The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy

Krahn E, Weiss BJR, Krockel M, Groppe J, Henkel G, Cramer SP, Trautwein AX, Schneider K, Müller A (2002)
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7(1-2): 37-45.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Krahn, E; Weiss, BJR; Krockel, M; Groppe, J; Henkel, G; Cramer, SP; Trautwein, AX; Schneider, KlausUniBi; Müller, AchimUniBi
Abstract / Bemerkung
Samples of the dithionite-reduced FeFe protein (the dinitrogenase component of the Fe-only nitrogenase) from Rhodobacter capsulatus have been investigated by Fe-57 Mossbauer spectroscopy and by Fe and Zn EXAFS as well as XANES spectroscopy. The analyses were performed on the basis of data known for the FeMo cofactor and the P cluster of Mo nitrogenases. The prominent Fourier transform peaks of the Fe K-edge spectrum are assigned to Fe-S and Fe-Fe interactions at distances of 2.29 Angstrom and 2.63 Angstrom, respectively. A significant contribution to the Fe EXAFS must be assigned to an Fe backscatterer shell at 3.68 Angstrom, which is an unprecedented feature of the trigonal prismatic arrangement of iron atoms found in the FeMo cofactor of nitrogenase MoFe protein crystal structures. Additional (FeFe)-Fe-... interactions at 2.92 Angstrom and 4.05 Angstrom clearly indicate that the principal geometry, of the P cluster is also conserved. Mossbauer spectra of Fe-57-enriched FeFe protein preparations were recorded at 77 K (20 mT) and 4.2 K (20 mT, 6.2 T), whereby the 4.2 K high-field spectrum clearly demonstrates that the cofactor of the Fe-only nitrogenase (FeFe cofactor) is diamagnetic in the dithionite-reduced ("as isolated") state. The evaluation of the 77 K spectrum is in agreement with the assumption that this cofactor contains eight Fe atoms. In the literature, several genetic and biochemical lines of evidence are presented pointing to a significant structural similarity of the FeFe, the FeMo and and the FeV cofactors. The data reported here provide the first spectroscopic evidence for a structural homology of the FeFe cofactor to the heterometal-containing cofactors, thus substantiating that the FeFe cofactor is the largest iron-sulfur cluster so far found in nature.
Stichworte
extended X-ray absorption fine structure; Mossbauer; FeFe cofactor; Fe nitrogenase; Rhodobacter capsulatus; spectroscopy
Erscheinungsjahr
2002
Zeitschriftentitel
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY
Band
7
Ausgabe
1-2
Seite(n)
37-45
ISSN
0949-8257
Page URI
https://pub.uni-bielefeld.de/record/1615591

Zitieren

Krahn E, Weiss BJR, Krockel M, et al. The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY. 2002;7(1-2):37-45.
Krahn, E., Weiss, B. J. R., Krockel, M., Groppe, J., Henkel, G., Cramer, S. P., Trautwein, A. X., et al. (2002). The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 7(1-2), 37-45. https://doi.org/10.1007/s007750100263
Krahn, E, Weiss, BJR, Krockel, M, Groppe, J, Henkel, G, Cramer, SP, Trautwein, AX, Schneider, Klaus, and Müller, Achim. 2002. “The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy”. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7 (1-2): 37-45.
Krahn, E., Weiss, B. J. R., Krockel, M., Groppe, J., Henkel, G., Cramer, S. P., Trautwein, A. X., Schneider, K., and Müller, A. (2002). The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7, 37-45.
Krahn, E., et al., 2002. The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 7(1-2), p 37-45.
E. Krahn, et al., “The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy”, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, vol. 7, 2002, pp. 37-45.
Krahn, E., Weiss, B.J.R., Krockel, M., Groppe, J., Henkel, G., Cramer, S.P., Trautwein, A.X., Schneider, K., Müller, A.: The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY. 7, 37-45 (2002).
Krahn, E, Weiss, BJR, Krockel, M, Groppe, J, Henkel, G, Cramer, SP, Trautwein, AX, Schneider, Klaus, and Müller, Achim. “The Fe-only nitrogenase from Rhodobacter capsulatus: identification of the cofactor, an unusual, high-nuclearity iron-sulfur cluster, by FeK-edge EXAFS and Fe-57 Mossbauer spectroscopy”. JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7.1-2 (2002): 37-45.

19 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Genetic and Biochemical Analysis of the Azotobacter vinelandii Molybdenum Storage Protein.
Navarro-Rodríguez M, Buesa JM, Rubio LM., Front Microbiol 10(), 2019
PMID: 30984129
Mechanism of N2 Reduction Catalyzed by Fe-Nitrogenase Involves Reductive Elimination of H2.
Harris DF, Lukoyanov DA, Shaw S, Compton P, Tokmina-Lukaszewska M, Bothner B, Kelleher N, Dean DR, Hoffman BM, Seefeldt LC., Biochemistry 57(5), 2018
PMID: 29283553
Exploring the alternatives of biological nitrogen fixation.
Mus F, Alleman AB, Pence N, Seefeldt LC, Peters JW., Metallomics 10(4), 2018
PMID: 29629463
Kinetic Understanding of N2 Reduction versus H2 Evolution at the E4(4H) Janus State in the Three Nitrogenases.
Harris DF, Yang ZY, Dean DR, Seefeldt LC, Hoffman BM., Biochemistry 57(39), 2018
PMID: 30183278
Element strategy of oxygen evolution electrocatalysis based on in situ spectroelectrochemistry.
Ooka H, Takashima T, Yamaguchi A, Hayashi T, Nakamura R., Chem Commun (Camb) 53(53), 2017
PMID: 28466887
The Nitrogenase FeMo-Cofactor Precursor Formed by NifB Protein: A Diamagnetic Cluster Containing Eight Iron Atoms.
Guo Y, Echavarri-Erasun C, Demuez M, Jiménez-Vicente E, Bominaar EL, Rubio LM., Angew Chem Int Ed Engl 55(41), 2016
PMID: 27611968
Nitrogenase and homologs.
Hu Y, Ribbe MW., J Biol Inorg Chem 20(2), 2015
PMID: 25491285
The sixteenth iron in the nitrogenase MoFe protein.
Zhang L, Kaiser JT, Meloni G, Yang KY, Spatzal T, Andrade SL, Einsle O, Howard JB, Rees DC., Angew Chem Int Ed Engl 52(40), 2013
PMID: 23963815
Ligand dependence of binding to three-coordinate Fe(II) complexes.
Chiang KP, Barrett PM, Ding F, Smith JM, Kingsley S, Brennessel WW, Clark MM, Lachicotte RJ, Holland PL., Inorg Chem 48(12), 2009
PMID: 19438179
Structural insights into a protein-bound iron-molybdenum cofactor precursor.
Corbett MC, Hu Y, Fay AW, Ribbe MW, Hedman B, Hodgson KO., Proc Natl Acad Sci U S A 103(5), 2006
PMID: 16423898
Identification of two new genes involved in diazotrophic growth via the alternative Fe-only nitrogenase in the phototrophic purple bacterium Rhodobacter capsulatus.
Sicking C, Brusch M, Lindackers A, Riedel KU, Schubert B, Isakovic N, Krall C, Klipp W, Drepper T, Schneider K, Masepohl B., J Bacteriol 187(1), 2005
PMID: 15601692

References

Daten bereitgestellt von Europe PubMed Central.

Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 11862539
PubMed | Europe PMC

Suchen in

Google Scholar