Live-cell super-resolution imaging with trimethoprim conjugates
Wombacher R, Heidbreder M, van de Linde S, Sheetz MP, Heilemann M, Cornish VW, Sauer M (2010)
NATURE METHODS 7(9): 717-719.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
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Autor*in
Wombacher, Richard;
Heidbreder, MeikeUniBi;
van de Linde, SebastianUniBi;
Sheetz, Michael P.;
Heilemann, MikeUniBi;
Cornish, Virginia W.;
Sauer, MarkusUniBi
Einrichtung
Abstract / Bemerkung
The spatiotemporal resolution of subdiffraction fluorescence imaging has been limited by the difficulty of labeling proteins in cells with suitable fluorophores. Here we report a chemical tag that allows proteins to be labeled with an organic fluorophore with high photon flux and fast photoswitching performance in live cells. This label allowed us to image the dynamics of human histone H2B protein in living cells at similar to 20 nm resolution.
Erscheinungsjahr
2010
Zeitschriftentitel
NATURE METHODS
Band
7
Ausgabe
9
Seite(n)
717-719
ISSN
1548-7091
eISSN
1548-7105
Page URI
https://pub.uni-bielefeld.de/record/1794049
Zitieren
Wombacher R, Heidbreder M, van de Linde S, et al. Live-cell super-resolution imaging with trimethoprim conjugates. NATURE METHODS. 2010;7(9):717-719.
Wombacher, R., Heidbreder, M., van de Linde, S., Sheetz, M. P., Heilemann, M., Cornish, V. W., & Sauer, M. (2010). Live-cell super-resolution imaging with trimethoprim conjugates. NATURE METHODS, 7(9), 717-719. https://doi.org/10.1038/NMETH.1489
Wombacher, Richard, Heidbreder, Meike, van de Linde, Sebastian, Sheetz, Michael P., Heilemann, Mike, Cornish, Virginia W., and Sauer, Markus. 2010. “Live-cell super-resolution imaging with trimethoprim conjugates”. NATURE METHODS 7 (9): 717-719.
Wombacher, R., Heidbreder, M., van de Linde, S., Sheetz, M. P., Heilemann, M., Cornish, V. W., and Sauer, M. (2010). Live-cell super-resolution imaging with trimethoprim conjugates. NATURE METHODS 7, 717-719.
Wombacher, R., et al., 2010. Live-cell super-resolution imaging with trimethoprim conjugates. NATURE METHODS, 7(9), p 717-719.
R. Wombacher, et al., “Live-cell super-resolution imaging with trimethoprim conjugates”, NATURE METHODS, vol. 7, 2010, pp. 717-719.
Wombacher, R., Heidbreder, M., van de Linde, S., Sheetz, M.P., Heilemann, M., Cornish, V.W., Sauer, M.: Live-cell super-resolution imaging with trimethoprim conjugates. NATURE METHODS. 7, 717-719 (2010).
Wombacher, Richard, Heidbreder, Meike, van de Linde, Sebastian, Sheetz, Michael P., Heilemann, Mike, Cornish, Virginia W., and Sauer, Markus. “Live-cell super-resolution imaging with trimethoprim conjugates”. NATURE METHODS 7.9 (2010): 717-719.
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Endesfelder U, Heilemann M., Nat Methods 11(3), 2014
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Optimized delivery of fluorescently labeled proteins in live bacteria using electroporation.
Sustarsic M, Plochowietz A, Aigrain L, Yuzenkova Y, Zenkin N, Kapanidis A., Histochem Cell Biol 142(1), 2014
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Imaging fenestrations in liver sinusoidal endothelial cells by optical localization microscopy.
Mönkemöller V, Schüttpelz M, McCourt P, Sørensen K, Smedsrød B, Huser T., Phys Chem Chem Phys 16(24), 2014
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Super-resolution molecular and functional imaging of nanoscale architectures in life and materials science.
Habuchi S., Front Bioeng Biotechnol 2(), 2014
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Technical review: types of imaging-direct STORM.
Jensen E, Crossman DJ., Anat Rec (Hoboken) 297(12), 2014
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Cross-talk-free multi-color STORM imaging using a single fluorophore.
Tam J, Cordier GA, Borbely JS, Sandoval Álvarez A, Lakadamyali M., PLoS One 9(7), 2014
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A spontaneously blinking fluorophore based on intramolecular spirocyclization for live-cell super-resolution imaging.
Uno SN, Kamiya M, Yoshihara T, Sugawara K, Okabe K, Tarhan MC, Fujita H, Funatsu T, Okada Y, Tobita S, Urano Y., Nat Chem 6(8), 2014
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Retrieving the intracellular topology from multi-scale protein mobility mapping in living cells.
Baum M, Erdel F, Wachsmuth M, Rippe K., Nat Commun 5(), 2014
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De novo-designed enzymes as small-molecule-regulated fluorescence imaging tags and fluorescent reporters.
Liu Y, Zhang X, Tan YL, Bhabha G, Ekiert DC, Kipnis Y, Bjelic S, Baker D, Kelly JW., J Am Chem Soc 136(38), 2014
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Godin AG, Lounis B, Cognet L., Biophys J 107(8), 2014
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A general strategy for developing cell-permeable photo-modulatable organic fluorescent probes for live-cell super-resolution imaging.
Pan D, Hu Z, Qiu F, Huang ZL, Ma Y, Wang Y, Qin L, Zhang Z, Zeng S, Zhang YH., Nat Commun 5(), 2014
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Single-molecule coordinate-based analysis of the morphology of HIV-1 assembly sites with near-molecular spatial resolution.
Malkusch S, Muranyi W, Müller B, Kräusslich HG, Heilemann M., Histochem Cell Biol 139(1), 2013
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Malkusch S, Muranyi W, Müller B, Kräusslich HG, Heilemann M., Histochem Cell Biol 139(1), 2013
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What precision-protein-tuning and nano-resolved single molecule sciences can do for each other.
Milles S, Lemke EA., Bioessays 35(1), 2013
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A common diaryl ether intermediate for the gram-scale synthesis of oxazine and xanthene fluorophores.
Anzalone AV, Wang TY, Chen Z, Cornish VW., Angew Chem Int Ed Engl 52(2), 2013
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Investigating cellular structures at the nanoscale with organic fluorophores.
van de Linde S, Aufmkolk S, Franke C, Holm T, Klein T, Löschberger A, Proppert S, Wolter S, Sauer M., Chem Biol 20(1), 2013
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Design, synthesis, and application of the trimethoprim-based chemical tag for live-cell imaging.
Jing C, Cornish VW., Curr Protoc Chem Biol 5(2), 2013
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A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins.
Lukinavičius G, Umezawa K, Olivier N, Honigmann A, Yang G, Plass T, Mueller V, Reymond L, Corrêa IR, Luo ZG, Schultz C, Lemke EA, Heppenstall P, Eggeling C, Manley S, Johnsson K., Nat Chem 5(2), 2013
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Quantifying spatial organization in point-localization superresolution images using pair correlation analysis.
Sengupta P, Jovanovic-Talisman T, Lippincott-Schwartz J., Nat Protoc 8(2), 2013
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Investigating infection processes with a workflow from organic chemistry to biophysics: the combination of metabolic glycoengineering, super-resolution fluorescence imaging and proteomics.
Seibel J, König S, Göhler A, Doose S, Memmel E, Bertleff N, Sauer M., Expert Rev Proteomics 10(1), 2013
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Correlative live-cell and superresolution microscopy reveals cargo transport dynamics at microtubule intersections.
Bálint Š, Verdeny Vilanova I, Sandoval Álvarez Á, Lakadamyali M., Proc Natl Acad Sci U S A 110(9), 2013
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Single cell optical imaging and spectroscopy.
Stender AS, Marchuk K, Liu C, Sander S, Meyer MW, Smith EA, Neupane B, Wang G, Li J, Cheng JX, Huang B, Fang N., Chem Rev 113(4), 2013
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Single-molecule methods for studying gene regulation in vivo.
Hensel Z, Xiao J., Pflugers Arch 465(3), 2013
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Zooming in on biological processes with fluorescence nanoscopy.
Agrawal U, Reilly DT, Schroeder CM., Curr Opin Biotechnol 24(4), 2013
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Fluorescence microscopy-a historical and technical perspective.
Renz M., Cytometry A 83(9), 2013
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Fluorescent amino acids: modular building blocks for the assembly of new tools for chemical biology.
Krueger AT, Imperiali B., Chembiochem 14(7), 2013
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Advances in superresolution optical fluctuation imaging (SOFI).
Dertinger T, Pallaoro A, Braun G, Ly S, Laurence TA, Weiss S., Q Rev Biophys 46(2), 2013
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Imaging cells at the nanoscale.
Cox S, Jones GE., Int J Biochem Cell Biol 45(8), 2013
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Fluorescence nanoscopy. Methods and applications.
Requejo-Isidro J., J Chem Biol 6(3), 2013
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Chemical tags: inspiration for advanced imaging techniques.
Chen Z, Cornish VW, Min W., Curr Opin Chem Biol 17(4), 2013
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Optical control and study of biological processes at the single-cell level in a live organism.
Feng Z, Zhang W, Xu J, Gauron C, Ducos B, Vriz S, Volovitch M, Jullien L, Weiss S, Bensimon D., Rep Prog Phys 76(7), 2013
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Transcription-factor-mediated DNA looping probed by high-resolution, single-molecule imaging in live E. coli cells.
Hensel Z, Weng X, Lagda AC, Xiao J., PLoS Biol 11(6), 2013
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Hensel Z, Weng X, Lagda AC, Xiao J., PLoS Biol 11(6), 2013
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A fluorogenic TMP-tag for high signal-to-background intracellular live cell imaging.
Jing C, Cornish VW., ACS Chem Biol 8(8), 2013
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Jing C, Cornish VW., ACS Chem Biol 8(8), 2013
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Seeing the forest tree by tree: super-resolution light microscopy meets the neurosciences.
Maglione M, Sigrist SJ., Nat Neurosci 16(7), 2013
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Labeling Cytosolic Targets in Live Cells with Blinking Probes.
Xu J, Chang J, Yan Q, Dertinger T, Bruchez M, Weiss S., J Phys Chem Lett 4(13), 2013
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Shedding new light on viruses: super-resolution microscopy for studying human immunodeficiency virus.
Müller B, Heilemann M., Trends Microbiol 21(10), 2013
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Müller B, Heilemann M., Trends Microbiol 21(10), 2013
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Single-molecule localization microscopy-near-molecular spatial resolution in light microscopy with photoswitchable fluorophores.
Fürstenberg A, Heilemann M., Phys Chem Chem Phys 15(36), 2013
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Test samples for optimizing STORM super-resolution microscopy.
Metcalf DJ, Edwards R, Kumarswami N, Knight AE., J Vis Exp (79), 2013
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Super-resolution mbPAINT for optical localization of single-stranded DNA.
Chen J, Bremauntz A, Kisley L, Shuang B, Landes CF., ACS Appl Mater Interfaces 5(19), 2013
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Sample preparation for single molecule localization microscopy.
Allen JR, Ross ST, Davidson MW., Phys Chem Chem Phys 15(43), 2013
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Recent advances in super-resolution fluorescence imaging and its applications in biology.
Han R, Li Z, Fan Y, Jiang Y., J Genet Genomics 40(12), 2013
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Han R, Li Z, Fan Y, Jiang Y., J Genet Genomics 40(12), 2013
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Long-lived intracellular single-molecule fluorescence using electroporated molecules.
Crawford R, Torella JP, Aigrain L, Plochowietz A, Gryte K, Uphoff S, Kapanidis AN., Biophys J 105(11), 2013
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Crawford R, Torella JP, Aigrain L, Plochowietz A, Gryte K, Uphoff S, Kapanidis AN., Biophys J 105(11), 2013
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Coordinate-based colocalization analysis of single-molecule localization microscopy data.
Malkusch S, Endesfelder U, Mondry J, Gelléri M, Verveer PJ, Heilemann M., Histochem Cell Biol 137(1), 2012
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Malkusch S, Endesfelder U, Mondry J, Gelléri M, Verveer PJ, Heilemann M., Histochem Cell Biol 137(1), 2012
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Mapping of surface-enhanced fluorescence on metal nanoparticles using super-resolution photoactivation localization microscopy.
Lin H, Centeno SP, Su L, Kenens B, Rocha S, Sliwa M, Hofkens J, Uji-i H., Chemphyschem 13(4), 2012
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Lin H, Centeno SP, Su L, Kenens B, Rocha S, Sliwa M, Hofkens J, Uji-i H., Chemphyschem 13(4), 2012
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Super-resolution fluorescence imaging of chromosomal DNA.
Zessin PJ, Finan K, Heilemann M., J Struct Biol 177(2), 2012
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Zessin PJ, Finan K, Heilemann M., J Struct Biol 177(2), 2012
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Advances in light-based imaging of three-dimensional cellular ultrastructure.
Kanchanawong P, Waterman CM., Curr Opin Cell Biol 24(1), 2012
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Kanchanawong P, Waterman CM., Curr Opin Cell Biol 24(1), 2012
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Live-cell dSTORM of cellular DNA based on direct DNA labeling.
Benke A, Manley S., Chembiochem 13(2), 2012
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Benke A, Manley S., Chembiochem 13(2), 2012
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Multi-colour direct STORM with red emitting carbocyanines.
Lampe A, Haucke V, Sigrist SJ, Heilemann M, Schmoranzer J., Biol Cell 104(4), 2012
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Lampe A, Haucke V, Sigrist SJ, Heilemann M, Schmoranzer J., Biol Cell 104(4), 2012
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Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging.
Ha T, Tinnefeld P., Annu Rev Phys Chem 63(), 2012
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Live-cell super-resolution imaging with synthetic fluorophores.
van de Linde S, Heilemann M, Sauer M., Annu Rev Phys Chem 63(), 2012
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van de Linde S, Heilemann M, Sauer M., Annu Rev Phys Chem 63(), 2012
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Quantitative analysis of photoactivated localization microscopy (PALM) datasets using pair-correlation analysis.
Sengupta P, Lippincott-Schwartz J., Bioessays 34(5), 2012
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Amino acids for Diels-Alder reactions in living cells.
Plass T, Milles S, Koehler C, Szymański J, Mueller R, Wiessler M, Schultz C, Lemke EA., Angew Chem Int Ed Engl 51(17), 2012
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Triple-color super-resolution imaging of live cells: resolving submicroscopic receptor organization in the plasma membrane.
Wilmes S, Staufenbiel M, Lisse D, Richter CP, Beutel O, Busch KB, Hess ST, Piehler J., Angew Chem Int Ed Engl 51(20), 2012
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Wilmes S, Staufenbiel M, Lisse D, Richter CP, Beutel O, Busch KB, Hess ST, Piehler J., Angew Chem Int Ed Engl 51(20), 2012
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Superresolution imaging of HIV in infected cells with FlAsH-PALM.
Lelek M, Di Nunzio F, Henriques R, Charneau P, Arhel N, Zimmer C., Proc Natl Acad Sci U S A 109(22), 2012
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Lelek M, Di Nunzio F, Henriques R, Charneau P, Arhel N, Zimmer C., Proc Natl Acad Sci U S A 109(22), 2012
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Super-resolution imaging reveals the internal architecture of nano-sized syntaxin clusters.
Bar-On D, Wolter S, van de Linde S, Heilemann M, Nudelman G, Nachliel E, Gutman M, Sauer M, Ashery U., J Biol Chem 287(32), 2012
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Bar-On D, Wolter S, van de Linde S, Heilemann M, Nudelman G, Nachliel E, Gutman M, Sauer M, Ashery U., J Biol Chem 287(32), 2012
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Fluorescence localization microscopy: The transition from concept to biological research tool.
Owen DM, Sauer M, Gaus K., Commun Integr Biol 5(4), 2012
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Owen DM, Sauer M, Gaus K., Commun Integr Biol 5(4), 2012
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A fractal model for nuclear organization: current evidence and biological implications.
Bancaud A, Lavelle C, Huet S, Ellenberg J., Nucleic Acids Res 40(18), 2012
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Live-cell super-resolution imaging goes multicolor.
Klein T, van de Linde S, Sauer M., Chembiochem 13(13), 2012
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Klein T, van de Linde S, Sauer M., Chembiochem 13(13), 2012
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Mapping protein-specific micro-environments in live cells by fluorescence lifetime imaging of a hybrid genetic-chemical molecular rotor tag.
Gatzogiannis E, Chen Z, Wei L, Wombacher R, Kao YT, Yefremov G, Cornish VW, Min W., Chem Commun (Camb) 48(69), 2012
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Gatzogiannis E, Chen Z, Wei L, Wombacher R, Kao YT, Yefremov G, Cornish VW, Min W., Chem Commun (Camb) 48(69), 2012
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Features of endogenous cardiomyocyte chromatin revealed by super-resolution STED microscopy.
Mitchell-Jordan S, Chen H, Franklin S, Stefani E, Bentolila LA, Vondriska TM., J Mol Cell Cardiol 53(4), 2012
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Mitchell-Jordan S, Chen H, Franklin S, Stefani E, Bentolila LA, Vondriska TM., J Mol Cell Cardiol 53(4), 2012
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Second-generation covalent TMP-tag for live cell imaging.
Chen Z, Jing C, Gallagher SS, Sheetz MP, Cornish VW., J Am Chem Soc 134(33), 2012
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Super-resolution fluorescence imaging of organelles in live cells with photoswitchable membrane probes.
Shim SH, Xia C, Zhong G, Babcock HP, Vaughan JC, Huang B, Wang X, Xu C, Bi GQ, Zhuang X., Proc Natl Acad Sci U S A 109(35), 2012
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Hybridization and reaction-based fluorogenic nucleic acid probes.
Dutta S, Flottmann B, Heilemann M, Mokhir A., Chem Commun (Camb) 48(77), 2012
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Dutta S, Flottmann B, Heilemann M, Mokhir A., Chem Commun (Camb) 48(77), 2012
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Super-resolution microscopy: a comparative treatment.
Kasuboski JM, Sigal YJ, Joens MS, Lillemeier BF, Fitzpatrick JA., Curr Protoc Cytom Chapter 2(), 2012
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Kasuboski JM, Sigal YJ, Joens MS, Lillemeier BF, Fitzpatrick JA., Curr Protoc Cytom Chapter 2(), 2012
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Single-molecule localization super-resolution microscopy: deeper and faster.
Herbert S, Soares H, Zimmer C, Henriques R., Microsc Microanal 18(6), 2012
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Herbert S, Soares H, Zimmer C, Henriques R., Microsc Microanal 18(6), 2012
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Single-molecule super-resolution imaging in bacteria.
Cattoni DI, Fiche JB, Nöllmann M., Curr Opin Microbiol 15(6), 2012
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Cattoni DI, Fiche JB, Nöllmann M., Curr Opin Microbiol 15(6), 2012
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Visualizing cell structure and function with point-localization superresolution imaging.
Sengupta P, Van Engelenburg S, Lippincott-Schwartz J., Dev Cell 23(6), 2012
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Sengupta P, Van Engelenburg S, Lippincott-Schwartz J., Dev Cell 23(6), 2012
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Nano-fEM: protein localization using photo-activated localization microscopy and electron microscopy.
Watanabe S, Richards J, Hollopeter G, Hobson RJ, Davis WM, Jorgensen EM., J Vis Exp (70), 2012
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Watanabe S, Richards J, Hollopeter G, Hobson RJ, Davis WM, Jorgensen EM., J Vis Exp (70), 2012
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Photoinduced formation of reversible dye radicals and their impact on super-resolution imaging.
van de Linde S, Krstić I, Prisner T, Doose S, Heilemann M, Sauer M., Photochem Photobiol Sci 10(4), 2011
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van de Linde S, Krstić I, Prisner T, Doose S, Heilemann M, Sauer M., Photochem Photobiol Sci 10(4), 2011
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DNA and chromatin imaging with super-resolution fluorescence microscopy based on single-molecule localization.
Flors C., Biopolymers 95(5), 2011
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Flors C., Biopolymers 95(5), 2011
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FRET in cell biology: still shining in the age of super-resolution?
Grecco HE, Verveer PJ., Chemphyschem 12(3), 2011
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Grecco HE, Verveer PJ., Chemphyschem 12(3), 2011
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Live-cell dSTORM with SNAP-tag fusion proteins.
Klein T, Löschberger A, Proppert S, Wolter S, van de Linde S, Sauer M., Nat Methods 8(1), 2011
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Klein T, Löschberger A, Proppert S, Wolter S, van de Linde S, Sauer M., Nat Methods 8(1), 2011
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Nanoscopy of cell architecture: The actin-membrane interface.
Ahmed S., Bioarchitecture 1(1), 2011
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Ahmed S., Bioarchitecture 1(1), 2011
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Super-resolution dynamic imaging of dendritic spines using a low-affinity photoconvertible actin probe.
Izeddin I, Specht CG, Lelek M, Darzacq X, Triller A, Zimmer C, Dahan M., PLoS One 6(1), 2011
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Izeddin I, Specht CG, Lelek M, Darzacq X, Triller A, Zimmer C, Dahan M., PLoS One 6(1), 2011
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PALM and STORM: unlocking live-cell super-resolution.
Henriques R, Griffiths C, Hesper Rego E, Mhlanga MM., Biopolymers 95(5), 2011
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Comparison between SOFI and STORM.
Geissbuehler S, Dellagiacoma C, Lasser T., Biomed Opt Express 2(3), 2011
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Geissbuehler S, Dellagiacoma C, Lasser T., Biomed Opt Express 2(3), 2011
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Principles of chromosomal organization: lessons from yeast.
Zimmer C, Fabre E., J Cell Biol 192(5), 2011
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Measuring localization performance of super-resolution algorithms on very active samples.
Wolter S, Endesfelder U, van de Linde S, Heilemann M, Sauer M., Opt Express 19(8), 2011
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Wolter S, Endesfelder U, van de Linde S, Heilemann M, Sauer M., Opt Express 19(8), 2011
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Chemically induced photoswitching of fluorescent probes--a general concept for super-resolution microscopy.
Endesfelder U, Malkusch S, Flottmann B, Mondry J, Liguzinski P, Verveer PJ, Heilemann M., Molecules 16(4), 2011
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Endesfelder U, Malkusch S, Flottmann B, Mondry J, Liguzinski P, Verveer PJ, Heilemann M., Molecules 16(4), 2011
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Fast, three-dimensional super-resolution imaging of live cells.
Jones SA, Shim SH, He J, Zhuang X., Nat Methods 8(6), 2011
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Jones SA, Shim SH, He J, Zhuang X., Nat Methods 8(6), 2011
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Chemical tags: applications in live cell fluorescence imaging.
Wombacher R, Cornish VW., J Biophotonics 4(6), 2011
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Wombacher R, Cornish VW., J Biophotonics 4(6), 2011
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Cross-linking of DNA through HMGA1 suggests a DNA scaffold.
Vogel B, Löschberger A, Sauer M, Hock R., Nucleic Acids Res 39(16), 2011
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Vogel B, Löschberger A, Sauer M, Hock R., Nucleic Acids Res 39(16), 2011
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Kinetic studies on visible-light-switchable photochromic fluorophores based on diarylethenes.
Seefeldt B, Altenhöner K, Tosic O, Geisler T, Sauer M, Mattay J., Photochem Photobiol Sci 10(9), 2011
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