Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network

Schröder J, Tauch A (2010)
FEMS Microbiology Reviews 34(5): 685-737.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Schröder, JasminUniBi; Tauch, AndreasUniBi
Einrichtung
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Arbeitsgruppe A. Tauch
Abstract / Bemerkung
The genus Corynebacterium belongs to the taxonomic class Actinobacteria representing the high G+C branch of gram-positive bacteria. Among the most prominent members of this genus is Corynebacterium glutamicum, which is used by the biotechnological industry for the fermentative production of l-amino acids. Because of its industrial importance, C. glutamicum is one of the best-studied gram-positive bacteria and an emerging model for the suborder Corynebacterineae. Over the past years, the transcriptional regulation of gene expression was intensively studied in C. glutamicum to gain insights into the regulatory gene composition and the architecture of the transcriptional regulatory network. Therefore, we have achieved considerable improvements in understanding the regulatory roles of the various transcription regulators and the topology of the gene-regulatory network. This review summarizes the current knowledge of the regulatory gene repertoire and the reconstruction of the transcriptional regulatory network. We describe the functional classification of the detected transcription regulators and their interactions in the gene-regulatory network. Moreover, we provide an overview of the molecular features of transcription regulators and their regulons to integrate these data into the gene-regulatory network and to unravel the flow of information from the environment toward the gene level.
Stichworte
transcriptional regulatory network; transcriptional regulation; regulator; Corynebacterium glutamicum; transcription; regulatory repertoire
Erscheinungsjahr
2010
Zeitschriftentitel
FEMS Microbiology Reviews
Band
34
Ausgabe
5
Seite(n)
685-737
ISSN
0168-6445
eISSN
1574-6976
Page URI
https://pub.uni-bielefeld.de/record/1794411

Zitieren

Schröder J, Tauch A. Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews. 2010;34(5):685-737.
Schröder, J., & Tauch, A. (2010). Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews, 34(5), 685-737. https://doi.org/10.1111/j.1574-6976.2010.00228.x
Schröder, Jasmin, and Tauch, Andreas. 2010. “Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network”. FEMS Microbiology Reviews 34 (5): 685-737.
Schröder, J., and Tauch, A. (2010). Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews 34, 685-737.
Schröder, J., & Tauch, A., 2010. Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews, 34(5), p 685-737.
J. Schröder and A. Tauch, “Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network”, FEMS Microbiology Reviews, vol. 34, 2010, pp. 685-737.
Schröder, J., Tauch, A.: Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network. FEMS Microbiology Reviews. 34, 685-737 (2010).
Schröder, Jasmin, and Tauch, Andreas. “Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network”. FEMS Microbiology Reviews 34.5 (2010): 685-737.

48 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Engineering of Corynebacterium glutamicum as a prototrophic pyruvate-producing strain: Characterization of a ramA-deficient mutant and its application for metabolic engineering.
Kataoka N, Vangnai AS, Pongtharangkul T, Yakushi T, Wada M, Yokota A, Matsushita K., Biosci Biotechnol Biochem 83(2), 2019
PMID: 30274551
Identifying the Growth Modulon of Corynebacterium glutamicum.
Haas T, Graf M, Nieß A, Busche T, Kalinowski J, Blombach B, Takors R., Front Microbiol 10(), 2019
PMID: 31134020
Overlap of Promoter Recognition Specificity of Stress Response Sigma Factors SigD and SigH in Corynebacterium glutamicum ATCC 13032.
Dostálová H, Busche T, Holátko J, Rucká L, Štěpánek V, Barvík I, Nešvera J, Kalinowski J, Pátek M., Front Microbiol 9(), 2018
PMID: 30687273
Ribosomal binding site sequences and promoters for expressing glutamate decarboxylase and producing γ-aminobutyrate in Corynebacterium glutamicum.
Shi F, Luan M, Li Y., AMB Express 8(1), 2018
PMID: 29671147
Deciphering the Adaptation of Corynebacterium glutamicum in Transition from Aerobiosis via Microaerobiosis to Anaerobiosis.
Lange J, Münch E, Müller J, Busche T, Kalinowski J, Takors R, Blombach B., Genes (Basel) 9(6), 2018
PMID: 29899275
Functional architecture and global properties of the Corynebacterium glutamicum regulatory network: Novel insights from a dataset with a high genomic coverage.
Freyre-González JA, Tauch A., J Biotechnol 257(), 2017
PMID: 27829123
Identification of the cAMP phosphodiesterase CpdA as novel key player in cAMP-dependent regulation in Corynebacterium glutamicum.
Schulte J, Baumgart M, Bott M., Mol Microbiol 103(3), 2017
PMID: 27862445
Production of amino acids - Genetic and metabolic engineering approaches.
Lee JH, Wendisch VF., Bioresour Technol 245(pt b), 2017
PMID: 28552565
Assignment of sigma factors of RNA polymerase to promoters in Corynebacterium glutamicum.
Dostálová H, Holátko J, Busche T, Rucká L, Rapoport A, Halada P, Nešvera J, Kalinowski J, Pátek M., AMB Express 7(1), 2017
PMID: 28651382
Regulons of global transcription factors in Corynebacterium glutamicum.
Toyoda K, Inui M., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26496920
High-titer biosynthesis of hyaluronic acid by recombinant Corynebacterium glutamicum.
Cheng F, Gong Q, Yu H, Stephanopoulos G., Biotechnol J 11(4), 2016
PMID: 26709615
Abasy Atlas: a comprehensive inventory of systems, global network properties and systems-level elements across bacteria.
Ibarra-Arellano MA, Campos-González AI, Treviño-Quintanilla LG, Tauch A, Freyre-González JA., Database (Oxford) 2016(), 2016
PMID: 27242034
Use of In Vitro Transcription System for Analysis of Corynebacterium glutamicum Promoters Recognized by Two Sigma Factors.
Šilar R, Holátko J, Rucká L, Rapoport A, Dostálová H, Kadeřábková P, Nešvera J, Pátek M., Curr Microbiol 73(3), 2016
PMID: 27270733
The small 6C RNA of Corynebacterium glutamicum is involved in the SOS response.
Pahlke J, Dostálová H, Holátko J, Degner U, Bott M, Pátek M, Polen T., RNA Biol 13(9), 2016
PMID: 27362471
Genetic identification of arsenate reductase and arsenite oxidase in redox transformations carried out by arsenic metabolising prokaryotes - A comprehensive review.
Kumari N, Jagadevan S., Chemosphere 163(), 2016
PMID: 27565307
Global Transcriptomic Analysis of the Response of Corynebacterium glutamicum to Vanillin.
Chen C, Pan J, Yang X, Guo C, Ding W, Si M, Zhang Y, Shen X, Wang Y., PLoS One 11(10), 2016
PMID: 27760214
Interplay between copper and zinc homeostasis through the transcriptional regulator Zur in Enterococcus faecalis.
Latorre M, Low M, Gárate E, Reyes-Jara A, Murray BE, Cambiazo V, González M., Metallomics 7(7), 2015
PMID: 25906431
Regulation of the Expression of De Novo Pyrimidine Biosynthesis Genes in Corynebacterium glutamicum.
Tanaka Y, Teramoto H, Inui M., J Bacteriol 197(20), 2015
PMID: 26260458
AraR, an l-Arabinose-Responsive Transcriptional Regulator in Corynebacterium glutamicum ATCC 31831, Exerts Different Degrees of Repression Depending on the Location of Its Binding Sites within the Three Target Promoter Regions.
Kuge T, Teramoto H, Inui M., J Bacteriol 197(24), 2015
PMID: 26416832
Non-Invasive Microbial Metabolic Activity Sensing at Single Cell Level by Perfusion of Calcein Acetoxymethyl Ester.
Krämer CE, Singh A, Helfrich S, Grünberger A, Wiechert W, Nöh K, Kohlheyer D., PLoS One 10(10), 2015
PMID: 26513257
Enterococcus faecalis reconfigures its transcriptional regulatory network activation at different copper levels.
Latorre M, Galloway-Peña J, Roh JH, Budinich M, Reyes-Jara A, Murray BE, Maass A, González M., Metallomics 6(3), 2014
PMID: 24382465
Recent progress in development of synthetic biology platforms and metabolic engineering of Corynebacterium glutamicum.
Woo HM, Park JB., J Biotechnol 180(), 2014
PMID: 24632177
Role of Corynebacterium glutamicum sprA encoding a serine protease in glxR-mediated global gene regulation.
Hong EJ, Park JS, Kim Y, Lee HS., PLoS One 9(4), 2014
PMID: 24691519
Involvement of the global regulator GlxR in 3-hydroxybenzoate and gentisate utilization by Corynebacterium glutamicum.
Chao H, Zhou NY., Appl Environ Microbiol 80(14), 2014
PMID: 24795375
Corynebacterium glutamicum sdhA encoding succinate dehydrogenase subunit A plays a role in cysR-mediated sulfur metabolism.
Lee DS, Park JS, Kim Y, Lee HS., Appl Microbiol Biotechnol 98(15), 2014
PMID: 24866946
Hyaluronic acid production with Corynebacterium glutamicum: effect of media composition on yield and molecular weight.
Hoffmann J, Altenbuchner J., J Appl Microbiol 117(3), 2014
PMID: 24863652
Genome-wide analysis of the role of global transcriptional regulator GntR1 in Corynebacterium glutamicum.
Tanaka Y, Takemoto N, Ito T, Teramoto H, Yukawa H, Inui M., J Bacteriol 196(18), 2014
PMID: 24982307
High-resolution detection of DNA binding sites of the global transcriptional regulator GlxR in Corynebacterium glutamicum.
Jungwirth B, Sala C, Kohl TA, Uplekar S, Baumbach J, Cole ST, Pühler A, Tauch A., Microbiology 159(pt 1), 2013
PMID: 23103979
Adaptive evolution of Corynebacterium glutamicum resistant to oxidative stress and its global gene expression profiling.
Lee JY, Seo J, Kim ES, Lee HS, Kim P., Biotechnol Lett 35(5), 2013
PMID: 23288296
Corynebacterium glutamicum promoters: a practical approach.
Pátek M, Holátko J, Busche T, Kalinowski J, Nešvera J., Microb Biotechnol 6(2), 2013
PMID: 23305350
Involvement of regulatory interactions among global regulators GlxR, SugR, and RamA in expression of ramA in Corynebacterium glutamicum.
Toyoda K, Teramoto H, Gunji W, Inui M, Yukawa H., J Bacteriol 195(8), 2013
PMID: 23396909
Genomic reconstruction of transcriptional regulatory networks in lactic acid bacteria.
Ravcheev DA, Best AA, Sernova NV, Kazanov MD, Novichkov PS, Rodionov DA., BMC Genomics 14(), 2013
PMID: 23398941
Maltose uptake by the novel ABC transport system MusEFGK2I causes increased expression of ptsG in Corynebacterium glutamicum.
Henrich A, Kuhlmann N, Eck AW, Krämer R, Seibold GM., J Bacteriol 195(11), 2013
PMID: 23543710
OxyR acts as a transcriptional repressor of hydrogen peroxide-inducible antioxidant genes in Corynebacterium glutamicum R.
Teramoto H, Inui M, Yukawa H., FEBS J 280(14), 2013
PMID: 23621709
Impact of different CO2/HCO3- levels on metabolism and regulation in Corynebacterium glutamicum.
Blombach B, Buchholz J, Busche T, Kalinowski J, Takors R., J Biotechnol 168(4), 2013
PMID: 24140290
CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands.
Pauling J, Röttger R, Tauch A, Azevedo V, Baumbach J., Nucleic Acids Res 40(database issue), 2012
PMID: 22080556
Global proteome survey of protocatechuate- and glucose-grown Corynebacterium glutamicum reveals multiple physiological differences.
Haussmann U, Poetsch A., J Proteomics 75(9), 2012
PMID: 22450470
Two-component signal transduction in Corynebacterium glutamicum and other corynebacteria: on the way towards stimuli and targets.
Bott M, Brocker M., Appl Microbiol Biotechnol 94(5), 2012
PMID: 22539022
Binding of the IclR-type regulator HutR in the histidine utilization (hut) gene cluster of the human pathogen Corynebacterium resistens DSM 45100.
Schröder J, Maus I, Ostermann AL, Kögler AC, Tauch A., FEMS Microbiol Lett 331(2), 2012
PMID: 22462578
Postgenomic approaches to using corynebacteria as biocatalysts.
Vertès AA, Inui M, Yukawa H., Annu Rev Microbiol 66(), 2012
PMID: 22803796
Construction of in vitro transcription system for Corynebacterium glutamicum and its use in the recognition of promoters of different classes.
Holátko J, Silar R, Rabatinová A, Sanderová H, Halada P, Nešvera J, Krásný L, Pátek M., Appl Microbiol Biotechnol 96(2), 2012
PMID: 22885668
Coordinated regulation of gnd, which encodes 6-phosphogluconate dehydrogenase, by the two transcriptional regulators GntR1 and RamA in Corynebacterium glutamicum.
Tanaka Y, Ehira S, Teramoto H, Inui M, Yukawa H., J Bacteriol 194(23), 2012
PMID: 23024346
Tools for genetic manipulations in Corynebacterium glutamicum and their applications.
Nešvera J, Pátek M., Appl Microbiol Biotechnol 90(5), 2011
PMID: 21519933
Genome-wide identification of in vivo binding sites of GlxR, a cyclic AMP receptor protein-type regulator in Corynebacterium glutamicum.
Toyoda K, Teramoto H, Inui M, Yukawa H., J Bacteriol 193(16), 2011
PMID: 21665967
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors.
Trost E, Al-Dilaimi A, Papavasiliou P, Schneider J, Viehoever P, Burkovski A, Soares SC, Almeida SS, Dorella FA, Miyoshi A, Azevedo V, Schneider MP, Silva A, Santos CS, Santos LS, Sabbadini P, Dias AA, Hirata R, Mattos-Guaraldi AL, Tauch A., BMC Genomics 12(), 2011
PMID: 21801446
Complete genome sequence of Corynebacterium variabile DSM 44702 isolated from the surface of smear-ripened cheeses and insights into cheese ripening and flavor generation.
Schröder J, Maus I, Trost E, Tauch A., BMC Genomics 12(), 2011
PMID: 22053731
Regulation of genes involved in sugar uptake, glycolysis and lactate production in Corynebacterium glutamicum.
Teramoto H, Inui M, Yukawa H., Future Microbiol 5(10), 2010
PMID: 21073308
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence.
Trost E, Ott L, Schneider J, Schröder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786

270 References

Daten bereitgestellt von Europe PubMed Central.

Systems biology: its practice and challenges.
Aderem A., Cell 121(4), 2005
PMID: 15907465
Molecular function of WhiB4/Rv3681c of Mycobacterium tuberculosis H37Rv: a [4Fe-4S] cluster co-ordinating protein disulphide reductase.
Alam MS, Garg SK, Agrawal P., Mol. Microbiol. 63(5), 2007
PMID: 17302817
Network motifs: theory and experimental approaches.
Alon U., Nat. Rev. Genet. 8(6), 2007
PMID: 17510665
Bacterial iron homeostasis.
Andrews SC, Robinson AK, Rodriguez-Quinones F., FEMS Microbiol. Rev. 27(2-3), 2003
PMID: 12829269
The ATP-cone: an evolutionarily mobile, ATP-binding regulatory domain
Aravind, J Mol Microb Biotech 2(), 2000
The many faces of the helix-turn-helix domain: transcription regulation and beyond.
Aravind L, Anantharaman V, Balaji S, Babu MM, Iyer LM., FEMS Microbiol. Rev. 29(2), 2005
PMID: 15808743
The alcohol dehydrogenase gene adhA in Corynebacterium glutamicum is subject to carbon catabolite repression.
Arndt A, Eikmanns BJ., J. Bacteriol. 189(20), 2007
PMID: 17693518
Dual transcriptional control of the acetaldehyde dehydrogenase gene ald of Corynebacterium glutamicum by RamA and RamB.
Auchter M, Arndt A, Eikmanns BJ., J. Biotechnol. 140(1-2), 2008
PMID: 19041911
Structure and evolution of transcriptional regulatory networks.
Babu MM, Luscombe NM, Aravind L, Gerstein M, Teichmann SA., Curr. Opin. Struct. Biol. 14(3), 2004
PMID: 15193307
Regulation by transcription factors in bacteria: beyond description.
Balleza E, Lopez-Bojorquez LN, Martinez-Antonio A, Resendis-Antonio O, Lozada-Chavez I, Balderas-Martinez YI, Encarnacion S, Collado-Vides J., FEMS Microbiol. Rev. 33(1), 2009
PMID: 19076632
Transcriptional analysis of the groES-groEL1, groEL2, and dnaK genes in Corynebacterium glutamicum: characterization of heat shock-induced promoters.
Barreiro C, Gonzalez-Lavado E, Patek M, Martin JF., J. Bacteriol. 186(14), 2004
PMID: 15231814
Heat shock proteome analysis of wild-type Corynebacterium glutamicum ATCC 13032 and a spontaneous mutant lacking GroEL1, a dispensable chaperone.
Barreiro C, Gonzalez-Lavado E, Brand S, Tauch A, Martin JF., J. Bacteriol. 187(3), 2005
PMID: 15659666
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum.
Barreiro C, Nakunst D, Huser AT, de Paz HD, Kalinowski J, Martin JF., Microbiology (Reading, Engl.) 155(Pt 2), 2009
PMID: 19202085
Transcriptional analysis of the F0F1 ATPase operon of Corynebacterium glutamicum ATCC 13032 reveals strong induction by alkaline pH.
Barriuso-Iglesias M, Barreiro C, Flechoso F, Martin JF., Microbiology (Reading, Engl.) 152(Pt 1), 2006
PMID: 16385111
CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.
Baumbach J., BMC Bioinformatics 8(), 2007
PMID: 17986320
Linking Cytoscape and the corynebacterial reference database CoryneRegNet.
Baumbach J, Apeltsin L., BMC Genomics 9(), 2008
PMID: 18426593
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
Reliable transfer of transcriptional gene regulatory networks between taxonomically related organisms.
Baumbach J, Rahmann S, Tauch A., BMC Syst Biol 3(), 2009
PMID: 19146695
Integrated analysis and reconstruction of microbial transcriptional gene regulatory networks using CoryneRegNet.
Baumbach J, Wittkop T, Kleindt CK, Tauch A., Nat Protoc 4(6), 2009
PMID: 19498379
Myo-inositol facilitators IolT1 and IolT2 enhance D-mannitol formation from D-fructose in Corynebacterium glutamicum.
Baumchen C, Krings E, Bringer S, Eggeling L, Sahm H., FEMS Microbiol. Lett. 290(2), 2008
PMID: 19054080
Glutamate synthase of Corynebacterium glutamicum is not essential for glutamate synthesis and is regulated by the nitrogen status.
Beckers G, Nolden L, Burkovski A., Microbiology (Reading, Engl.) 147(Pt 11), 2001
PMID: 11700347
Molecular identification of the urea uptake system and transcriptional analysis of urea transporter- and urease-encoding genes in Corynebacterium glutamicum.
Beckers G, Bendt AK, Kramer R, Burkovski A., J. Bacteriol. 186(22), 2004
PMID: 15516578
Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon.
Beckers G, Strosser J, Hildebrandt U, Kalinowski J, Farwick M, Kramer R, Burkovski A., Mol. Microbiol. 58(2), 2005
PMID: 16194241
Bacillus subtilis GabR, a protein with DNA-binding and aminotransferase domains, is a PLP-dependent transcriptional regulator.
Belitsky BR., J. Mol. Biol. 340(4), 2004
PMID: 15223311
Expression control and specificity of the basic amino acid exporter LysE of Corynebacterium glutamicum.
Bellmann A, Vrljic M, Patek M, Sahm H, Kramer R, Eggeling L., Microbiology (Reading, Engl.) 147(Pt 7), 2001
PMID: 11429454
Utilization of creatinine as an alternative nitrogen source in Corynebacterium glutamicum.
Bendt AK, Beckers G, Silberbach M, Wittmann A, Burkovski A., Arch. Microbiol. 181(6), 2004
PMID: 15148566
The ChrA-ChrS and HrrA-HrrS signal transduction systems are required for activation of the hmuO promoter and repression of the hemA promoter in Corynebacterium diphtheriae.
Bibb LA, Kunkle CA, Schmitt MP., Infect. Immun. 75(5), 2007
PMID: 17353293
Zn(II) metabolism in prokaryotes.
Blencowe DK, Morby AP., FEMS Microbiol. Rev. 27(2-3), 2003
PMID: 12829272
EDGAR: a software framework for the comparative analysis of prokaryotic genomes.
Blom J, Albaum SP, Doppmeier D, Puhler A, Vorholter FJ, Zakrzewski M, Goesmann A., BMC Bioinformatics 10(), 2009
PMID: 19457249
RamB is an activator of the pyruvate dehydrogenase complex subunit E1p gene in Corynebacterium glutamicum.
Blombach B, Cramer A, Eikmanns BJ, Schreiner M., J. Mol. Microbiol. Biotechnol. 16(3-4), 2007
PMID: 17890844
Molecular cloning and DNA sequence analysis of a diphtheria tox iron-dependent regulatory element (dtxR) from Corynebacterium diphtheriae.
Boyd J, Oza MN, Murphy JR., Proc. Natl. Acad. Sci. U.S.A. 87(15), 1990
PMID: 2116013
Transcriptional regulation of catabolic pathways for aromatic compounds in Corynebacterium glutamicum.
Brinkrolf K, Brune I, Tauch A., Genet. Mol. Res. 5(4), 2006
PMID: 17183485
The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum.
Brinkrolf K, Brune I, Tauch A., J. Biotechnol. 129(2), 2006
PMID: 17227685
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences.
Brinkrolf K, Ploger S, Solle S, Brune I, Nentwich SS, Huser AT, Kalinowski J, Puhler A, Tauch A., Microbiology (Reading, Engl.) 154(Pt 4), 2008
PMID: 18375800

AUTHOR UNKNOWN, 0
Evidence for activator and repressor functions of the response regulator MtrA from Corynebacterium glutamicum.
Brocker M, Bott M., FEMS Microbiol. Lett. 264(2), 2006
PMID: 17064374
Citrate utilization by Corynebacterium glutamicum is controlled by the CitAB two-component system through positive regulation of the citrate transport genes citH and tctCBA.
Brocker M, Schaffer S, Mack C, Bott M., J. Bacteriol. 191(12), 2009
PMID: 19376865
Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p)ppGpp synthase.
Brockmann-Gretza O, Kalinowski J., BMC Genomics 7(), 2006
PMID: 16961923
The MerR family of transcriptional regulators.
Brown NL, Stoyanov JV, Kidd SP, Hobman JL., FEMS Microbiol. Rev. 27(2-3), 2003
PMID: 12829265
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
Brune I, Brinkrolf K, Kalinowski J, Puhler A, Tauch A., BMC Genomics 6(), 2005
PMID: 15938759
The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum.
Brune I, Werner H, Huser AT, Kalinowski J, Puhler A, Tauch A., BMC Genomics 7(), 2006
PMID: 16469103
The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum.
Brune I, Jochmann N, Brinkrolf K, Huser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Puhler A, Tauch A., J. Bacteriol. 189(7), 2007
PMID: 17259312
A combination of metabolome and transcriptome analyses reveals new targets of the Corynebacterium glutamicum nitrogen regulator AmtR.
Buchinger S, Strosser J, Rehm N, Hanssler E, Hans S, Bathe B, Schomburg D, Kramer R, Burkovski A., J. Biotechnol. 140(1-2), 2008
PMID: 19041910
Ammonium assimilation and nitrogen control in Corynebacterium glutamicum and its relatives: an example for new regulatory mechanisms in actinomycetes.
Burkovski A., FEMS Microbiol. Rev. 27(5), 2003
PMID: 14638415
Nitrogen control in Corynebacterium glutamicum: proteins, mechanisms, signals.
Burkovski A., J. Microbiol. Biotechnol. 17(2), 2007
PMID: 18051748
The SmtB/ArsR family of metalloregulatory transcriptional repressors: Structural insights into prokaryotic metal resistance.
Busenlehner LS, Pennella MA, Giedroc DP., FEMS Microbiol. Rev. 27(2-3), 2003
PMID: 12829264
Transcriptional control of the succinate dehydrogenase operon sdhCAB of Corynebacterium glutamicum by the cAMP-dependent regulator GlxR and the LuxR-type regulator RamA.
Bussmann M, Emer D, Hasenbein S, Degraf S, Eikmanns BJ, Bott M., J. Biotechnol. 143(3), 2009
PMID: 19583988
The bacterial LexA transcriptional repressor.
Butala M, Zgur-Bertok D, Busby SJ., Cell. Mol. Life Sci. 66(1), 2009
PMID: 18726173
Rv2358 and FurB: two transcriptional regulators from Mycobacterium tuberculosis which respond to zinc.
Canneva F, Branzoni M, Riccardi G, Provvedi R, Milano A., J. Bacteriol. 187(16), 2005
PMID: 16077132
Genome-wide investigation of aromatic acid transporters in Corynebacterium glutamicum.
Chaudhry MT, Huang Y, Shen XH, Poetsch A, Jiang CY, Liu SJ., Microbiology (Reading, Engl.) 153(Pt 3), 2007
PMID: 17322206
Lsr2 of Mycobacterium tuberculosis is a DNA-bridging protein.
Chen JM, Ren H, Shaw JE, Wang YJ, Li M, Leung AS, Tran V, Berbenetz NM, Kocincova D, Yip CM, Reyrat JM, Liu J., Nucleic Acids Res. 36(7), 2008
PMID: 18187505
The whcA gene plays a negative role in oxidative stress response of Corynebacterium glutamicum.
Choi WW, Park SD, Lee SM, Kim HB, Kim Y, Lee HS., FEMS Microbiol. Lett. 290(1), 2008
PMID: 19016879
Identification of two prpDBC gene clusters in Corynebacterium glutamicum and their involvement in propionate degradation via the 2-methylcitrate cycle.
Claes WA, Puhler A, Kalinowski J., J. Bacteriol. 184(10), 2002
PMID: 11976302
Transcriptional regulation of multi-drug tolerance and antibiotic-induced responses by the histone-like protein Lsr2 in M. tuberculosis.
Colangeli R, Helb D, Vilcheze C, Hazbon MH, Lee CG, Safi H, Sayers B, Sardone I, Jones MB, Fleischmann RD, Peterson SN, Jacobs WR Jr, Alland D., PLoS Pathog. 3(6), 2007
PMID: 17590082
RamA, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to negative autoregulation.
Cramer A, Eikmanns BJ., J. Mol. Microbiol. Biotechnol. 12(1-2), 2007
PMID: 17183211
Identification of RamA, a novel LuxR-type transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
Cramer A, Gerstmeir R, Schaffer S, Bott M, Eikmanns BJ., J. Bacteriol. 188(7), 2006
PMID: 16547043
RamB, the transcriptional regulator of acetate metabolism in Corynebacterium glutamicum, is subject to regulation by RamA and RamB.
Cramer A, Auchter M, Frunzke J, Bott M, Eikmanns BJ., J. Bacteriol. 189(3), 2006
PMID: 17114251
Redox control in actinobacteria.
den Hengst CD, Buttner MJ., Biochim. Biophys. Acta 1780(11), 2008
PMID: 18252205
Regulation of ldh expression during biotin-limited growth of Corynebacterium glutamicum.
Dietrich C, Nato A, Bost B, Le Marechal P, Guyonvarch A., Microbiology (Reading, Engl.) 155(Pt 4), 2009
PMID: 19332837
Aggregation of topological motifs in the Escherichia coli transcriptional regulatory network.
Dobrin R, Beg QK, Barabasi AL, Oltvai ZN., BMC Bioinformatics 5(), 2004
PMID: 15018656
Growing repertoire of AraC/XylS activators.
Egan SM., J. Bacteriol. 184(20), 2002
PMID: 12270809
Group 2 sigma factor SigB of Corynebacterium glutamicum positively regulates glucose metabolism under conditions of oxygen deprivation.
Ehira S, Shirai T, Teramoto H, Inui M, Yukawa H., Appl. Environ. Microbiol. 74(16), 2008
PMID: 18567683
Regulation of quinone oxidoreductase by the redox-sensing transcriptional regulator QorR in Corynebacterium glutamicum.
Ehira S, Ogino H, Teramoto H, Inui M, Yukawa H., J. Biol. Chem. 284(25), 2009
PMID: 19403527
Regulation of Corynebacterium glutamicum heat shock response by the extracytoplasmic-function sigma factor SigH and transcriptional regulators HspR and HrcA.
Ehira S, Teramoto H, Inui M, Yukawa H., J. Bacteriol. 191(9), 2009
PMID: 19270092
Complex expression control of the Corynebacterium glutamicum aconitase gene: identification of RamA as a third transcriptional regulator besides AcnR and RipA.
Emer D, Krug A, Eikmanns BJ, Bott M., J. Biotechnol. 140(1-2), 2008
PMID: 19095019
clpC and clpP1P2 gene expression in Corynebacterium glutamicum is controlled by a regulatory network involving the transcriptional regulators ClgR and HspR as well as the ECF sigma factor sigmaH.
Engels S, Schweitzer JE, Ludwig C, Bott M, Schaffer S., Mol. Microbiol. 52(1), 2004
PMID: 15049827
The transcriptional activator ClgR controls transcription of genes involved in proteolysis and DNA repair in Corynebacterium glutamicum.
Engels S, Ludwig C, Schweitzer JE, Mack C, Bott M, Schaffer S., Mol. Microbiol. 57(2), 2005
PMID: 15978086
The DeoR-type regulator SugR represses expression of ptsG in Corynebacterium glutamicum.
Engels V, Wendisch VF., J. Bacteriol. 189(8), 2007
PMID: 17293426
The global repressor SugR controls expression of genes of glycolysis and of the L-lactate dehydrogenase LdhA in Corynebacterium glutamicum.
Engels V, Lindner SN, Wendisch VF., J. Bacteriol. 190(24), 2008
PMID: 18849435
Aeons of distress: an evolutionary perspective on the bacterial SOS response.
Erill I, Campoy S, Barbe J., FEMS Microbiol. Rev. 31(6), 2007
PMID: 17883408
The gene ncgl2918 encodes a novel maleylpyruvate isomerase that needs mycothiol as cofactor and links mycothiol biosynthesis and gentisate assimilation in Corynebacterium glutamicum.
Feng J, Che Y, Milse J, Yin YJ, Liu L, Ruckert C, Shen XH, Qi SW, Kalinowski J, Liu SJ., J. Biol. Chem. 281(16), 2006
PMID: 16481315
Finding the needles in the haystack: mapping constitutive proteolytic events in vivo.
Bogyo M., Biochem. J. 407(1), 2007
PMID: 17822382
From the characterization of the four serine/threonine protein kinases (PknA/B/G/L) of Corynebacterium glutamicum toward the role of PknA and PknB in cell division.
Fiuza M, Canova MJ, Zanella-Cleon I, Becchi M, Cozzone AJ, Mateos LM, Kremer L, Gil JA, Molle V., J. Biol. Chem. 283(26), 2008
PMID: 18442973
Functional architecture of Escherichia coli: new insights provided by a natural decomposition approach.
Freyre-Gonzalez JA, Alonso-Pavon JA, Trevino-Quintanilla LG, Collado-Vides J., Genome Biol. 9(10), 2008
PMID: 18954463
Co-ordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2.
Frunzke J, Engels V, Hasenbein S, Gatgens C, Bott M., Mol. Microbiol. 67(2), 2007
PMID: 18047570
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) in Corynebacterium glutamicum.
Gaigalat L, Schluter JP, Hartmann M, Mormann S, Tauch A, Puhler A, Kalinowski J., BMC Mol. Biol. 8(), 2007
PMID: 18005413
Arac/XylS family of transcriptional regulators.
Gallegos MT, Schleif R, Bairoch A, Hofmann K, Ramos JL., Microbiol. Mol. Biol. Rev. 61(4), 1997
PMID: 9409145
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups.
Gao B, Paramanathan R, Gupta RS., Antonie Van Leeuwenhoek 90(1), 2006
PMID: 16670965
The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: a novel homodimer assembling and the implication for effector-binding mode.
Gao YG, Yao M, Itou H, Zhou Y, Tanaka I., Protein Sci. 16(9), 2007
PMID: 17766384
Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization.
Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M., Nucleic Acids Res. 36(22), 2008
PMID: 18988622
Characterization of Mycobacterium tuberculosis WhiB1/Rv3219 as a protein disulfide reductase.
Garg SK, Suhail Alam M, Soni V, Radha Kishan KV, Agrawal P., Protein Expr. Purif. 52(2), 2006
PMID: 17157031
Regulation of L-lactate utilization by the FadR-type regulator LldR of Corynebacterium glutamicum.
Georgi T, Engels V, Wendisch VF., J. Bacteriol. 190(3), 2007
PMID: 18039772
RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
Gerstmeir R, Cramer A, Dangel P, Schaffer S, Eikmanns BJ., J. Bacteriol. 186(9), 2004
PMID: 15090522
Lsr2 of Mycobacterium represents a novel class of H-NS-like proteins.
Gordon BR, Imperial R, Wang L, Navarre WW, Liu J., J. Bacteriol. 190(21), 2008
PMID: 18776007
The ClpB ATPase of Streptomyces albus G belongs to the HspR heat shock regulon.
Grandvalet C, de Crecy-Lagard V, Mazodier P., Mol. Microbiol. 31(2), 1999
PMID: 10027969
The Streptomyces NrdR transcriptional regulator is a Zn ribbon/ATP cone protein that binds to the promoter regions of class Ia and class II ribonucleotide reductase operons.
Grinberg I, Shteinberg T, Gorovitz B, Aharonowitz Y, Cohen G, Borovok I., J. Bacteriol. 188(21), 2006
PMID: 16950922
Functional analysis of the Streptomyces coelicolor NrdR ATP-cone domain: role in nucleotide binding, oligomerization, and DNA interactions.
Grinberg I, Shteinberg T, Hassan AQ, Aharonowitz Y, Borovok I, Cohen G., J. Bacteriol. 191(4), 2008
PMID: 19047342
Multiple sigma subunits and the partitioning of bacterial transcription space.
Gruber TM, Gross CA., Annu. Rev. Microbiol. 57(), 2003
PMID: 14527287
Transcriptional and post-transcriptional control of cold-shock genes.
Gualerzi CO, Giuliodori AM, Pon CL., J. Mol. Biol. 331(3), 2003
PMID: 12899826
A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life.
Haas CE, Rodionov DA, Kropat J, Malasarn D, Merchant SS, de Crecy-Lagard V., BMC Genomics 10(), 2009
PMID: 19822009
Cloning and transcriptional characterization of two sigma factor genes, sigA and sigB, from Brevibacterium flavum.
Halgasova N, Bukovska G, Timko J, Kormanec J., Curr. Microbiol. 43(4), 2001
PMID: 11683358
The Brevibacterium flavum sigma factor SigB has a role in the environmental stress response.
Halgasova N, Bukovska G, Ugorcakova J, Timko J, Kormanec J., FEMS Microbiol. Lett. 216(1), 2002
PMID: 12423756
Expression of Corynebacterium glutamicum glycolytic genes varies with carbon source and growth phase.
Han SO, Inui M, Yukawa H., Microbiology (Reading, Engl.) 153(Pt 7), 2007
PMID: 17600063
Effect of carbon source availability and growth phase on expression of Corynebacterium glutamicum genes involved in the tricarboxylic acid cycle and glyoxylate bypass.
Han SO, Inui M, Yukawa H., Microbiology (Reading, Engl.) 154(Pt 10), 2008
PMID: 18832313
Transcription of Corynebacterium glutamicum genes involved in tricarboxylic acid cycle and glyoxylate cycle.
Han SO, Inui M, Yukawa H., J. Mol. Microbiol. Biotechnol. 15(4), 2008
PMID: 18285691
FarR, a putative regulator of amino acid metabolism in Corynebacterium glutamicum.
Hanssler E, Muller T, Jessberger N, Volzke A, Plassmeier J, Kalinowski J, Kramer R, Burkovski A., Appl. Microbiol. Biotechnol. 76(3), 2007
PMID: 17483938
A game with many players: control of gdh transcription in Corynebacterium glutamicum.
Hanssler E, Muller T, Palumbo K, Patek M, Brocker M, Kramer R, Burkovski A., J. Biotechnol. 142(2), 2009
PMID: 19394370
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032.
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Puhler A, Kalinowski J., Microbiology (Reading, Engl.) 152(Pt 4), 2006
PMID: 16549657
The glycosylated cell surface protein Rpf2, containing a resuscitation-promoting factor motif, is involved in intercellular communication of Corynebacterium glutamicum.
Hartmann M, Barsch A, Niehaus K, Puhler A, Tauch A, Kalinowski J., Arch. Microbiol. 182(4), 2004
PMID: 15480574
Crystallization and preliminary crystallographic analysis of the global nitrogen regulator AmtR from Corynebacterium glutamicum.
Hasselt K, Sevvana M, Burkovski A, Muller YA., Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 65(Pt 11), 2009
PMID: 19923732
Analysis of biotin biosynthesis pathway in coryneform bacteria: Brevibacterium flavum.
Hatakeyama K, Kobayashi M, Yukawa H., Meth. Enzymol. 279(), 1997
PMID: 9211286
Transcriptome analysis reveals global expression changes in an industrial L-lysine producer of Corynebacterium glutamicum.
Hayashi M, Ohnishi J, Mitsuhashi S, Yonetani Y, Hashimoto S, Ikeda M., Biosci. Biotechnol. Biochem. 70(2), 2006
PMID: 16495679
Reconstruction of microbial transcriptional regulatory networks.
Herrgard MJ, Covert MW, Palsson BO., Curr. Opin. Biotechnol. 15(1), 2004
PMID: 15102470
Biology and molecular epidemiology of diphtheria toxin and the tox gene.
Holmes RK., J. Infect. Dis. 181 Suppl 1(), 2000
PMID: 10657208
Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism.
Huang N, De Ingeniis J, Galeazzi L, Mancini C, Korostelev YD, Rakhmaninova AB, Gelfand MS, Rodionov DA, Raffaelli N, Zhang H., Structure 17(7), 2009
PMID: 19604474
Genetic characterization of the resorcinol catabolic pathway in Corynebacterium glutamicum.
Huang Y, Zhao KX, Shen XH, Chaudhry MT, Jiang CY, Liu SJ., Appl. Environ. Microbiol. 72(11), 2006
PMID: 16963551
The Corynebacterium glutamicum genome: features and impacts on biotechnological processes.
Ikeda M, Nakagawa S., Appl. Microbiol. Biotechnol. 62(2-3), 2003
PMID: 12743753
A genome-based approach to create a minimally mutated Corynebacterium glutamicum strain for efficient L-lysine production.
Ikeda M, Ohnishi J, Hayashi M, Mitsuhashi S., J. Ind. Microbiol. Biotechnol. 33(7), 2006
PMID: 16506038
Elucidation of genes relevant to the microaerobic growth of Corynebacterium glutamicum.
Ikeda M, Baba M, Tsukamoto N, Komatsu T, Mitsuhashi S, Takeno S., Biosci. Biotechnol. Biochem. 73(12), 2009
PMID: 19966452
The phosphate starvation stimulon of Corynebacterium glutamicum determined by DNA microarray analyses.
Ishige T, Krause M, Bott M, Wendisch VF, Sahm H., J. Bacteriol. 185(15), 2003
PMID: 12867461
Functional modulation of Escherichia coli RNA polymerase.
Ishihama A., Annu. Rev. Microbiol. 54(), 2000
PMID: 11018136
The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis.
Itou H, Okada U, Suzuki H, Yao M, Wachi M, Watanabe N, Tanaka I., J. Biol. Chem. 280(46), 2005
PMID: 16166084
Gene expression analysis of Corynebacterium glutamicum subjected to long-term lactic acid adaptation.
Jakob K, Satorhelyi P, Lange C, Wendisch VF, Silakowski B, Scherer S, Neuhaus K., J. Bacteriol. 189(15), 2007
PMID: 17526706
AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum.
Jakoby M, Nolden L, Meier-Wagner J, Kramer R, Burkovski A., Mol. Microbiol. 37(4), 2000
PMID: 10972815
Conservation of DNA curvature signals in regulatory regions of prokaryotic genes.
Jauregui R, Abreu-Goodger C, Moreno-Hagelsieb G, Collado-Vides J, Merino E., Nucleic Acids Res. 31(23), 2003
PMID: 14627810
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays.
Jochmann N, Kurze AK, Czaja LF, Brinkrolf K, Brune I, Huser AT, Hansmeier N, Puhler A, Borovok I, Tauch A., Microbiology (Reading, Engl.) 155(Pt 5), 2009
PMID: 19372162
Identification and characterization of a bacterial transport system for the uptake of pyruvate, propionate, and acetate in Corynebacterium glutamicum.
Jolkver E, Emer D, Ballan S, Kramer R, Eikmanns BJ, Marin K., J. Bacteriol. 191(3), 2008
PMID: 19028892
Triple transcriptional control of the resuscitation promoting factor 2 (rpf2) gene of Corynebacterium glutamicum by the regulators of acetate metabolism RamA and RamB and the cAMP-dependent regulator GlxR.
Jungwirth B, Emer D, Brune I, Hansmeier N, Puhler A, Eikmanns BJ, Tauch A., FEMS Microbiol. Lett. 281(2), 2008
PMID: 18355281
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
Export of L-isoleucine from Corynebacterium glutamicum: a two-gene-encoded member of a new translocator family.
Kennerknecht N, Sahm H, Yen MR, Patek M, Saier Jr MH Jr, Eggeling L., J. Bacteriol. 184(14), 2002
PMID: 12081967
rpoB gene sequencing for identification of Corynebacterium species.
Khamis A, Raoult D, La Scola B., J. Clin. Microbiol. 42(9), 2004
PMID: 15364970
Identification and characterization of glxR, a gene involved in regulation of glyoxylate bypass in Corynebacterium glutamicum.
Kim HJ, Kim TH, Kim Y, Lee HS., J. Bacteriol. 186(11), 2004
PMID: 15150232
Functional analysis of sigH expression in Corynebacterium glutamicum.
Kim TH, Kim HJ, Park JS, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 331(4), 2005
PMID: 15883048
The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress.
Kim TH, Park JS, Kim HJ, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 337(3), 2005
PMID: 16212936
Expression analysis of the csp-like genes from Corynebacterium glutamicum encoding homologs of the Escherichia coli major cold-shock protein cspA.
Kim WS, Park SD, Lee SM, Kim Y, Kim P, Lee HS., J. Microbiol. Biotechnol. 17(8), 2007
PMID: 18051605
Triggering mechanism of L-glutamate overproduction by DtsR1 in coryneform bacteria.
Kimura E., J. Biosci. Bioeng. 94(6), 2002
PMID: 16233348
Metabolic engineering of glutamate production.
Kimura E., Adv. Biochem. Eng. Biotechnol. 79(), 2003
PMID: 12523388
In silico genome-scale reconstruction and validation of the Corynebacterium glutamicum metabolic network.
Kjeldsen KR, Nielsen J., Biotechnol. Bioeng. 102(2), 2009
PMID: 18985611
Two-component systems of Corynebacterium glutamicum: deletion analysis and involvement of the PhoS-PhoR system in the phosphate starvation response.
Kocan M, Schaffer S, Ishige T, Sorger-Herrmann U, Wendisch VF, Bott M., J. Bacteriol. 188(2), 2006
PMID: 16385062
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate.
Koch DJ, Ruckert C, Albersmeier A, Huser AT, Tauch A, Puhler A, Kalinowski J., Mol. Microbiol. 58(2), 2005
PMID: 16194234
Role of the ssu and seu genes of Corynebacterium glutamicum ATCC 13032 in utilization of sulfonates and sulfonate esters as sulfur sources.
Koch DJ, Ruckert C, Rey DA, Mix A, Puhler A, Kalinowski J., Appl. Environ. Microbiol. 71(10), 2005
PMID: 16204527
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: Detection of the corynebacterial core regulon and integration into the transcriptional regulatory network model.
Kohl TA, Tauch A., J. Biotechnol. 143(4), 2009
PMID: 19665500
The GlxR regulon of the amino acid producer Corynebacterium glutamicum: in silico and in vitro detection of DNA binding sites of a global transcription regulator.
Kohl TA, Baumbach J, Jungwirth B, Puhler A, Tauch A., J. Biotechnol. 135(4), 2008
PMID: 18573287
Trends between gene content and genome size in prokaryotic species with larger genomes.
Konstantinidis KT, Tiedje JM., Proc. Natl. Acad. Sci. U.S.A. 101(9), 2004
PMID: 14973198
Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs.
Korner H, Sofia HJ, Zumft WG., FEMS Microbiol. Rev. 27(5), 2003
PMID: 14638413
Regulation of methionine/cysteine biosynthesis in Corynebacterium glutamicum and related organisms
Kovaleva, Mol Biol 41(), 2007
Characterization of myo-inositol utilization by Corynebacterium glutamicum: the stimulon, identification of transporters, and influence on L-lysine formation.
Krings E, Krumbach K, Bathe B, Kelle R, Wendisch VF, Sahm H, Eggeling L., J. Bacteriol. 188(23), 2006
PMID: 16997948
Identification of AcnR, a TetR-type repressor of the aconitase gene acn in Corynebacterium glutamicum.
Krug A, Wendisch VF, Bott M., J. Biol. Chem. 280(1), 2004
PMID: 15494411
The alternative sigma factor SigB of Corynebacterium glutamicum modulates global gene expression during transition from exponential growth to stationary phase.
Larisch C, Nakunst D, Huser AT, Tauch A, Kalinowski J., BMC Genomics 8(), 2007
PMID: 17204139
Functional specialization within the Fur family of metalloregulators.
Lee JW, Helmann JD., Biometals 20(3-4), 2007
PMID: 17216355
The effect of ArgR-DNA binding affinity on ornithine production in Corynebacterium glutamicum.
Lee SY, Kim YH, Min J., Curr. Microbiol. 59(4), 2009
PMID: 19688381
Conversion of phenol to glutamate and proline in Corynebacterium glutamicum is regulated by transcriptional regulator ArgR.
Lee SY, Kim YH, Min J., Appl. Microbiol. Biotechnol. 85(3), 2009
PMID: 19707750
Proline reduces the binding of transcriptional regulator ArgR to upstream of argB in Corynebacterium glutamicum.
Lee SY, Shin HS, Park JS, Kim YH, Min J., Appl. Microbiol. Biotechnol. 86(1), 2009
PMID: 19798496
Characterization and use of catabolite-repressed promoters from gluconate genes in Corynebacterium glutamicum.
Letek M, Valbuena N, Ramos A, Ordonez E, Gil JA, Mateos LM., J. Bacteriol. 188(2), 2006
PMID: 16385030
Biotechnological production of amino acids and derivatives: current status and prospects.
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
Bacterial regulatory networks are extremely flexible in evolution.
Lozada-Chavez I, Janga SC, Collado-Vides J., Nucleic Acids Res. 34(12), 2006
PMID: 16840530
Hierarchical structure and modules in the Escherichia coli transcriptional regulatory network revealed by a new top-down approach.
Ma HW, Buer J, Zeng AP., BMC Bioinformatics 5(), 2004
PMID: 15603590
An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs.
Ma HW, Kumar B, Ditges U, Gunzer F, Buer J, Zeng AP., Nucleic Acids Res. 32(22), 2004
PMID: 15604458
The arginine repressor of Escherichia coli.
Maas WK., Microbiol. Rev. 58(4), 1994
PMID: 7854250
Functional determinants of transcription factors in Escherichia coli: protein families and binding sites.
Madan Babu M, Teichmann SA., Trends Genet. 19(2), 2003
PMID: 12547514
Evolution of transcription factors and the gene regulatory network in Escherichia coli.
Madan Babu M, Teichmann SA., Nucleic Acids Res. 31(4), 2003
PMID: 12582243
Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins.
Maddocks SE, Oyston PC., Microbiology (Reading, Engl.) 154(Pt 12), 2008
PMID: 19047729
Regulatory dynamics of synthetic gene networks with positive feedback.
Maeda YT, Sano M., J. Mol. Biol. 359(4), 2006
PMID: 16701695
Conservation of the binding site for the arginine repressor in all bacterial lineages
Makarova, Genome Biol 2(), 2001
Structure and function of the feed-forward loop network motif.
Mangan S, Alon U., Proc. Natl. Acad. Sci. U.S.A. 100(21), 2003
PMID: 14530388
The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks.
Mangan S, Zaslaver A, Alon U., J. Mol. Biol. 334(2), 2003
PMID: 14607112
The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli.
Mangan S, Itzkovitz S, Zaslaver A, Alon U., J. Mol. Biol. 356(5), 2005
PMID: 16406067
Functional analysis of all aminotransferase proteins inferred from the genome sequence of Corynebacterium glutamicum.
Marienhagen J, Kennerknecht N, Sahm H, Eggeling L., J. Bacteriol. 187(22), 2005
PMID: 16267288
Identifying global regulators in transcriptional regulatory networks in bacteria.
Martinez-Antonio A, Collado-Vides J., Curr. Opin. Microbiol. 6(5), 2003
PMID: 14572541
Functional organisation of Escherichia coli transcriptional regulatory network.
Martinez-Antonio A, Janga SC, Thieffry D., J. Mol. Biol. 381(1), 2008
PMID: 18599074
Structural and functional map of a bacterial nucleoid.
Martinez-Antonio A, Medina-Rivera A, Collado-Vides J., Genome Biol. 10(12), 2009
PMID: 19995411
New insights into the regulatory networks of paralogous genes in bacteria.
Martinez-Nunez MA, Perez-Rueda E, Gutierrez-Rios RM, Merino E., Microbiology (Reading, Engl.) 156(Pt 1), 2009
PMID: 19850620
Corynebacterium glutamicum as a model bacterium for the bioremediation of arsenic.
Mateos LM, Ordonez E, Letek M, Gil JA., Int. Microbiol. 9(3), 2006
PMID: 17061211
Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum.
McHardy AC, Tauch A, Ruckert C, Puhler A, Kalinowski J., J. Biotechnol. 104(1-3), 2003
PMID: 12948641
Vanillate metabolism in Corynebacterium glutamicum.
Merkens H, Beckers G, Wirtz A, Burkovski A., Curr. Microbiol. 51(1), 2005
PMID: 15971090
The Mycobacterium tuberculosis Rv2358-furB operon is induced by zinc.
Milano A, Branzoni M, Canneva F, Profumo A, Riccardi G., Res. Microbiol. 155(3), 2004
PMID: 15059632
Network motifs: simple building blocks of complex networks.
Milo R, Shen-Orr S, Itzkovitz S, Kashtan N, Chklovskii D, Alon U., Science 298(5594), 2002
PMID: 12399590
Deletion of the genes encoding the MtrA-MtrB two-component system of Corynebacterium glutamicum has a strong influence on cell morphology, antibiotics susceptibility and expression of genes involved in osmoprotection.
Moker N, Brocker M, Schaffer S, Kramer R, Morbach S, Bott M., Mol. Microbiol. 54(2), 2004
PMID: 15469514
Osmosensing properties of the histidine protein kinase MtrB from Corynebacterium glutamicum.
Moker N, Reihlen P, Kramer R, Morbach S., J. Biol. Chem. 282(38), 2007
PMID: 17650500
Members of the IclR family of bacterial transcriptional regulators function as activators and/or repressors.
Molina-Henares AJ, Krell T, Eugenia Guazzaroni M, Segura A, Ramos JL., FEMS Microbiol. Rev. 30(2), 2006
PMID: 16472303
Analyses of enzyme II gene mutants for sugar transport and heterologous expression of fructokinase gene in Corynebacterium glutamicum ATCC 13032.
Moon MW, Kim HJ, Oh TK, Shin CS, Lee JS, Kim SJ, Lee JK., FEMS Microbiol. Lett. 244(2), 2005
PMID: 15766777
The phosphotransferase system of Corynebacterium glutamicum: features of sugar transport and carbon regulation.
Moon MW, Park SY, Choi SK, Lee JK., J. Mol. Microbiol. Biotechnol. 12(1-2), 2007
PMID: 17183210
Identification and analysis of DNA-binding transcription factors in Bacillus subtilis and other Firmicutes--a genomic approach.
Moreno-Campuzano S, Janga SC, Perez-Rueda E., BMC Genomics 7(), 2006
PMID: 16772031
Genome-wide transcription profiling of Corynebacterium glutamicum after heat shock and during growth on acetate and glucose.
Muffler A, Bettermann S, Haushalter M, Horlein A, Neveling U, Schramm M, Sorgenfrei O., J. Biotechnol. 98(2-3), 2002
PMID: 12141991
DNA binding by Corynebacterium glutamicum TetR-type transcription regulator AmtR.
Muhl D, Jessberger N, Hasselt K, Jardin C, Sticht H, Burkovski A., BMC Mol. Biol. 10(), 2009
PMID: 19627583
The extracytoplasmic function-type sigma factor SigM of Corynebacterium glutamicum ATCC 13032 is involved in transcription of disulfide stress-related genes.
Nakunst D, Larisch C, Huser AT, Tauch A, Puhler A, Kalinowski J., J. Bacteriol. 189(13), 2007
PMID: 17483229
Characterization of the LacI-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032.
Nentwich SS, Brinkrolf K, Gaigalat L, Huser AT, Rey DA, Mohrbach T, Marin K, Puhler A, Tauch A, Kalinowski J., Microbiology (Reading, Engl.) 155(Pt 1), 2009
PMID: 19118356
Anaerobic growth of Corynebacterium glutamicum using nitrate as a terminal electron acceptor.
Nishimura T, Vertes AA, Shinoda Y, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 75(4), 2007
PMID: 17347820
ArnR, a novel transcriptional regulator, represses expression of the narKGHJI operon in Corynebacterium glutamicum.
Nishimura T, Teramoto H, Vertes AA, Inui M, Yukawa H., J. Bacteriol. 190(9), 2008
PMID: 18296524
Glutamine synthetases of Corynebacterium glutamicum: transcriptional control and regulation of activity.
Nolden L, Farwick M, Kramer R, Burkovski A., FEMS Microbiol. Lett. 201(1), 2001
PMID: 11445173
Sensing nitrogen limitation in Corynebacterium glutamicum: the role of glnK and glnD.
Nolden L, Ngouoto-Nkili CE, Bendt AK, Kramer R, Burkovski A., Mol. Microbiol. 42(5), 2001
PMID: 11886559
Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?
Nystrom T., Mol. Microbiol. 54(4), 2004
PMID: 15522072
DivS, a novel SOS-inducible cell-division suppressor in Corynebacterium glutamicum.
Ogino H, Teramoto H, Inui M, Yukawa H., Mol. Microbiol. 67(3), 2007
PMID: 18086211
Multiple sigma factor genes in Brevibacterium lactofermentum: characterization of sigA and sigB.
Oguiza JA, Marcos AT, Malumbres M, Martin JF., J. Bacteriol. 178(2), 1996
PMID: 8550480
Transcriptional analysis of the sigA and sigB genes of Brevibacterium lactofermentum.
Oguiza JA, Marcos AT, Martin JF., FEMS Microbiol. Lett. 153(1), 1997
PMID: 9252580
Analysis of genes that encode DtxR-like transcriptional regulators in pathogenic and saprophytic corynebacterial species.
Oram DM, Avdalovic A, Holmes RK., Infect. Immun. 72(4), 2004
PMID: 15039307
Transcription of the contiguous sigB, dtxR, and galE genes in Corynebacterium diphtheriae: evidence for multiple transcripts and regulation by environmental factors.
Oram DM, Jacobson AD, Holmes RK., J. Bacteriol. 188(8), 2006
PMID: 16585757
Analysis of genes involved in arsenic resistance in Corynebacterium glutamicum ATCC 13032.
Ordonez E, Letek M, Valbuena N, Gil JA, Mateos LM., Appl. Environ. Microbiol. 71(10), 2005
PMID: 16204540
Evolution of metal(loid) binding sites in transcriptional regulators.
Ordonez E, Thiyagarajan S, Cook JD, Stemmler TL, Gil JA, Mateos LM, Rosen BP., J. Biol. Chem. 283(37), 2008
PMID: 18591244
Arsenate reductase, mycothiol, and mycoredoxin concert thiol/disulfide exchange.
Ordonez E, Van Belle K, Roos G, De Galan S, Letek M, Gil JA, Wyns L, Mateos LM, Messens J., J. Biol. Chem. 284(22), 2009
PMID: 19286650
Corynebacterium glutamicum sigmaE is involved in responses to cell surface stresses and its activity is controlled by the anti-sigma factor CseE.
Park SD, Youn JW, Kim YJ, Lee SM, Kim Y, Lee HS., Microbiology (Reading, Engl.) 154(Pt 3), 2008
PMID: 18310037
Regulation of the SigH stress response regulon by an essential protein kinase in Mycobacterium tuberculosis.
Park ST, Kang CM, Husson RN., Proc. Natl. Acad. Sci. U.S.A. 105(35), 2008
PMID: 18728196
Phylogenetic analysis of the genus Corynebacterium based on 16S rRNA gene sequences.
Pascual C, Lawson PA, Farrow JA, Gimenez MN, Collins MD., Int. J. Syst. Bacteriol. 45(4), 1995
PMID: 7547291
Promoters of Corynebacterium glutamicum.
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12.
Perez-Rueda E, Collado-Vides J., Nucleic Acids Res. 28(8), 2000
PMID: 10734204
Genomic position analyses and the transcription machinery.
Perez-Rueda E, Gralla JD, Collado-Vides J., J. Mol. Biol. 275(2), 1998
PMID: 9466899
Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea.
Perez-Rueda E, Collado-Vides J, Segovia L., Comput Biol Chem 28(5-6), 2004
PMID: 15556475
Scaling relationship in the gene content of transcriptional machinery in bacteria.
Perez-Rueda E, Janga SC, Martinez-Antonio A., Mol Biosyst 5(12), 2009
PMID: 19763344
Biotechnological manufacture of lysine.
Pfefferle W, Mockel B, Bathe B, Marx A., Adv. Biochem. Eng. Biotechnol. 79(), 2003
PMID: 12523389
Recent developments in bacterial cold-shock response.
Phadtare S., Curr Issues Mol Biol 6(2), 2004
PMID: 15119823
Characterization of citrate utilization in Corynebacterium glutamicum by transcriptome and proteome analysis.
Polen T, Schluesener D, Poetsch A, Bott M, Wendisch VF., FEMS Microbiol. Lett. 273(1), 2007
PMID: 17559405
A novel method for accurate operon predictions in all sequenced prokaryotes.
Price MN, Huang KH, Alm EJ, Arkin AP., Nucleic Acids Res. 33(3), 2005
PMID: 15701760
The three tricarboxylate synthase activities of Corynebacterium glutamicum and increase of L-lysine synthesis.
Radmacher E, Eggeling L., Appl. Microbiol. Biotechnol. 76(3), 2007
PMID: 17653710
The TetR family of transcriptional repressors.
Ramos JL, Martinez-Bueno M, Molina-Henares AJ, Teran W, Watanabe K, Zhang X, Gallegos MT, Brennan R, Tobes R., Microbiol. Mol. Biol. Rev. 69(2), 2005
PMID: 15944459
Evolution of protein superfamilies and bacterial genome size.
Ranea JA, Buchan DW, Thornton JM, Orengo CA., J. Mol. Biol. 336(4), 2004
PMID: 15095866
Modular analysis of the transcriptional regulatory network of E. coli.
Resendis-Antonio O, Freyre-Gonzalez JA, Menchaca-Mendez R, Gutierrez-Rios RM, Martinez-Antonio A, Avila-Sanchez C, Collado-Vides J., Trends Genet. 21(1), 2005
PMID: 15680508
Identification of novel anti-angiogenic factors by in silico functional gene screening method.
Lee SK, Choi YS, Cha J, Moon EJ, Lee SW, Bae MK, Sohn TK, Won Y, Ma S, Kong EB, Lee H, Lim S, Chang D, Kim YJ, Kim CW, Zhang BT, Kim KW., J. Biotechnol. 105(1-2), 2003
PMID: 14511909
The McbR repressor modulated by the effector substance S-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism of Corynebacterium glutamicum ATCC 13032.
Rey DA, Nentwich SS, Koch DJ, Ruckert C, Puhler A, Tauch A, Kalinowski J., Mol. Microbiol. 56(4), 2005
PMID: 15853877
Genomic analysis of zinc homeostasis in Mycobacterium tuberculosis.
Riccardi G, Milano A, Pasca MR, Nies DH., FEMS Microbiol. Lett. 287(1), 2008
PMID: 18752625
Reconstructing biological networks using conditional correlation analysis.
Rice JJ, Tu Y, Stolovitzky G., Bioinformatics 21(6), 2004
PMID: 15486043
Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies.
Rigali S, Derouaux A, Giannotta F, Dusart J., J. Biol. Chem. 277(15), 2001
PMID: 11756427
Comparative genomic reconstruction of transcriptional regulatory networks in bacteria.
Rodionov DA., Chem. Rev. 107(8), 2007
PMID: 17636889
Identification of a bacterial regulatory system for ribonucleotide reductases by phylogenetic profiling.
Rodionov DA, Gelfand MS., Trends Genet. 21(7), 2005
PMID: 15949864
Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms.
Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS., J. Biol. Chem. 277(50), 2002
PMID: 12376536
Transcriptional regulation of NAD metabolism in bacteria: NrtR family of Nudix-related regulators.
Rodionov DA, De Ingeniis J, Mancini C, Cimadamore F, Zhang H, Osterman AL, Raffaelli N., Nucleic Acids Res. 36(6), 2008
PMID: 18276643
Negative autoregulation speeds the response times of transcription networks.
Rosenfeld N, Elowitz MB, Alon U., J. Mol. Biol. 323(5), 2002
PMID: 12417193
The dual transcriptional regulator CysR in Corynebacterium glutamicum ATCC 13032 controls a subset of genes of the McbR regulon in response to the availability of sulphide acceptor molecules.
Ruckert C, Milse J, Albersmeier A, Koch DJ, Puhler A, Kalinowski J., BMC Genomics 9(), 2008
PMID: 18854009
Crystal structure of the caseinolytic protease gene regulator, a transcriptional activator in actinomycetes.
Russo S, Schweitzer JE, Polen T, Bott M, Pohl E., J. Biol. Chem. 284(8), 2008
PMID: 19019826
The sigma factors of Mycobacterium tuberculosis: regulation of the regulators.
Sachdeva P, Misra R, Tyagi AK, Singh Y., FEBS J. 277(3), 2009
PMID: 19951358
Target genes and DNA-binding sites of the response regulator PhoR from Corynebacterium glutamicum.
Schaaf S, Bott M., J. Bacteriol. 189(14), 2007
PMID: 17496102
A high-resolution reference map for cytoplasmic and membrane-associated proteins of Corynebacterium glutamicum.
Schaffer S, Weil B, Nguyen VD, Dongmann G, Gunther K, Nickolaus M, Hermann T, Bott M., Electrophoresis 22(20), 2001
PMID: 11824608
The Zur regulon of Corynebacterium glutamicum ATCC 13032.
Schroder J, Jochmann N, Rodionov DA, Tauch A., BMC Genomics 11(), 2010
PMID: 20055984
Genetic and biochemical analysis of the serine/threonine protein kinases PknA, PknB, PknG and PknL of Corynebacterium glutamicum: evidence for non-essentiality and for phosphorylation of OdhI and FtsZ by multiple kinases.
Schultz C, Niebisch A, Schwaiger A, Viets U, Metzger S, Bramkamp M, Bott M., Mol. Microbiol. 74(3), 2009
PMID: 19788543
The serine hydroxymethyltransferase gene glyA in Corynebacterium glutamicum is controlled by GlyR.
Schweitzer JE, Stolz M, Diesveld R, Etterich H, Eggeling L., J. Biotechnol. 139(3), 2008
PMID: 19124047
The transcriptional regulators RamA and RamB are involved in the regulation of glycogen synthesis in Corynebacterium glutamicum.
Seibold GM, Hagmann CT, Schietzel M, Emer D, Auchter M, Schreiner J, Eikmanns BJ., Microbiology (Reading, Engl.) 156(Pt 4), 2010
PMID: 20056699
Transcriptional regulatory networks in bacteria: from input signals to output responses.
Seshasayee AS, Bertone P, Fraser GM, Luscombe NM., Curr. Opin. Microbiol. 9(5), 2006
PMID: 16942903
Genomic analysis and identification of catabolic pathways for aromatic compounds in Corynebacterium glutamicum
Shen, Microbes Environ 20(), 2005
Functional identification of novel genes involved in the glutathione-independent gentisate pathway in Corynebacterium glutamicum.
Shen XH, Jiang CY, Huang Y, Liu ZP, Liu SJ., Appl. Environ. Microbiol. 71(7), 2005
PMID: 16000747
Network motifs in the transcriptional regulation network of Escherichia coli.
Shen-Orr SS, Milo R, Mangan S, Alon U., Nat. Genet. 31(1), 2002
PMID: 11967538
Development and experimental verification of a genome-scale metabolic model for Corynebacterium glutamicum.
Shinfuku Y, Sorpitiporn N, Sono M, Furusawa C, Hirasawa T, Shimizu H., Microb. Cell Fact. 8(), 2009
PMID: 19646286
Application of global analysis techniques to Corynebacterium glutamicum: new insights into nitrogen regulation.
Silberbach M, Burkovski A., J. Biotechnol. 126(1), 2006
PMID: 16698104
DNA microarray analysis of the nitrogen starvation response of Corynebacterium glutamicum.
Silberbach M, Huser A, Kalinowski J, Puhler A, Walter B, Kramer R, Burkovski A., J. Biotechnol. 119(4), 2005
PMID: 15935503
Adaptation of Corynebacterium glutamicum to ammonium limitation: a global analysis using transcriptome and proteome techniques.
Silberbach M, Schafer M, Huser AT, Kalinowski J, Puhler A, Kramer R, Burkovski A., Appl. Environ. Microbiol. 71(5), 2005
PMID: 15870326
Identification of glyA (encoding serine hydroxymethyltransferase) and its use together with the exporter ThrE to increase L-threonine accumulation by Corynebacterium glutamicum.
Simic P, Willuhn J, Sahm H, Eggeling L., Appl. Environ. Microbiol. 68(7), 2002
PMID: 12089010
Regulation and activity of a zinc uptake regulator, Zur, in Corynebacterium diphtheriae.
Smith KF, Bibb LA, Schmitt MP, Oram DM., J. Bacteriol. 191(5), 2008
PMID: 19074382

AUTHOR UNKNOWN, 0
Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production.
Stansen C, Uy D, Delaunay S, Eggeling L, Goergen JL, Wendisch VF., Appl. Environ. Microbiol. 71(10), 2005
PMID: 16204505
Regulation of GlnK activity: modification, membrane sequestration and proteolysis as regulatory principles in the network of nitrogen control in Corynebacterium glutamicum.
Strosser J, Ludke A, Schaffer S, Kramer R, Burkovski A., Mol. Microbiol. 54(1), 2004
PMID: 15458411
Transcriptional regulation of Corynebacterium glutamicum methionine biosynthesis genes in response to methionine supplementation under oxygen deprivation.
Suda M, Teramoto H, Imamiya T, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 81(3), 2008
PMID: 18800184
Characterization of developmental colony formation in Corynebacterium glutamicum.
Takano H, Shimizu A, Shibosawa R, Sasaki R, Iwagaki S, Minagawa O, Yamanaka K, Miwa K, Beppu T, Ueda K., Appl. Microbiol. Biotechnol. 81(1), 2008
PMID: 18696061
Anaerobic growth and potential for amino acid production by nitrate respiration in Corynebacterium glutamicum.
Takeno S, Ohnishi J, Komatsu T, Masaki T, Sen K, Ikeda M., Appl. Microbiol. Biotechnol. 75(5), 2007
PMID: 17380327
Regulation of the expression of phosphoenolpyruvate: carbohydrate phosphotransferase system (PTS) genes in Corynebacterium glutamicum R.
Tanaka Y, Okai N, Teramoto H, Inui M, Yukawa H., Microbiology (Reading, Engl.) 154(Pt 1), 2008
PMID: 18174145
Regulation of expression of general components of the phosphoenolpyruvate: carbohydrate phosphotransferase system (PTS) by the global regulator SugR in Corynebacterium glutamicum.
Tanaka Y, Teramoto H, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 78(2), 2008
PMID: 18183389
A genomic perspective on protein families.
Tatusov RL, Koonin EV, Lipman DJ., Science 278(5338), 1997
PMID: 9381173
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehoever P, Gartemann KH, Arnold W, Blom J, Brinkrolf K, Brune I, Gotker S, Weisshaar B, Goesmann A, Droge M, Puhler A., J. Biotechnol. 136(1-2), 2008
PMID: 18430482
Regulation of expression of genes involved in quinate and shikimate utilization in Corynebacterium glutamicum.
Teramoto H, Inui M, Yukawa H., Appl. Environ. Microbiol. 75(11), 2009
PMID: 19376919
NrdR controls differential expression of the Escherichia coli ribonucleotide reductase genes.
Torrents E, Grinberg I, Gorovitz-Harris B, Lundstrom H, Borovok I, Aharonowitz Y, Sjoberg BM, Cohen G., J. Bacteriol. 189(14), 2007
PMID: 17496099
Iron and oxidative stress in bacteria.
Touati D., Arch. Biochem. Biophys. 373(1), 2000
PMID: 10620317
Expression of the gapA gene encoding glyceraldehyde-3-phosphate dehydrogenase of Corynebacterium glutamicum is regulated by the global regulator SugR.
Toyoda K, Teramoto H, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 81(2), 2008
PMID: 18791709
Involvement of the LuxR-type transcriptional regulator RamA in regulation of expression of the gapA gene, encoding glyceraldehyde-3-phosphate dehydrogenase of Corynebacterium glutamicum.
Toyoda K, Teramoto H, Inui M, Yukawa H., J. Bacteriol. 191(3), 2008
PMID: 19047347
Molecular mechanism of SugR-mediated sugar-dependent expression of the ldhA gene encoding L-lactate dehydrogenase in Corynebacterium glutamicum.
Toyoda K, Teramoto H, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 83(2), 2009
PMID: 19221735
The ldhA gene, encoding fermentative L-lactate dehydrogenase of Corynebacterium glutamicum, is under the control of positive feedback regulation mediated by LldR.
Toyoda K, Teramoto H, Inui M, Yukawa H., J. Bacteriol. 191(13), 2009
PMID: 19429617
Characterization of methionine export in Corynebacterium glutamicum.
Trotschel C, Deutenberg D, Bathe B, Burkovski A, Kramer R., J. Bacteriol. 187(11), 2005
PMID: 15901702
Screening method for microorganisms accumulating metabolites and its use in the isolation of Micrococcus glutamicus.
UDAKA S., J. Bacteriol. 79(), 1960
PMID: 13840150
Reconstructing prokaryotic transcriptional regulatory networks: lessons from actinobacteria.
Venancio TM, Aravind L., J. Biol. 8(3), 2009
PMID: 19435474
How high G+C Gram-positive bacteria and in particular bifidobacteria cope with heat stress: protein players and regulators.
Ventura M, Canchaya C, Zhang Z, Bernini V, Fitzgerald GF, van Sinderen D., FEMS Microbiol. Rev. 30(5), 2006
PMID: 16911042
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum.
Ventura M, Canchaya C, Tauch A, Chandra G, Fitzgerald GF, Chater KF, van Sinderen D., Microbiol. Mol. Biol. Rev. 71(3), 2007
PMID: 17804669
Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation.
Vitreschak AG, Rodionov DA, Mironov AA, Gelfand MS., Nucleic Acids Res. 30(14), 2002
PMID: 12136096
A new type of transporter with a new type of cellular function: L-lysine export from Corynebacterium glutamicum.
Vrljic M, Sahm H, Eggeling L., Mol. Microbiol. 22(5), 1996
PMID: 8971704
Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli.
Walker GC., Microbiol. Rev. 48(1), 1984
PMID: 6371470
Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme.
Walter B, Hanssler E, Kalinowski J, Burkovski A., J. Mol. Microbiol. Biotechnol. 12(1-2), 2007
PMID: 17183220
The role of the Corynebacterium glutamicum rel gene in (p)ppGpp metabolism.
Wehmeier L, Schafer A, Burkovski A, Kramer R, Mechold U, Malke H, Puhler A, Kalinowski J., Microbiology (Reading, Engl.) 144 ( Pt 7)(), 1998
PMID: 9695918
Genome-wide expression analysis in Corynebacterium glutamicum using DNA microarrays.
Wendisch VF., J. Biotechnol. 104(1-3), 2003
PMID: 12948645
Metabolic engineering of Escherichia coli and Corynebacterium glutamicum for biotechnological production of organic acids and amino acids.
Wendisch VF, Bott M, Eikmanns BJ., Curr. Opin. Microbiol. 9(3), 2006
PMID: 16617034
The DtxR regulon of Corynebacterium glutamicum.
Wennerhold J, Bott M., J. Bacteriol. 188(8), 2006
PMID: 16585752
The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR.
Wennerhold J, Krug A, Bott M., J. Biol. Chem. 280(49), 2005
PMID: 16179344
Genomic analysis of gene expression relationships in transcriptional regulatory networks.
Yu H, Luscombe NM, Qian J, Gerstein M., Trends Genet. 19(8), 2003
PMID: 12902159
Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.
Yukawa H, Omumasaba CA, Nonaka H, Kos P, Okai N, Suzuki N, Suda M, Tsuge Y, Watanabe J, Ikeda Y, Vertes AA, Inui M., Microbiology (Reading, Engl.) 153(Pt 4), 2007
PMID: 17379713
Chromosomally encoded small antisense RNA in Corynebacterium glutamicum.
Zemanova M, Kaderabkova P, Patek M, Knoppova M, Silar R, Nesvera J., FEMS Microbiol. Lett. 279(2), 2007
PMID: 18093135
PcaO positively regulates pcaHG of the beta-ketoadipate pathway in Corynebacterium glutamicum.
Zhao KX, Huang Y, Chen X, Wang NX, Liu SJ., J. Bacteriol. 192(6), 2010
PMID: 20081038
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