Orphan VJ., Front Microbiol 6(), 2015
PMID: 26779119
Skennerton CT, Ward LM, Michel A, Metcalfe K, Valiente C, Mullin S, Chan KY, Gradinaru V, Orphan VJ., Front Microbiol 6(), 2015
PMID: 26779119
Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume.
Li M, Jain S, Baker BJ, Taylor C, Dick GJ., Environ Microbiol 16(1), 2014
PMID: 23826624
Li M, Jain S, Baker BJ, Taylor C, Dick GJ., Environ Microbiol 16(1), 2014
PMID: 23826624
The (d)evolution of methanotrophy in the Beijerinckiaceae--a comparative genomics analysis.
Tamas I, Smirnova AV, He Z, Dunfield PF., ISME J 8(2), 2014
PMID: 23985741
Tamas I, Smirnova AV, He Z, Dunfield PF., ISME J 8(2), 2014
PMID: 23985741
Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone.
Ganesh S, Parris DJ, DeLong EF, Stewart FJ., ISME J 8(1), 2014
PMID: 24030599
Ganesh S, Parris DJ, DeLong EF, Stewart FJ., ISME J 8(1), 2014
PMID: 24030599
Rare earth metals are essential for methanotrophic life in volcanic mudpots.
Pol A, Barends TR, Dietl A, Khadem AF, Eygensteyn J, Jetten MS, Op den Camp HJ., Environ Microbiol 16(1), 2014
PMID: 24034209
Pol A, Barends TR, Dietl A, Khadem AF, Eygensteyn J, Jetten MS, Op den Camp HJ., Environ Microbiol 16(1), 2014
PMID: 24034209
Sensitivity of methanotrophic community structure, abundance, and gene expression to CH4 and O2 in simulated landfill biocover soil.
Li H, Chi Z, Lu W, Wang H., Environ Pollut 184(), 2014
PMID: 24095811
Li H, Chi Z, Lu W, Wang H., Environ Pollut 184(), 2014
PMID: 24095811
Distribution and diversity of nitrite-dependent anaerobic methane-oxidising bacteria in the sediments of the Qiantang River.
Shen LD, Liu S, Zhu Q, Li XY, Cai C, Cheng DQ, Lou LP, Xu XY, Zheng P, Hu BL., Microb Ecol 67(2), 2014
PMID: 24272281
Shen LD, Liu S, Zhu Q, Li XY, Cai C, Cheng DQ, Lou LP, Xu XY, Zheng P, Hu BL., Microb Ecol 67(2), 2014
PMID: 24272281
Bacterial communities and syntrophic associations involved in anaerobic oxidation of methane process of the Sonora Margin cold seeps, Guaymas Basin.
Vigneron A, Cruaud P, Pignet P, Caprais JC, Gayet N, Cambon-Bonavita MA, Godfroy A, Toffin L., Environ Microbiol 16(9), 2014
PMID: 24238139
Vigneron A, Cruaud P, Pignet P, Caprais JC, Gayet N, Cambon-Bonavita MA, Godfroy A, Toffin L., Environ Microbiol 16(9), 2014
PMID: 24238139
Methane oxidation activity and diversity of aerobic methanotrophs in pH-neutral and semi-neutral thermal springs of the Kunashir Island, Russian Far East.
Kizilova AK, Sukhacheva MV, Pimenov NV, Yurkov AM, Kravchenko IK., Extremophiles 18(2), 2014
PMID: 24343375
Kizilova AK, Sukhacheva MV, Pimenov NV, Yurkov AM, Kravchenko IK., Extremophiles 18(2), 2014
PMID: 24343375
CH4 emission and conversion from A2O and SBR processes in full-scale wastewater treatment plants.
Liu Y, Cheng X, Lun X, Sun D., J Environ Sci (China) 26(1), 2014
PMID: 24649710
Liu Y, Cheng X, Lun X, Sun D., J Environ Sci (China) 26(1), 2014
PMID: 24649710
Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California.
Hawley ER, Piao H, Scott NM, Malfatti S, Pagani I, Huntemann M, Chen A, Glavina Del Rio T, Foster B, Copeland A, Jansson J, Pati A, Tringe S, Gilbert JA, Lorenson TD, Hess M., Stand Genomic Sci 9(3), 2014
PMID: 25197496
Hawley ER, Piao H, Scott NM, Malfatti S, Pagani I, Huntemann M, Chen A, Glavina Del Rio T, Foster B, Copeland A, Jansson J, Pati A, Tringe S, Gilbert JA, Lorenson TD, Hess M., Stand Genomic Sci 9(3), 2014
PMID: 25197496
Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity.
Hofbauer S, Gysel K, Bellei M, Hagmüller A, Schaffner I, Mlynek G, Kostan J, Pirker KF, Daims H, Furtmüller PG, Battistuzzi G, Djinović-Carugo K, Obinger C., Biochemistry 53(1), 2014
PMID: 24364531
Hofbauer S, Gysel K, Bellei M, Hagmüller A, Schaffner I, Mlynek G, Kostan J, Pirker KF, Daims H, Furtmüller PG, Battistuzzi G, Djinović-Carugo K, Obinger C., Biochemistry 53(1), 2014
PMID: 24364531
Methylomonas lenta sp. nov., a methanotroph isolated from manure and a denitrification tank.
Hoefman S, Heylen K, De Vos P., Int J Syst Evol Microbiol 64(pt 4), 2014
PMID: 24408530
Hoefman S, Heylen K, De Vos P., Int J Syst Evol Microbiol 64(pt 4), 2014
PMID: 24408530
The quest for a unified view of bacterial land colonization.
Wu H, Fang Y, Yu J, Zhang Z., ISME J 8(7), 2014
PMID: 24451209
Wu H, Fang Y, Yu J, Zhang Z., ISME J 8(7), 2014
PMID: 24451209
Aquatic plant surface as a niche for methanotrophs.
Yoshida N, Iguchi H, Yurimoto H, Murakami A, Sakai Y., Front Microbiol 5(), 2014
PMID: 24550901
Yoshida N, Iguchi H, Yurimoto H, Murakami A, Sakai Y., Front Microbiol 5(), 2014
PMID: 24550901
Methane emission and dynamics of methanotrophic and methanogenic communities in a flooded rice field ecosystem.
Lee HJ, Kim SY, Kim PJ, Madsen EL, Jeon CO., FEMS Microbiol Ecol 88(1), 2014
PMID: 24410836
Lee HJ, Kim SY, Kim PJ, Madsen EL, Jeon CO., FEMS Microbiol Ecol 88(1), 2014
PMID: 24410836
Autotrophic carbon dioxide fixation via the Calvin-Benson-Bassham cycle by the denitrifying methanotroph "Candidatus Methylomirabilis oxyfera".
Rasigraf O, Kool DM, Jetten MS, Sinninghe Damsté JS, Ettwig KF., Appl Environ Microbiol 80(8), 2014
PMID: 24509918
Rasigraf O, Kool DM, Jetten MS, Sinninghe Damsté JS, Ettwig KF., Appl Environ Microbiol 80(8), 2014
PMID: 24509918
Molecular evidence for nitrite-dependent anaerobic methane-oxidising bacteria in the Jiaojiang Estuary of the East Sea (China).
Li-Dong S, Qun Z, Shuai L, Ping D, Jiang-Ning Z, Dong-Qing C, Xiang-Yang X, Ping Z, Bao-Lan H., Appl Microbiol Biotechnol 98(11), 2014
PMID: 24515728
Li-Dong S, Qun Z, Shuai L, Ping D, Jiang-Ning Z, Dong-Qing C, Xiang-Yang X, Ping Z, Bao-Lan H., Appl Microbiol Biotechnol 98(11), 2014
PMID: 24515728
Chlorite dismutases - a heme enzyme family for use in bioremediation and generation of molecular oxygen.
Hofbauer S, Schaffner I, Furtmüller PG, Obinger C., Biotechnol J 9(4), 2014
PMID: 24519858
Hofbauer S, Schaffner I, Furtmüller PG, Obinger C., Biotechnol J 9(4), 2014
PMID: 24519858
Genomic and transcriptomic analyses of the facultative methanotroph Methylocystis sp. strain SB2 grown on methane or ethanol.
Vorobev A, Jagadevan S, Jain S, Anantharaman K, Dick GJ, Vuilleumier S, Semrau JD., Appl Environ Microbiol 80(10), 2014
PMID: 24610846
Vorobev A, Jagadevan S, Jain S, Anantharaman K, Dick GJ, Vuilleumier S, Semrau JD., Appl Environ Microbiol 80(10), 2014
PMID: 24610846
Evidence for nitrite-dependent anaerobic methane oxidation as a previously overlooked microbial methane sink in wetlands.
Hu BL, Shen LD, Lian X, Zhu Q, Liu S, Huang Q, He ZF, Geng S, Cheng DQ, Lou LP, Xu XY, Zheng P, He YF., Proc Natl Acad Sci U S A 111(12), 2014
PMID: 24616523
Hu BL, Shen LD, Lian X, Zhu Q, Liu S, Huang Q, He ZF, Geng S, Cheng DQ, Lou LP, Xu XY, Zheng P, He YF., Proc Natl Acad Sci U S A 111(12), 2014
PMID: 24616523
Ecological perspectives on microbes involved in N-cycling.
Isobe K, Ohte N., Microbes Environ 29(1), 2014
PMID: 24621510
Isobe K, Ohte N., Microbes Environ 29(1), 2014
PMID: 24621510
Methyloparacoccus murrellii gen. nov., sp. nov., a methanotroph isolated from pond water.
Hoefman S, van der Ha D, Iguchi H, Yurimoto H, Sakai Y, Boon N, Vandamme P, Heylen K, De Vos P., Int J Syst Evol Microbiol 64(pt 6), 2014
PMID: 24676728
Hoefman S, van der Ha D, Iguchi H, Yurimoto H, Sakai Y, Boon N, Vandamme P, Heylen K, De Vos P., Int J Syst Evol Microbiol 64(pt 6), 2014
PMID: 24676728
Early diagenetic processes generate iron and manganese oxide layers in the sediments of Lake Baikal, Siberia.
Torres NT, Och LM, Hauser PC, Furrer G, Brandl H, Vologina E, Sturm M, Bürgmann H, Müller B., Environ Sci Process Impacts 16(4), 2014
PMID: 24619231
Torres NT, Och LM, Hauser PC, Furrer G, Brandl H, Vologina E, Sturm M, Bürgmann H, Müller B., Environ Sci Process Impacts 16(4), 2014
PMID: 24619231
The drive to life on wet and icy worlds.
Russell MJ, Barge LM, Bhartia R, Bocanegra D, Bracher PJ, Branscomb E, Kidd R, McGlynn S, Meier DH, Nitschke W, Shibuya T, Vance S, White L, Kanik I., Astrobiology 14(4), 2014
PMID: 24697642
Russell MJ, Barge LM, Bhartia R, Bocanegra D, Bracher PJ, Branscomb E, Kidd R, McGlynn S, Meier DH, Nitschke W, Shibuya T, Vance S, White L, Kanik I., Astrobiology 14(4), 2014
PMID: 24697642
Bioconversion of natural gas to liquid fuel: opportunities and challenges.
Fei Q, Guarnieri MT, Tao L, Laurens LM, Dowe N, Pienkos PT., Biotechnol Adv 32(3), 2014
PMID: 24726715
Fei Q, Guarnieri MT, Tao L, Laurens LM, Dowe N, Pienkos PT., Biotechnol Adv 32(3), 2014
PMID: 24726715
Distribution and diversity of Verrucomicrobia methanotrophs in geothermal and acidic environments.
Sharp CE, Smirnova AV, Graham JM, Stott MB, Khadka R, Moore TR, Grasby SE, Strack M, Dunfield PF., Environ Microbiol 16(6), 2014
PMID: 24650084
Sharp CE, Smirnova AV, Graham JM, Stott MB, Khadka R, Moore TR, Grasby SE, Strack M, Dunfield PF., Environ Microbiol 16(6), 2014
PMID: 24650084
Enrichment of denitrifying methanotrophic bacteria from municipal wastewater sludge in a membrane bioreactor at 20°C.
Kampman C, Temmink H, Hendrickx TL, Zeeman G, Buisman CJ., J Hazard Mater 274(), 2014
PMID: 24809733
Kampman C, Temmink H, Hendrickx TL, Zeeman G, Buisman CJ., J Hazard Mater 274(), 2014
PMID: 24809733
Occurrence and diversity of nitrite-dependent anaerobic methane oxidation bacteria in the sediments of the South China Sea revealed by amplification of both 16S rRNA and pmoA genes.
Chen J, Zhou ZC, Gu JD., Appl Microbiol Biotechnol 98(12), 2014
PMID: 24769903
Chen J, Zhou ZC, Gu JD., Appl Microbiol Biotechnol 98(12), 2014
PMID: 24769903
Metatranscriptome of an anaerobic benzene-degrading, nitrate-reducing enrichment culture reveals involvement of carboxylation in benzene ring activation.
Luo F, Gitiafroz R, Devine CE, Gong Y, Hug LA, Raskin L, Edwards EA., Appl Environ Microbiol 80(14), 2014
PMID: 24795366
Luo F, Gitiafroz R, Devine CE, Gong Y, Hug LA, Raskin L, Edwards EA., Appl Environ Microbiol 80(14), 2014
PMID: 24795366
Plant-associated bacteria degrade defense chemicals and reduce their adverse effects on an insect defoliator.
Mason CJ, Couture JJ, Raffa KF., Oecologia 175(3), 2014
PMID: 24798201
Mason CJ, Couture JJ, Raffa KF., Oecologia 175(3), 2014
PMID: 24798201
PQQ-dependent methanol dehydrogenases: rare-earth elements make a difference.
Keltjens JT, Pol A, Reimann J, Op den Camp HJ., Appl Microbiol Biotechnol 98(14), 2014
PMID: 24816778
Keltjens JT, Pol A, Reimann J, Op den Camp HJ., Appl Microbiol Biotechnol 98(14), 2014
PMID: 24816778
Comparison of sulfate-reducing and conventional Anammox upflow anaerobic sludge blanket reactors.
Rikmann E, Zekker I, Tomingas M, Vabamäe P, Kroon K, Saluste A, Tenno T, Menert A, Loorits L, Rubin SS, Tenno T., J Biosci Bioeng 118(4), 2014
PMID: 24863179
Rikmann E, Zekker I, Tomingas M, Vabamäe P, Kroon K, Saluste A, Tenno T, Menert A, Loorits L, Rubin SS, Tenno T., J Biosci Bioeng 118(4), 2014
PMID: 24863179
Methane oxidation linked to chlorite dismutation.
Miller LG, Baesman SM, Carlström CI, Coates JD, Oremland RS., Front Microbiol 5(), 2014
PMID: 24987389
Miller LG, Baesman SM, Carlström CI, Coates JD, Oremland RS., Front Microbiol 5(), 2014
PMID: 24987389
Structure of hydrocarbonoclastic nitrate-reducing bacterial communities in bioturbated coastal marine sediments.
Stauffert M, Cravo-Laureau C, Duran R., FEMS Microbiol Ecol 89(3), 2014
PMID: 24862403
Stauffert M, Cravo-Laureau C, Duran R., FEMS Microbiol Ecol 89(3), 2014
PMID: 24862403
The molecular evolution of the Qo motif.
Kao WC, Hunte C., Genome Biol Evol 6(7), 2014
PMID: 25115012
Kao WC, Hunte C., Genome Biol Evol 6(7), 2014
PMID: 25115012
Metatranscriptomic analysis of arctic peat soil microbiota.
Tveit AT, Urich T, Svenning MM., Appl Environ Microbiol 80(18), 2014
PMID: 25015892
Tveit AT, Urich T, Svenning MM., Appl Environ Microbiol 80(18), 2014
PMID: 25015892
Simultaneous enrichment of denitrifying methanotrophs and anammox bacteria.
Ding ZW, Ding J, Fu L, Zhang F, Zeng RJ., Appl Microbiol Biotechnol 98(24), 2014
PMID: 25056292
Ding ZW, Ding J, Fu L, Zhang F, Zeng RJ., Appl Microbiol Biotechnol 98(24), 2014
PMID: 25056292
Gammaproteobacterial methanotrophs dominate cold methane seeps in floodplains of West Siberian rivers.
Oshkin IY, Wegner CE, Lüke C, Glagolev MV, Filippov IV, Pimenov NV, Liesack W, Dedysh SN., Appl Environ Microbiol 80(19), 2014
PMID: 25063667
Oshkin IY, Wegner CE, Lüke C, Glagolev MV, Filippov IV, Pimenov NV, Liesack W, Dedysh SN., Appl Environ Microbiol 80(19), 2014
PMID: 25063667
Community structure of planktonic methane-oxidizing bacteria in a subtropical reservoir characterized by dominance of phylotype closely related to nitrite reducer.
Kojima H, Tokizawa R, Kogure K, Kobayashi Y, Itoh M, Shiah FK, Okuda N, Fukui M., Sci Rep 4(), 2014
PMID: 25098653
Kojima H, Tokizawa R, Kogure K, Kobayashi Y, Itoh M, Shiah FK, Okuda N, Fukui M., Sci Rep 4(), 2014
PMID: 25098653
Depth-related coupling relation between methane-oxidizing bacteria (MOBs) and sulfate-reducing bacteria (SRBs) in a marine sediment core from the Dongsha region, the South China Sea.
Xu XM, Fu SY, Zhu Q, Xiao X, Yuan JP, Peng J, Wu CF, Wang JH., Appl Microbiol Biotechnol 98(24), 2014
PMID: 25064353
Xu XM, Fu SY, Zhu Q, Xiao X, Yuan JP, Peng J, Wu CF, Wang JH., Appl Microbiol Biotechnol 98(24), 2014
PMID: 25064353
Biosphere frontiers of subsurface life in the sedimented hydrothermal system of Guaymas Basin.
Teske A, Callaghan AV, LaRowe DE., Front Microbiol 5(), 2014
PMID: 25132832
Teske A, Callaghan AV, LaRowe DE., Front Microbiol 5(), 2014
PMID: 25132832
Effect of process design and operating parameters on aerobic methane oxidation in municipal WWTPs.
Daelman MRJ, Van Eynde T, van Loosdrecht MCM, Volcke EIP., Water Res 66(), 2014
PMID: 25225767
Daelman MRJ, Van Eynde T, van Loosdrecht MCM, Volcke EIP., Water Res 66(), 2014
PMID: 25225767
Expanding the verrucomicrobial methanotrophic world: description of three novel species of Methylacidimicrobium gen. nov.
van Teeseling MC, Pol A, Harhangi HR, van der Zwart S, Jetten MS, Op den Camp HJ, van Niftrik L., Appl Environ Microbiol 80(21), 2014
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Ducluzeau AL, Schoepp-Cothenet B, van Lis R, Baymann F, Russell MJ, Nitschke W., J R Soc Interface 11(98), 2014
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Zhou L, Wang Y, Long XE, Guo J, Zhu G., FEMS Microbiol Lett 360(1), 2014
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Sivan O, Antler G, Turchyn AV, Marlow JJ, Orphan VJ., Proc Natl Acad Sci U S A 111(40), 2014
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Shen LD, Liu S, Huang Q, Lian X, He ZF, Geng S, Jin RC, He YF, Lou LP, Xu XY, Zheng P, Hu BL., Appl Environ Microbiol 80(24), 2014
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Ge X, Yang L, Sheets JP, Yu Z, Li Y., Biotechnol Adv 32(8), 2014
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Dalsgaard T, Stewart FJ, Thamdrup B, De Brabandere L, Revsbech NP, Ulloa O, Canfield DE, DeLong EF., MBio 5(6), 2014
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A new analysis of Mars "Special Regions": findings of the second MEPAG Special Regions Science Analysis Group (SR-SAG2).
Rummel JD, Beaty DW, Jones MA, Bakermans C, Barlow NG, Boston PJ, Chevrier VF, Clark BC, de Vera JP, Gough RV, Hallsworth JE, Head JW, Hipkin VJ, Kieft TL, McEwen AS, Mellon MT, Mikucki JA, Nicholson WL, Omelon CR, Peterson R, Roden EE, Sherwood Lollar B, Tanaka KL, Viola D, Wray JJ., Astrobiology 14(11), 2014
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Intergenomic comparisons highlight modularity of the denitrification pathway and underpin the importance of community structure for N2O emissions.
Graf DR, Jones CM, Hallin S., PLoS One 9(12), 2014
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Graf DR, Jones CM, Hallin S., PLoS One 9(12), 2014
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Anaerobic methane oxidation coupled to denitrification is the dominant methane sink in a deep lake.
Deutzmann JS, Stief P, Brandes J, Schink B., Proc Natl Acad Sci U S A 111(51), 2014
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Deutzmann JS, Stief P, Brandes J, Schink B., Proc Natl Acad Sci U S A 111(51), 2014
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Enrichment of denitrifying methane-oxidizing microorganisms using up-flow continuous reactors and batch cultures.
Hatamoto M, Kimura M, Sato T, Koizumi M, Takahashi M, Kawakami S, Araki N, Yamaguchi T., PLoS One 9(12), 2014
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Hatamoto M, Kimura M, Sato T, Koizumi M, Takahashi M, Kawakami S, Araki N, Yamaguchi T., PLoS One 9(12), 2014
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Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies.
Ho A, Kerckhof FM, Luke C, Reim A, Krause S, Boon N, Bodelier PL., Environ Microbiol Rep 5(3), 2013
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Ho A, Kerckhof FM, Luke C, Reim A, Krause S, Boon N, Bodelier PL., Environ Microbiol Rep 5(3), 2013
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Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms.
Tveit A, Schwacke R, Svenning MM, Urich T., ISME J 7(2), 2013
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Anaerobic oxidation of methane in hypersaline cold seep sediments.
Maignien L, Parkes RJ, Cragg B, Niemann H, Knittel K, Coulon S, Akhmetzhanov A, Boon N., FEMS Microbiol Ecol 83(1), 2013
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Environmental transcription of mmoX by methane-oxidizing Proteobacteria in a subarctic Palsa Peatland.
Liebner S, Svenning MM., Appl Environ Microbiol 79(2), 2013
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Selection of associated heterotrophs by methane-oxidizing bacteria at different copper concentrations.
van der Ha D, Vanwonterghem I, Hoefman S, De Vos P, Boon N., Antonie Van Leeuwenhoek 103(3), 2013
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van der Ha D, Vanwonterghem I, Hoefman S, De Vos P, Boon N., Antonie Van Leeuwenhoek 103(3), 2013
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Fine-scale degrader community profiling over an aerobic/anaerobic redox gradient in a toluene-contaminated aquifer.
Larentis M, Hoermann K, Lueders T., Environ Microbiol Rep 5(2), 2013
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Larentis M, Hoermann K, Lueders T., Environ Microbiol Rep 5(2), 2013
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A genomic approach to the cryptic secondary metabolome of the anaerobic world.
Letzel AC, Pidot SJ, Hertweck C., Nat Prod Rep 30(3), 2013
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Letzel AC, Pidot SJ, Hertweck C., Nat Prod Rep 30(3), 2013
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Analysis of the coexisting pathways for NO and N2O formation in Chernozem using the (15)N-tracer SimKIM-Advanced model.
Stange CF, Spott O, Russow R., Isotopes Environ Health Stud 49(4), 2013
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Stange CF, Spott O, Russow R., Isotopes Environ Health Stud 49(4), 2013
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Biotechnologies for greenhouse gases (CH₄, N₂O, and CO₂) abatement: state of the art and challenges.
López JC, Quijano G, Souza TS, Estrada JM, Lebrero R, Muñoz R., Appl Microbiol Biotechnol 97(6), 2013
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López JC, Quijano G, Souza TS, Estrada JM, Lebrero R, Muñoz R., Appl Microbiol Biotechnol 97(6), 2013
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Revisiting methanotrophic communities in sewage treatment plants.
Ho A, Vlaeminck SE, Ettwig KF, Schneider B, Frenzel P, Boon N., Appl Environ Microbiol 79(8), 2013
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Ho A, Vlaeminck SE, Ettwig KF, Schneider B, Frenzel P, Boon N., Appl Environ Microbiol 79(8), 2013
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The methanol dehydrogenase gene, mxaF, as a functional and phylogenetic marker for proteobacterial methanotrophs in natural environments.
Lau E, Fisher MC, Steudler PA, Cavanaugh CM., PLoS One 8(2), 2013
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Lau E, Fisher MC, Steudler PA, Cavanaugh CM., PLoS One 8(2), 2013
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On the antiquity of metalloenzymes and their substrates in bioenergetics.
Nitschke W, McGlynn SE, Milner-White EJ, Russell MJ., Biochim Biophys Acta 1827(8-9), 2013
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Multiple Rieske/cytb complexes in a single organism.
ten Brink F, Schoepp-Cothenet B, van Lis R, Nitschke W, Baymann F., Biochim Biophys Acta 1827(11-12), 2013
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ten Brink F, Schoepp-Cothenet B, van Lis R, Nitschke W, Baymann F., Biochim Biophys Acta 1827(11-12), 2013
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Structural insights into diversity and n-alkane biodegradation mechanisms of alkane hydroxylases.
Ji Y, Mao G, Wang Y, Bartlam M., Front Microbiol 4(), 2013
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Ji Y, Mao G, Wang Y, Bartlam M., Front Microbiol 4(), 2013
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Microbial syntrophy: interaction for the common good.
Morris BE, Henneberger R, Huber H, Moissl-Eichinger C., FEMS Microbiol Rev 37(3), 2013
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Morris BE, Henneberger R, Huber H, Moissl-Eichinger C., FEMS Microbiol Rev 37(3), 2013
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Enzymes involved in the anaerobic oxidation of n-alkanes: from methane to long-chain paraffins.
Callaghan AV., Front Microbiol 4(), 2013
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Callaghan AV., Front Microbiol 4(), 2013
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Methanobactin and MmoD work in concert to act as the 'copper-switch' in methanotrophs.
Semrau JD, Jagadevan S, DiSpirito AA, Khalifa A, Scanlan J, Bergman BH, Freemeier BC, Baral BS, Bandow NL, Vorobev A, Haft DH, Vuilleumier S, Murrell JC., Environ Microbiol 15(11), 2013
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Semrau JD, Jagadevan S, DiSpirito AA, Khalifa A, Scanlan J, Bergman BH, Freemeier BC, Baral BS, Bandow NL, Vorobev A, Haft DH, Vuilleumier S, Murrell JC., Environ Microbiol 15(11), 2013
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Methane, microbes and models: fundamental understanding of the soil methane cycle for future predictions.
Nazaries L, Murrell JC, Millard P, Baggs L, Singh BK., Environ Microbiol 15(9), 2013
PMID: 23718889
Nazaries L, Murrell JC, Millard P, Baggs L, Singh BK., Environ Microbiol 15(9), 2013
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Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members.
Tan B, Dong X, Sensen CW, Foght J., Genome 56(10), 2013
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Tan B, Dong X, Sensen CW, Foght J., Genome 56(10), 2013
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Beating the acetyl coenzyme A-pathway to the origin of life.
Nitschke W, Russell MJ., Philos Trans R Soc Lond B Biol Sci 368(1622), 2013
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Nitschke W, Russell MJ., Philos Trans R Soc Lond B Biol Sci 368(1622), 2013
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Condensing the omics fog of microbial communities.
Muller EE, Glaab E, May P, Vlassis N, Wilmes P., Trends Microbiol 21(7), 2013
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Muller EE, Glaab E, May P, Vlassis N, Wilmes P., Trends Microbiol 21(7), 2013
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Vertical profiles of community and activity of methanotrophs in landfill cover soils of different age.
Kong JY, Su Y, Zhang QQ, Bai Y, Xia FF, Fang CR, He R., J Appl Microbiol 115(3), 2013
PMID: 23725010
Kong JY, Su Y, Zhang QQ, Bai Y, Xia FF, Fang CR, He R., J Appl Microbiol 115(3), 2013
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Microbial minorities modulate methane consumption through niche partitioning.
Bodelier PL, Meima-Franke M, Hordijk CA, Steenbergh AK, Hefting MM, Bodrossy L, von Bergen M, Seifert J., ISME J 7(11), 2013
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Bodelier PL, Meima-Franke M, Hordijk CA, Steenbergh AK, Hefting MM, Bodrossy L, von Bergen M, Seifert J., ISME J 7(11), 2013
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Manganese-oxidizing photosynthesis before the rise of cyanobacteria.
Johnson JE, Webb SM, Thomas K, Ono S, Kirschvink JL, Fischer WW., Proc Natl Acad Sci U S A 110(28), 2013
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Johnson JE, Webb SM, Thomas K, Ono S, Kirschvink JL, Fischer WW., Proc Natl Acad Sci U S A 110(28), 2013
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Genome analysis and physiological comparison of Alicycliphilus denitrificans strains BC and K601(T.).
Oosterkamp MJ, Veuskens T, Talarico Saia F, Weelink SA, Goodwin LA, Daligault HE, Bruce DC, Detter JC, Tapia R, Han CS, Land ML, Hauser LJ, Langenhoff AA, Gerritse J, van Berkel WJ, Pieper DH, Junca H, Smidt H, Schraa G, Davids M, Schaap PJ, Plugge CM, Stams AJ., PLoS One 8(6), 2013
PMID: 23825601
Oosterkamp MJ, Veuskens T, Talarico Saia F, Weelink SA, Goodwin LA, Daligault HE, Bruce DC, Detter JC, Tapia R, Han CS, Land ML, Hauser LJ, Langenhoff AA, Gerritse J, van Berkel WJ, Pieper DH, Junca H, Smidt H, Schraa G, Davids M, Schaap PJ, Plugge CM, Stams AJ., PLoS One 8(6), 2013
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Archaea in biogeochemical cycles.
Offre P, Spang A, Schleper C., Annu Rev Microbiol 67(), 2013
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Offre P, Spang A, Schleper C., Annu Rev Microbiol 67(), 2013
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The nitrogen cycle in anaerobic methanotrophic mats of the Black Sea is linked to sulfate reduction and biomass decomposition.
Siegert M, Taubert M, Seifert J, von Bergen-Tomm M, Basen M, Bastida F, Gehre M, Richnow HH, Krüger M., FEMS Microbiol Ecol 86(2), 2013
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Siegert M, Taubert M, Seifert J, von Bergen-Tomm M, Basen M, Bastida F, Gehre M, Richnow HH, Krüger M., FEMS Microbiol Ecol 86(2), 2013
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Evolution of cytochrome bc complexes: from membrane-anchored dehydrogenases of ancient bacteria to triggers of apoptosis in vertebrates.
Dibrova DV, Cherepanov DA, Galperin MY, Skulachev VP, Mulkidjanian AY., Biochim Biophys Acta 1827(11-12), 2013
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Dibrova DV, Cherepanov DA, Galperin MY, Skulachev VP, Mulkidjanian AY., Biochim Biophys Acta 1827(11-12), 2013
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Community composition of nirS-type denitrifier in a shallow eutrophic lake.
Yang JK, Cheng ZB, Li J, Miao LH., Microb Ecol 66(4), 2013
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Yang JK, Cheng ZB, Li J, Miao LH., Microb Ecol 66(4), 2013
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Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage.
Haroon MF, Hu S, Shi Y, Imelfort M, Keller J, Hugenholtz P, Yuan Z, Tyson GW., Nature 500(7464), 2013
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Haroon MF, Hu S, Shi Y, Imelfort M, Keller J, Hugenholtz P, Yuan Z, Tyson GW., Nature 500(7464), 2013
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Non-linear dynamics of carbon and hydrogen isotopic signatures based on a biological kinetic model of nitrite-dependent methane oxidation by "Candidatus Methylomirabilis oxyfera".
Vavilin VA, Rytov SV., Antonie Van Leeuwenhoek 104(6), 2013
PMID: 24057983
Vavilin VA, Rytov SV., Antonie Van Leeuwenhoek 104(6), 2013
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A newly designed degenerate PCR primer based on pmoA gene for detection of nitrite-dependent anaerobic methane-oxidizing bacteria from different ecological niches.
Han P, Gu JD., Appl Microbiol Biotechnol 97(23), 2013
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Han P, Gu JD., Appl Microbiol Biotechnol 97(23), 2013
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Microbial diversity in the era of omic technologies.
Nikolaki S, Tsiamis G., Biomed Res Int 2013(), 2013
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Nikolaki S, Tsiamis G., Biomed Res Int 2013(), 2013
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Hydrocarbon monooxygenase in Mycobacterium: recombinant expression of a member of the ammonia monooxygenase superfamily.
Coleman NV, Le NB, Ly MA, Ogawa HE, McCarl V, Wilson NL, Holmes AJ., ISME J 6(1), 2012
PMID: 21796219
Coleman NV, Le NB, Ly MA, Ogawa HE, McCarl V, Wilson NL, Holmes AJ., ISME J 6(1), 2012
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Ultrastructure of the denitrifying methanotroph "Candidatus Methylomirabilis oxyfera," a novel polygon-shaped bacterium.
Wu ML, van Teeseling MC, Willems MJ, van Donselaar EG, Klingl A, Rachel R, Geerts WJ, Jetten MS, Strous M, van Niftrik L., J Bacteriol 194(2), 2012
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Wu ML, van Teeseling MC, Willems MJ, van Donselaar EG, Klingl A, Rachel R, Geerts WJ, Jetten MS, Strous M, van Niftrik L., J Bacteriol 194(2), 2012
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The activity level of a microbial community function can be predicted from its metatranscriptome.
Helbling DE, Ackermann M, Fenner K, Kohler HP, Johnson DR., ISME J 6(4), 2012
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Helbling DE, Ackermann M, Fenner K, Kohler HP, Johnson DR., ISME J 6(4), 2012
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Hydrazine synthase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria.
Harhangi HR, Le Roy M, van Alen T, Hu BL, Groen J, Kartal B, Tringe SG, Quan ZX, Jetten MS, Op den Camp HJ., Appl Environ Microbiol 78(3), 2012
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Harhangi HR, Le Roy M, van Alen T, Hu BL, Groen J, Kartal B, Tringe SG, Quan ZX, Jetten MS, Op den Camp HJ., Appl Environ Microbiol 78(3), 2012
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Microbial methane cycling in a terrestrial mud volcano in eastern Taiwan.
Chang YH, Cheng TW, Lai WJ, Tsai WY, Sun CH, Lin LH, Wang PL., Environ Microbiol 14(4), 2012
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Chang YH, Cheng TW, Lai WJ, Tsai WY, Sun CH, Lin LH, Wang PL., Environ Microbiol 14(4), 2012
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Protein domain structure uncovers the origin of aerobic metabolism and the rise of planetary oxygen.
Kim KM, Qin T, Jiang YY, Chen LL, Xiong M, Caetano-Anollés D, Zhang HY, Caetano-Anollés G., Structure 20(1), 2012
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Kim KM, Qin T, Jiang YY, Chen LL, Xiong M, Caetano-Anollés D, Zhang HY, Caetano-Anollés G., Structure 20(1), 2012
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Effect of oxygen on the anaerobic methanotroph 'Candidatus Methylomirabilis oxyfera': kinetic and transcriptional analysis.
Luesken FA, Wu ML, Op den Camp HJ, Keltjens JT, Stunnenberg H, Francoijs KJ, Strous M, Jetten MS., Environ Microbiol 14(4), 2012
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Luesken FA, Wu ML, Op den Camp HJ, Keltjens JT, Stunnenberg H, Francoijs KJ, Strous M, Jetten MS., Environ Microbiol 14(4), 2012
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Characterization of the amicetin biosynthesis gene cluster from Streptomyces vinaceusdrappus NRRL 2363 implicates two alternative strategies for amide bond formation.
Zhang G, Zhang H, Li S, Xiao J, Zhang G, Zhu Y, Niu S, Ju J, Zhang C., Appl Environ Microbiol 78(7), 2012
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Crystal structure of quinol-dependent nitric oxide reductase from Geobacillus stearothermophilus.
Matsumoto Y, Tosha T, Pisliakov AV, Hino T, Sugimoto H, Nagano S, Sugita Y, Shiro Y., Nat Struct Mol Biol 19(2), 2012
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Trace metal requirements for microbial enzymes involved in the production and consumption of methane and nitrous oxide.
Glass JB, Orphan VJ., Front Microbiol 3(), 2012
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Glass JB, Orphan VJ., Front Microbiol 3(), 2012
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Microbial CH(4) and N(2)O Consumption in Acidic Wetlands.
Kolb S, Horn MA., Front Microbiol 3(), 2012
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Kolb S, Horn MA., Front Microbiol 3(), 2012
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The anti-inflammatory effects of methane.
Boros M, Ghyczy M, Érces D, Varga G, Tőkés T, Kupai K, Torday C, Kaszaki J., Crit Care Med 40(4), 2012
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Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers.
Kleinsteuber S, Schleinitz KM, Vogt C., Appl Microbiol Biotechnol 94(4), 2012
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Kleinsteuber S, Schleinitz KM, Vogt C., Appl Microbiol Biotechnol 94(4), 2012
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Methanotrophic communities in Australian woodland soils of varying salinity.
Bissett A, Abell GC, Bodrossy L, Richardson AE, Thrall PH., FEMS Microbiol Ecol 80(3), 2012
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Bissett A, Abell GC, Bodrossy L, Richardson AE, Thrall PH., FEMS Microbiol Ecol 80(3), 2012
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Differential expression of particulate methane monooxygenase genes in the verrucomicrobial methanotroph 'Methylacidiphilum kamchatkense' Kam1.
Erikstad HA, Jensen S, Keen TJ, Birkeland NK., Extremophiles 16(3), 2012
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Methane emission during municipal wastewater treatment.
Daelman MR, van Voorthuizen EM, van Dongen UG, Volcke EI, van Loosdrecht MC., Water Res 46(11), 2012
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Potential benefits of the application of yeast starters in table olive processing.
Arroyo-López FN, Romero-Gil V, Bautista-Gallego J, Rodríguez-Gómez F, Jiménez-Díaz R, García-García P, Querol A, Garrido-Fernández A., Front Microbiol 5(), 2012
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Arroyo-López FN, Romero-Gil V, Bautista-Gallego J, Rodríguez-Gómez F, Jiménez-Díaz R, García-García P, Querol A, Garrido-Fernández A., Front Microbiol 5(), 2012
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Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts.
Fan L, Reynolds D, Liu M, Stark M, Kjelleberg S, Webster NS, Thomas T., Proc Natl Acad Sci U S A 109(27), 2012
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One millimetre makes the difference: high-resolution analysis of methane-oxidizing bacteria and their specific activity at the oxic-anoxic interface in a flooded paddy soil.
Reim A, Lüke C, Krause S, Pratscher J, Frenzel P., ISME J 6(11), 2012
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Reim A, Lüke C, Krause S, Pratscher J, Frenzel P., ISME J 6(11), 2012
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Bacterial responses to a simulated colon tumor microenvironment.
Boleij A, Dutilh BE, Kortman GA, Roelofs R, Laarakkers CM, Engelke UF, Tjalsma H., Mol Cell Proteomics 11(10), 2012
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Boleij A, Dutilh BE, Kortman GA, Roelofs R, Laarakkers CM, Engelke UF, Tjalsma H., Mol Cell Proteomics 11(10), 2012
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Dynamics of CH4 oxidation in landfill biocover soil: effect of O2/CH4 ratio on CH4 metabolism.
Chi ZF, Lu WJ, Li H, Wang HT., Environ Pollut 170(), 2012
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Chi ZF, Lu WJ, Li H, Wang HT., Environ Pollut 170(), 2012
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Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi.
Sorokin DY, Lücker S, Vejmelkova D, Kostrikina NA, Kleerebezem R, Rijpstra WI, Damsté JS, Le Paslier D, Muyzer G, Wagner M, van Loosdrecht MC, Daims H., ISME J 6(12), 2012
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Sorokin DY, Lücker S, Vejmelkova D, Kostrikina NA, Kleerebezem R, Rijpstra WI, Damsté JS, Le Paslier D, Muyzer G, Wagner M, van Loosdrecht MC, Daims H., ISME J 6(12), 2012
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Biosynthesis and metabolic pathways of pivalic acid.
Rezanka T, Kolouchová I, Cejková A, Sigler K., Appl Microbiol Biotechnol 95(6), 2012
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Rezanka T, Kolouchová I, Cejková A, Sigler K., Appl Microbiol Biotechnol 95(6), 2012
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Discovery, taxonomic distribution, and phenotypic characterization of a gene required for 3-methylhopanoid production.
Welander PV, Summons RE., Proc Natl Acad Sci U S A 109(32), 2012
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Microbiology, ecology, and application of the nitrite-dependent anaerobic methane oxidation process.
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Slesak I, Slesak H, Kruk J., Astrobiology 12(8), 2012
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Ettwig KF, Speth DR, Reimann J, Wu ML, Jetten MS, Keltjens JT., Front Microbiol 3(), 2012
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In quest of the nitrogen oxidizing prokaryotes of the early Earth.
Vlaeminck SE, Hay AG, Maignien L, Verstraete W., Environ Microbiol 13(2), 2011
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Current knowledge of microbial community structures in landfills and its cover soils.
Semrau JD., Appl Microbiol Biotechnol 89(4), 2011
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Hu S, Zeng RJ, Keller J, Lant PA, Yuan Z., Environ Microbiol Rep 3(3), 2011
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Siljanen HM, Saari A, Krause S, Lensu A, Abell GC, Bodrossy L, Bodelier PL, Martikainen PJ., FEMS Microbiol Ecol 75(3), 2011
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Enzymology and ecology of the nitrogen cycle.
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Microorganisms and their roles in fundamental biogeochemical cycles.
Madsen EL., Curr Opin Biotechnol 22(3), 2011
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Thomazo C, Ader M, Philippot P., Geobiology 9(2), 2011
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Meckenstock RU, Mouttaki H., Curr Opin Biotechnol 22(3), 2011
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van de Leemput IA, Veraart AJ, Dakos V, de Klein JJ, Strous M, Scheffer M., Environ Microbiol 13(6), 2011
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Unexpected diversity of chlorite dismutases: a catalytically efficient dimeric enzyme from Nitrobacter winogradskyi.
Mlynek G, Sjöblom B, Kostan J, Füreder S, Maixner F, Gysel K, Furtmüller PG, Obinger C, Wagner M, Daims H, Djinović-Carugo K., J Bacteriol 193(10), 2011
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