Extraction of biological interaction networks from scientific literature
Skusa A, Ruegg A, Koehler J (2005)
BRIEFINGS IN BIOINFORMATICS 6(3): 263-276.
Zeitschriftenaufsatz
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Autor*in
Skusa, A;
Ruegg, A;
Koehler, J
Einrichtung
Abstract / Bemerkung
Biology can be regarded as a science of networks: interactions between various biological entities (eg genes, proteins, metabolites) on different levels (eg gene regulation, cell signalling) can be represented as graphs and, thus, analysis of such networks might shed new light on the function of biological systems. Such biological networks can be obtained from different sources. The extraction of networks from text is an important technique that requires the integration of several different computational disciplines. This paper summarises the most important steps in network extraction and reviews common approaches and solutions for the extraction of biological networks from scientific literature.
Stichworte
relation mining;
interaction networks;
network extraction
Erscheinungsjahr
2005
Zeitschriftentitel
BRIEFINGS IN BIOINFORMATICS
Band
6
Ausgabe
3
Seite(n)
263-276
ISSN
1467-5463
eISSN
1477-4054
Page URI
https://pub.uni-bielefeld.de/record/1601899
Zitieren
Skusa A, Ruegg A, Koehler J. Extraction of biological interaction networks from scientific literature. BRIEFINGS IN BIOINFORMATICS. 2005;6(3):263-276.
Skusa, A., Ruegg, A., & Koehler, J. (2005). Extraction of biological interaction networks from scientific literature. BRIEFINGS IN BIOINFORMATICS, 6(3), 263-276. https://doi.org/10.1093/bib/6.3.263
Skusa, A, Ruegg, A, and Koehler, J. 2005. “Extraction of biological interaction networks from scientific literature”. BRIEFINGS IN BIOINFORMATICS 6 (3): 263-276.
Skusa, A., Ruegg, A., and Koehler, J. (2005). Extraction of biological interaction networks from scientific literature. BRIEFINGS IN BIOINFORMATICS 6, 263-276.
Skusa, A., Ruegg, A., & Koehler, J., 2005. Extraction of biological interaction networks from scientific literature. BRIEFINGS IN BIOINFORMATICS, 6(3), p 263-276.
A. Skusa, A. Ruegg, and J. Koehler, “Extraction of biological interaction networks from scientific literature”, BRIEFINGS IN BIOINFORMATICS, vol. 6, 2005, pp. 263-276.
Skusa, A., Ruegg, A., Koehler, J.: Extraction of biological interaction networks from scientific literature. BRIEFINGS IN BIOINFORMATICS. 6, 263-276 (2005).
Skusa, A, Ruegg, A, and Koehler, J. “Extraction of biological interaction networks from scientific literature”. BRIEFINGS IN BIOINFORMATICS 6.3 (2005): 263-276.
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