High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines

Strizhov N, Li Y, Rosso MG, Viehöver P, Dekker K, Weisshaar B (2003)
Biotechniques 35(6): 1164-1168.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Strizhov, Nicolai; Li, Yong; Rosso, Mario G.; Viehöver, PriscaUniBi; Dekker, Koen; Weisshaar, BerndUniBi
Einrichtung
Fakultät für Biologie > Genetik und Genomik der Pflanzen
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Arbeitsgruppe B. Weisshaar
Erscheinungsjahr
2003
Zeitschriftentitel
Biotechniques
Band
35
Ausgabe
6
Seite(n)
1164-1168
ISSN
0736-6205
Page URI
https://pub.uni-bielefeld.de/record/1609377

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Strizhov N, Li Y, Rosso MG, Viehöver P, Dekker K, Weisshaar B. High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines. Biotechniques. 2003;35(6):1164-1168.
Strizhov, N., Li, Y., Rosso, M. G., Viehöver, P., Dekker, K., & Weisshaar, B. (2003). High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines. Biotechniques, 35(6), 1164-1168. https://doi.org/10.2144/03356st01
Strizhov, Nicolai, Li, Yong, Rosso, Mario G., Viehöver, Prisca, Dekker, Koen, and Weisshaar, Bernd. 2003. “High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines”. Biotechniques 35 (6): 1164-1168.
Strizhov, N., Li, Y., Rosso, M. G., Viehöver, P., Dekker, K., and Weisshaar, B. (2003). High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines. Biotechniques 35, 1164-1168.
Strizhov, N., et al., 2003. High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines. Biotechniques, 35(6), p 1164-1168.
N. Strizhov, et al., “High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines”, Biotechniques, vol. 35, 2003, pp. 1164-1168.
Strizhov, N., Li, Y., Rosso, M.G., Viehöver, P., Dekker, K., Weisshaar, B.: High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines. Biotechniques. 35, 1164-1168 (2003).
Strizhov, Nicolai, Li, Yong, Rosso, Mario G., Viehöver, Prisca, Dekker, Koen, and Weisshaar, Bernd. “High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines”. Biotechniques 35.6 (2003): 1164-1168.

15 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Integration of Agrobacterium T-DNA into the Plant Genome.
Gelvin SB., Annu Rev Genet 51(), 2017
PMID: 28853920
An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii.
Li X, Zhang R, Patena W, Gang SS, Blum SR, Ivanova N, Yue R, Robertson JM, Lefebvre PA, Fitz-Gibbon ST, Grossman AR, Jonikas MC., Plant Cell 28(2), 2016
PMID: 26764374
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana.
Huep G, Kleinboelting N, Weisshaar B., Plant Methods 10(), 2014
PMID: 25324895
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database.
Kleinboelting N, Huep G, Kloetgen A, Viehoever P, Weisshaar B., Nucleic Acids Res 40(database issue), 2012
PMID: 22080561
Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and NPC4 with roles in root development and brassinolide signaling in Arabidopsis thaliana.
Wimalasekera R, Pejchar P, Holk A, Martinec J, Scherer GF., Mol Plant 3(3), 2010
PMID: 20507939
A protocol for efficiently retrieving and characterizing flanking sequence tags (FSTs) in Brachypodium distachyon T-DNA insertional mutants.
Thole V, Alves SC, Worland B, Bevan MW, Vain P., Nat Protoc 4(5), 2009
PMID: 19360020
Silencing of a plant gene by transcriptional interference.
Hedtke B, Grimm B., Nucleic Acids Res 37(11), 2009
PMID: 19376832
Agrobacterium-mediated transformation of the temperate grass Brachypodium distachyon (genotype Bd21) for T-DNA insertional mutagenesis.
Vain P, Worland B, Thole V, McKenzie N, Alves SC, Opanowicz M, Fish LJ, Bevan MW, Snape JW., Plant Biotechnol J 6(3), 2008
PMID: 18004984
Getting the most out of publicly available T-DNA insertion lines.
Ulker B, Peiter E, Dixon DP, Moffat C, Capper R, Bouché N, Edwards R, Sanders D, Knight H, Knight MR., Plant J 56(4), 2008
PMID: 18644000
A highly efficient miPCR method for isolating FSTs from transgenic Arabidopsis thaliana plants.
Pogorelko GV, Fursova OV., J Genet 87(2), 2008
PMID: 18776641
GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions.
Li Y, Rosso MG, Viehoever P, Weisshaar B., Nucleic Acids Res 35(database issue), 2007
PMID: 17062622
Microhomologies between T-DNA ends and target sites often occur in inverted orientation and may be responsible for the high frequency of T-DNA-associated inversions.
Müller AE, Atkinson RG, Sandoval RB, Jorgensen RA., Plant Cell Rep 26(5), 2007
PMID: 17205344
Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions.
Li Y, Rosso MG, Ulker B, Weisshaar B., Genomics 87(5), 2006
PMID: 16488113
LucTrap vectors are tools to generate luciferase fusions for the quantification of transcript and protein abundance in vivo.
Calderon-Villalobos LI, Kuhnle C, Li H, Rosso M, Weisshaar B, Schwechheimer C., Plant Physiol 141(1), 2006
PMID: 16684932
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics.
Rosso MG, Li Y, Strizhov N, Reiss B, Dekker K, Weisshaar B., Plant Mol Biol 53(1-2), 2003
PMID: 14756321

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