A Unifying View of Genome Rearrangements

Bergeron A, Mixtacki J, Stoye J (2006)
In: Proc. of WABI 2006. LNBI, 4175. SPRINGER-VERLAG BERLIN: 163-173.

Konferenzbeitrag | Veröffentlicht | Englisch
 
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Autor*in
Bergeron, Anne; Mixtacki, Julia; Stoye, JensUniBi
Abstract / Bemerkung
Genome rearrangements have been modeled by a variety of operations such as inversions, translocations, fissions, fusions, transpositions and block interchanges. The double cut and join operation, introduced by Yancopoulos et al., allows to model all the classical operations while simplifying the algorithms. In this paper we show a simple way to apply this operation to the most general type of genomes with a mixed collection of linear and circular chromosomes. We also describe a graph structure that allows simplifying the theory and distance computation considerably, as neither capping nor concatenation of the linear chromosomes are necessary.
Erscheinungsjahr
2006
Titel des Konferenzbandes
Proc. of WABI 2006
Band
4175
Seite(n)
163-173
Konferenz
WABI 2006
Konferenzort
Zurich, Switzerland
ISSN
0302-9743
Page URI
https://pub.uni-bielefeld.de/record/1596811

Zitieren

Bergeron A, Mixtacki J, Stoye J. A Unifying View of Genome Rearrangements. In: Proc. of WABI 2006. LNBI. Vol 4175. SPRINGER-VERLAG BERLIN; 2006: 163-173.
Bergeron, A., Mixtacki, J., & Stoye, J. (2006). A Unifying View of Genome Rearrangements. Proc. of WABI 2006, LNBI, 4175, 163-173. SPRINGER-VERLAG BERLIN. doi:10.1007/11851561_16
Bergeron, A., Mixtacki, J., and Stoye, J. (2006). “A Unifying View of Genome Rearrangements” in Proc. of WABI 2006 LNBI, vol. 4175, (SPRINGER-VERLAG BERLIN), 163-173.
Bergeron, A., Mixtacki, J., & Stoye, J., 2006. A Unifying View of Genome Rearrangements. In Proc. of WABI 2006. LNBI. no.4175 SPRINGER-VERLAG BERLIN, pp. 163-173.
A. Bergeron, J. Mixtacki, and J. Stoye, “A Unifying View of Genome Rearrangements”, Proc. of WABI 2006, LNBI, vol. 4175, SPRINGER-VERLAG BERLIN, 2006, pp.163-173.
Bergeron, A., Mixtacki, J., Stoye, J.: A Unifying View of Genome Rearrangements. Proc. of WABI 2006. LNBI. 4175, p. 163-173. SPRINGER-VERLAG BERLIN (2006).
Bergeron, Anne, Mixtacki, Julia, and Stoye, Jens. “A Unifying View of Genome Rearrangements”. Proc. of WABI 2006. SPRINGER-VERLAG BERLIN, 2006.Vol. 4175. LNBI. 163-173.