Biochemical applications of surface-enhanced infrared absorption spectroscopy

Ataka K, Heberle J (2007)
ANALYTICAL AND BIOANALYTICAL CHEMISTRY 388(1): 47-54.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Ataka, Kenichi; Heberle, Joachim
Einrichtung
Fakultät für Chemie > Physikalische und Biophysikalische Chemie
Abstract / Bemerkung
An overview is presented on the application of surface-enhanced infrared absorption (SEIRA) spectroscopy to biochemical problems. Use of SEIRA results in high surface sensitivity by enhancing the signal of the adsorbed molecule by approximately two orders of magnitude and has the potential to enable new studies, from fundamental aspects to applied sciences. This report surveys studies of DNA and nucleic acid adsorption to gold surfaces, development of immunoassays, electron transfer between metal electrodes and proteins, and protein-protein interactions. Because signal enhancement in SEIRA uses surface properties of the nano-structured metal, the biomaterial must be tethered to the metal without hampering its functionality. Because many biochemical reactions proceed vectorially, their functionality depends on proper orientation of the biomaterial. Thus, surface-modification techniques are addressed that enable control of the proper orientation of proteins on the metal surface.
Stichworte
membrane; self-assembled monolayer; electron transfer; protein; FTIR
Erscheinungsjahr
2007
Zeitschriftentitel
ANALYTICAL AND BIOANALYTICAL CHEMISTRY
Band
388
Ausgabe
1
Seite(n)
47-54
ISSN
1618-2642
eISSN
1618-2650
Page URI
https://pub.uni-bielefeld.de/record/1594980

Zitieren

Ataka K, Heberle J. Biochemical applications of surface-enhanced infrared absorption spectroscopy. ANALYTICAL AND BIOANALYTICAL CHEMISTRY. 2007;388(1):47-54.
Ataka, K., & Heberle, J. (2007). Biochemical applications of surface-enhanced infrared absorption spectroscopy. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 388(1), 47-54. https://doi.org/10.1007/s00216-006-1071-4
Ataka, Kenichi, and Heberle, Joachim. 2007. “Biochemical applications of surface-enhanced infrared absorption spectroscopy”. ANALYTICAL AND BIOANALYTICAL CHEMISTRY 388 (1): 47-54.
Ataka, K., and Heberle, J. (2007). Biochemical applications of surface-enhanced infrared absorption spectroscopy. ANALYTICAL AND BIOANALYTICAL CHEMISTRY 388, 47-54.
Ataka, K., & Heberle, J., 2007. Biochemical applications of surface-enhanced infrared absorption spectroscopy. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 388(1), p 47-54.
K. Ataka and J. Heberle, “Biochemical applications of surface-enhanced infrared absorption spectroscopy”, ANALYTICAL AND BIOANALYTICAL CHEMISTRY, vol. 388, 2007, pp. 47-54.
Ataka, K., Heberle, J.: Biochemical applications of surface-enhanced infrared absorption spectroscopy. ANALYTICAL AND BIOANALYTICAL CHEMISTRY. 388, 47-54 (2007).
Ataka, Kenichi, and Heberle, Joachim. “Biochemical applications of surface-enhanced infrared absorption spectroscopy”. ANALYTICAL AND BIOANALYTICAL CHEMISTRY 388.1 (2007): 47-54.

57 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Nanoplasmonic Approaches for Sensitive Detection and Molecular Characterization of Extracellular Vesicles.
Rojalin T, Phong B, Koster HJ, Carney RP., Front Chem 7(), 2019
PMID: 31134179
The Controversial Orientation of Adenine on Gold and Silver.
Harroun SG., Chemphyschem 19(9), 2018
PMID: 29356330
Nanomaterial-Based Plasmon-Enhanced Infrared Spectroscopy.
Yang X, Sun Z, Low T, Hu H, Guo X, García de Abajo FJ, Avouris P, Dai Q., Adv Mater 30(20), 2018
PMID: 29572965
Polarization-Dependent Atomic Force Microscopy-Infrared Spectroscopy (AFM-IR): Infrared Nanopolarimetric Analysis of Structure and Anisotropy of Thin Films and Surfaces.
Hinrichs K, Shaykhutdinov T., Appl Spectrosc 72(6), 2018
PMID: 29652171
Resolving molecule-specific information in dynamic lipid membrane processes with multi-resonant infrared metasurfaces.
Rodrigo D, Tittl A, Ait-Bouziad N, John-Herpin A, Limaj O, Kelly C, Yoo D, Wittenberg NJ, Oh SH, Lashuel HA, Altug H., Nat Commun 9(1), 2018
PMID: 29867181
Ultrafast structural molecular dynamics investigated with 2D infrared spectroscopy methods.
Kraack JP., Top Curr Chem (Cham) 375(6), 2017
PMID: 29071445
Recent progress on colloidal metal nanoparticles as signal enhancers in nanosensing.
Abalde-Cela S, Carregal-Romero S, Coelho JP, Guerrero-Martínez A., Adv Colloid Interface Sci 233(), 2016
PMID: 26094082
Plasmonic nanostructures for surface enhanced spectroscopic methods.
Jahn M, Patze S, Hidi IJ, Knipper R, Radu AI, Mühlig A, Yüksel S, Peksa V, Weber K, Mayerhöfer T, Cialla-May D, Popp J., Analyst 141(3), 2016
PMID: 26759831
Mid-infrared spectroscopy for protein analysis: potential and challenges.
López-Lorente ÁI, Mizaikoff B., Anal Bioanal Chem 408(11), 2016
PMID: 26879650
Directional reflectance analysis for identifying counterfeit drugs: Preliminary study.
Wilczyński S, Koprowski R, Błońska-Fajfrowska B., J Pharm Biomed Anal 124(), 2016
PMID: 26977587
In-Situ Observation of Membrane Protein Folding during Cell-Free Expression.
Baumann A, Kerruth S, Fitter J, Büldt G, Heberle J, Schlesinger R, Ataka K., PLoS One 11(3), 2016
PMID: 26978519
Creation of a gold nanoparticle based electrochemical assay for the detection of inhibitors of bacterial cytochrome bd oxidases.
Fournier E, Nikolaev A, Nasiri HR, Hoeser J, Friedrich T, Hellwig P, Melin F., Bioelectrochemistry 111(), 2016
PMID: 27314676
Surface-enhanced infrared absorption studies towards a new optical biosensor.
Leidner L, Stäb J, Adam JT, Gauglitz G., Beilstein J Nanotechnol 7(), 2016
PMID: 28144523
Electroless reduction of silver chloride precipitates for the preparation of highly sensitive substrates for surface-enhanced infrared absorption (SEIRA) measurements.
Rao GP, Yang J., Appl Spectrosc 69(1), 2015
PMID: 25499246
Surface-enhanced spectroscopy on plasmonic oligomers assembled by AFM nanoxerography.
Moutet P, Sangeetha NM, Ressier L, Vilar-Vidal N, Comesaña-Hermo M, Ravaine S, Vallée RA, Gabudean AM, Astilean S, Farcau C., Nanoscale 7(5), 2015
PMID: 25553777
Real-time dynamic adsorption processes of cytochrome c on an electrode observed through electrochemical high-speed atomic force microscopy.
Takeda K, Uchihashi T, Watanabe H, Ishida T, Igarashi K, Nakamura N, Ohno H., PLoS One 10(2), 2015
PMID: 25671430
U-shaped fiber-optic ATR sensor enhanced by silver nanoparticles for continuous glucose monitoring.
Li D, Yu S, Sun C, Zou C, Yu H, Xu K., Biosens Bioelectron 72(), 2015
PMID: 26022782
Specific interactions between alkali metal cations and the KcsA channel studied using ATR-FTIR spectroscopy.
Furutani Y, Shimizu H, Asai Y, Oiki S, Kandori H., Biophys Physicobiol 12(), 2015
PMID: 27493853
Ultrasensitive detection and characterization of molecules with infrared plasmonic metamaterials.
Cheng F, Yang X, Gao J., Sci Rep 5(), 2015
PMID: 26388404
Investigation on the adsorption characteristics of sodium benzoate and taurine on gold nanoparticle film by ATR-FTIR spectroscopy.
Kumar N, Thomas S, Tokas RB, Kshirsagar RJ., Spectrochim Acta A Mol Biomol Spectrosc 118(), 2014
PMID: 24091347
Vibrational spectroscopy for probing molecular-level interactions in organic films mimicking biointerfaces.
Volpati D, Aoki PH, Alessio P, Pavinatto FJ, Miranda PB, Constantino CJ, Oliveira ON., Adv Colloid Interface Sci 207(), 2014
PMID: 24530000
SEIRA studies of uracil adsorbed on wet-chemically prepared gold nanoparticles film on glass substrate - effect of morphology of film.
Kumar N, Thomas S, Tokas RB, Kshirsagar RJ., Spectrochim Acta A Mol Biomol Spectrosc 129(), 2014
PMID: 24747861
Distance-determined sensitivity in attenuated total reflection-surface enhanced infrared absorption spectroscopy: aptamer-antigen compared to antibody-antigen.
Bao WJ, Yan ZD, Wang M, Zhao Y, Li J, Wang K, Xia XH, Wang ZL., Chem Commun (Camb) 50(58), 2014
PMID: 24901743
Immobilization of proteins in their physiological active state at functionalized thiol monolayers on ATR-germanium crystals.
Schartner J, Gavriljuk K, Nabers A, Weide P, Muhler M, Gerwert K, Kötting C., Chembiochem 15(17), 2014
PMID: 25256748
Direct Electrochemistry of Cytochrome bo Oxidase at a series of Gold Nanoparticles-Modified Electrodes.
Melin F, Meyer T, Lankiang S, Choi SK, Gennis RB, Blanck C, Schmutz M, Hellwig P., Electrochem commun 26(), 2013
PMID: 23335854
Gold nanoparticle capping layers: structure, dynamics, and surface enhancement measured using 2D-IR spectroscopy.
Donaldson PM, Hamm P., Angew Chem Int Ed Engl 52(2), 2013
PMID: 23184759
In-situ ultra-sensitive infrared absorption spectroscopy of biomolecule interactions in real time with plasmonic nanoantennas.
Adato R, Altug H., Nat Commun 4(), 2013
PMID: 23877168
A novel Au-Pt@PPy(polypyrrole) coral-like structure: facile synthesis, high SERS effect, and good electro catalytic activity.
Wang W, Gao Y, Jia X, Xi K., J Colloid Interface Sci 396(), 2013
PMID: 23403116
Conformational changes of enzymes upon immobilisation.
Secundo F., Chem Soc Rev 42(15), 2013
PMID: 23482973
Recent applications of ATR FTIR spectroscopy and imaging to proteins.
Glassford SE, Byrne B, Kazarian SG., Biochim Biophys Acta 1834(12), 2013
PMID: 23928299
Dependence of the direct electron transfer activity and adsorption kinetics of cytochrome c on interfacial charge properties.
Wang GX, Wang M, Wu ZQ, Bao WJ, Zhou Y, Xia XH., Analyst 138(19), 2013
PMID: 23912152
Surface-enhanced molecular spectroscopy (SEMS) based on perfect-absorber metamaterials in the mid-infrared.
Li Y, Su L, Shou C, Yu C, Deng J, Fang Y., Sci Rep 3(), 2013
PMID: 24091778
In situ monitoring of the DNA hybridization by attenuated total reflection surface-enhanced infrared absorption spectroscopy.
Xu JY, Jin B, Zhao Y, Wang K, Xia XH., Chem Commun (Camb) 48(25), 2012
PMID: 22246240
Noble metal nanoparticles for biosensing applications.
Doria G, Conde J, Veigas B, Giestas L, Almeida C, Assunção M, Rosa J, Baptista PV., Sensors (Basel) 12(2), 2012
PMID: 22438731
Direct observation of phenylalanine orientations in statherin bound to hydroxyapatite surfaces.
Weidner T, Dubey M, Breen NF, Ash J, Baio JE, Jaye C, Fischer DA, Drobny GP, Castner DG., J Am Chem Soc 134(21), 2012
PMID: 22563672
Incidence angle dependence of the enhancement factor in attenuated total reflection surface enhanced infrared absorption spectroscopy studied by numerical solution of the vectorial Maxwell equations.
Vasan G, Erbe A., Phys Chem Chem Phys 14(42), 2012
PMID: 23032717
Application of thin-film interference coatings in infrared reflection spectroscopy of organic samples in contact with thin metal films.
Reithmeier M, Erbe A., Appl Opt 50(9), 2011
PMID: 21460955
Methyl groups at dielectric and metal surfaces studied by sum-frequency generation in co- and counter-propagating configurations.
Jena KC, Hung KK, Schwantje TR, Hore DK., J Chem Phys 135(4), 2011
PMID: 21806152
Surface enhanced optical spectroscopies for bioanalysis.
Larmour IA, Graham D., Analyst 136(19), 2011
PMID: 21779583
Scanning near-field IR microscopy of proteins in lipid bilayers.
Ballout F, Krassen H, Kopf I, Ataka K, Bründermann E, Heberle J, Havenith M., Phys Chem Chem Phys 13(48), 2011
PMID: 22048276
Intermediates in the catalytic cycle of [NiFe] hydrogenase: functional spectroscopy of the active site.
Pandelia ME, Ogata H, Lubitz W., Chemphyschem 11(6), 2010
PMID: 20301175
Thinner, smaller, faster: IR techniques to probe the functionality of biological and biomimetic systems.
Ataka K, Kottke T, Heberle J., Angew Chem Int Ed Engl 49(32), 2010
PMID: 20818765
SEIRA spectroscopy on a membrane receptor monolayer using lipoprotein particles as carriers.
Zaitseva E, Saavedra M, Banerjee S, Sakmar TP, Vogel R., Biophys J 99(7), 2010
PMID: 20923668
Chemical reduction method for preparation of silver nanoparticles on a silver chloride substrate for application in surface-enhanced infrared optical sensors.
Rao GP, Yang J., Appl Spectrosc 64(10), 2010
PMID: 20925978
Dielectric interlayers for increasing the transparency of metal films for mid-infrared attenuated total reflection spectroscopy.
Reithmeier M, Erbe A., Phys Chem Chem Phys 12(44), 2010
PMID: 20941445
Monitoring catalysis of the membrane-bound hydrogenase from Ralstonia eutropha H16 by surface-enhanced IR absorption spectroscopy.
Wisitruangsakul N, Lenz O, Ludwig M, Friedrich B, Lendzian F, Hildebrandt P, Zebger I., Angew Chem Int Ed Engl 48(3), 2009
PMID: 19067445
A two-layer gold surface with improved surface enhancement for spectro-electrochemistry using surface-enhanced infrared absorption spectroscopy.
Nowak C, Luening C, Knoll W, Naumann RL., Appl Spectrosc 63(9), 2009
PMID: 19796491
How algae produce hydrogen--news from the photosynthetic hydrogenase.
Stripp ST, Happe T., Dalton Trans (45), 2009
PMID: 19904421
Ultra-sensitive vibrational spectroscopy of protein monolayers with plasmonic nanoantenna arrays.
Adato R, Yanik AA, Amsden JJ, Kaplan DL, Omenetto FG, Hong MK, Erramilli S, Altug H., Proc Natl Acad Sci U S A 106(46), 2009
PMID: 19880744
Self-assembly approaches to nanomaterial encapsulation in viral protein cages.
Aniagyei SE, Dufort C, Kao CC, Dragnea B., J Mater Chem 18(32), 2008
PMID: 19809586
Fourier transform infrared spectroscopy as a tool to study structural properties of cytochromes P450 (CYPs).
Jung C., Anal Bioanal Chem 392(6), 2008
PMID: 18581103
Redox-linked protein dynamics of cytochrome c probed by time-resolved surface enhanced infrared absorption spectroscopy.
Wisitruangsakul N, Zebger I, Ly KH, Murgida DH, Ekgasit S, Hildebrandt P., Phys Chem Chem Phys 10(34), 2008
PMID: 18728870
Molecular beacon-metal nanowire interface: effect of probe sequence and surface coverage on sensor performance.
Cederquist KB, Stoermer Golightly R, Keating CD., Langmuir 24(16), 2008
PMID: 18624416
Thermoresponsive polymeric gel as a medium for examining interactions between dsDNA and an anticancer drug.
Kowalczyk A, Nowicka AM, Karbarz M, Stojek Z., Anal Bioanal Chem 392(3), 2008
PMID: 18716762
Resolving voltage-dependent structural changes of a membrane photoreceptor by surface-enhanced IR difference spectroscopy.
Jiang X, Zaitseva E, Schmidt M, Siebert F, Engelhard M, Schlesinger R, Ataka K, Vogel R, Heberle J., Proc Natl Acad Sci U S A 105(34), 2008
PMID: 18719097
In situ monitoring of the orientated assembly of strep-tagged membrane proteins on the gold surface by surface enhanced infrared absorption spectroscopy.
Jiang X, Zuber A, Heberle J, Ataka K., Phys Chem Chem Phys 10(42), 2008
PMID: 18972026
Recent advances in nanomaterial plasmonics: fundamental studies and applications.
Love SA, Marquis BJ, Haynes CL., Appl Spectrosc 62(12), 2008
PMID: 19094385

38 References

Daten bereitgestellt von Europe PubMed Central.


Fleischm M, Hendra PJ, McQuilla AJ., 1974

Jeanmaire DL, Vanduyne RP., 1977

Hartstein A, Kirtley JR, Tsang JC., 1980
Surface-enhanced infrared spectroscopy.
Aroca RF, Ross DJ, Domingo C., Appl Spectrosc 58(11), 2004
PMID: 15606928

Osawa M., 1997

Osawa M., 2001
Integration of Layered Redox Proteins and Conductive Supports for Bioelectronic Applications.
Willner I I, Katz E., Angew. Chem. Int. Ed. Engl. 39(7), 2000
PMID: 10767010
Functional waters in intraprotein proton transfer monitored by FTIR difference spectroscopy.
Garczarek F, Gerwert K., Nature 439(7072), 2005
PMID: 16280982
Vibrational modes of ubiquinone in cytochrome bo(3) from Escherichia coli identified by Fourier transform infrared difference spectroscopy and specific (13)C labeling.
Hellwig P, Mogi T, Tomson FL, Gennis RB, Iwata J, Miyoshi H, Mantele W., Biochemistry 38(44), 1999
PMID: 10545194
Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.
Rodig C, Chizhov I, Weidlich O, Siebert F., Biophys. J. 76(5), 1999
PMID: 10233083

Nishikawa Y, Nagasawa T, Fujiwara K, Osawa M., 1993

Haynes CL, McFarland AD, Smith MT, Hulteen JC, Duyne RP., 2002

Haynes CL, McFarland AD, Duyne RP, Godwin HA., 2005
Functional vibrational spectroscopy of a cytochrome c monolayer: SEIDAS probes the interaction with different surface-modified electrodes.
Ataka K, Heberle J., J. Am. Chem. Soc. 126(30), 2004
PMID: 15281838
In-situ infrared study of the adsorption and oxidation of oxalic acid at single-crystal and thin-film gold electrodes: a combined external reflection infrared and ATR-SEIRAS approach.
Berna A, Delgado JM, Orts JM, Rodes A, Feliu JM., Langmuir 22(17), 2006
PMID: 16893215

Miyake H, Ye S, Osawa M., 2002

Rodes A, Orts JM, Perez JM, Feliu JM, Aldaz A., 2003
Spectroimmunochemistry using colloidal gold bioconjugates.
Kamnev AA, Dykman LA, Tarantilis PA, Polissiou MG., Biosci. Rep. 22(5-6), 2002
PMID: 12635851
Colloidal gold filtrates as metal substrates for surface-enhanced infrared absorption spectroscopy.
Seelenbinder JA, Brown CW, Pivarnik P, Rand AG., Anal. Chem. 71(10), 1999
PMID: 10361496

Osawa M, Ataka K, Yoshii K, Nishikawa Y., 1993

Nishikawa Y, Fujiwara K, Ataka K, Osawa M., 1993

Nishikawa Y, Fujiwara K, Osawa M, Takamura K., 1993
Redox-linked conformational changes in proteins detected by a combination of infrared spectroscopy and protein electrochemistry. Evaluation of the technique with cytochrome c.
Moss D, Nabedryk E, Breton J, Mantele W., Eur. J. Biochem. 187(3), 1990
PMID: 2154376
Oriented attachment and membrane reconstitution of His-tagged cytochrome c oxidase to a gold electrode: in situ monitoring by surface-enhanced infrared absorption spectroscopy.
Ataka K, Giess F, Knoll W, Naumann R, Haber-Pohlmeier S, Richter B, Heberle J., J. Am. Chem. Soc. 126(49), 2004
PMID: 15584756
Orientational control of the physiological reaction of cytochrome c oxidase tethered to a gold electrode.
Ataka K, Richter B, Heberle J., J Phys Chem B 110(18), 2006
PMID: 16671753

Aroca R, Bujalski R., 1999

Ataka K, Osawa M., 1998

Pronkin S, Wandlowski T., 2003
In situ surface-enhanced infrared study of hydrogen bond pairing of complementary nucleic acid bases at the electrochemical interface.
Sato Y, Noda H, Mizutani F, Yamakata A, Osawa M., Anal. Chem. 76(18), 2004
PMID: 15362922
The SEIRA spectroscopy data of nucleic acids and phospholipids from sensitive- and drug-resistant rat tumours.
Chekhun VF, Solyanik GI, Kulik GI, Tryndiak VP, Todor IN, Dovbeshko GI, Repnytska OP., J. Exp. Clin. Cancer Res. 21(4), 2002
PMID: 12636108
Surface enhanced IR absorption of nucleic acids from tumor cells: FTIR reflectance study.
Dovbeshko GI, Chegel VI, Gridina NY, Repnytska OP, Shirshov YM, Tryndiak VP, Todor IM, Solyanik GI., Biopolymers 67(6), 2002
PMID: 12209454
Immunoassays based on surface-enhanced infrared absorption spectroscopy.
Brown CW, Li Y, Seelenbinder JA, Pivarnik P, Rand AG, Letcher SV, Gregory OJ, Platek MJ., Anal. Chem. 70(14), 1998
PMID: 9684546

Fedurco M., 2000
Scanning probe microscopic studies of the oriented attachment and membrane reconstitution of cytochrome C oxidase to a gold electrode.
Mayer D, Ataka K, Heberle J, Offenhausser A., Langmuir 21(19), 2005
PMID: 16142929

AUTHOR UNKNOWN, 0
Long distance electron transfer in cytochrome c oxidase immobilised on electrodes. A surface enhanced resonance Raman spectroscopic study.
Hrabakova J, Ataka K, Heberle J, Hildebrandt P, Murgida DH., Phys Chem Chem Phys 8(6), 2005
PMID: 16482317
Definition of the interaction domain for cytochrome c on cytochrome c oxidase. I. Biochemical, spectral, and kinetic characterization of surface mutants in subunit ii of Rhodobacter sphaeroides cytochrome aa(3).
Zhen Y, Hoganson CW, Babcock GT, Ferguson-Miller S., J. Biol. Chem. 274(53), 1999
PMID: 10608872

AUTHOR UNKNOWN, 0
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 17242890
PubMed | Europe PMC

Suchen in

Google Scholar