The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum

Brinkrolf K, Brune I, Tauch A (2007)
In: Journal of Biotechnology. JOURNAL OF BIOTECHNOLOGY, 129(2). ELSEVIER SCIENCE BV: 191-211.

Konferenzbeitrag | Veröffentlicht | Englisch
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
network; network motif; regulatory; transcriptional regulator; topological design; Corynebacterium glutamicum; systems biology
Titel des Konferenzbandes
Journal of Biotechnology
Page URI


Brinkrolf K, Brune I, Tauch A. The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum. In: Journal of Biotechnology. JOURNAL OF BIOTECHNOLOGY. Vol 129. ELSEVIER SCIENCE BV; 2007: 191-211.
Brinkrolf, K., Brune, I., & Tauch, A. (2007). The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum. Journal of Biotechnology, JOURNAL OF BIOTECHNOLOGY, 129, 191-211. ELSEVIER SCIENCE BV.
Brinkrolf, K., Brune, I., and Tauch, A. (2007). “The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum” in Journal of Biotechnology JOURNAL OF BIOTECHNOLOGY, vol. 129, (ELSEVIER SCIENCE BV), 191-211.
Brinkrolf, K., Brune, I., & Tauch, A., 2007. The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum. In Journal of Biotechnology. JOURNAL OF BIOTECHNOLOGY. no.129 ELSEVIER SCIENCE BV, pp. 191-211.
K. Brinkrolf, I. Brune, and A. Tauch, “The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum”, Journal of Biotechnology, JOURNAL OF BIOTECHNOLOGY, vol. 129, ELSEVIER SCIENCE BV, 2007, pp.191-211.
Brinkrolf, K., Brune, I., Tauch, A.: The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum. Journal of Biotechnology. JOURNAL OF BIOTECHNOLOGY. 129, p. 191-211. ELSEVIER SCIENCE BV (2007).
Brinkrolf, Karina, Brune, Iris, and Tauch, Andreas. “The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum”. Journal of Biotechnology. ELSEVIER SCIENCE BV, 2007.Vol. 129. JOURNAL OF BIOTECHNOLOGY. 191-211.

38 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Comparative analysis of the Corynebacterium glutamicum transcriptome in response to changes in dissolved oxygen levels.
Liu X, Yang S, Wang F, Dai X, Yang Y, Bai Z., J Ind Microbiol Biotechnol 44(2), 2017
PMID: 27844170
Genome-Enabled Insights into the Ecophysiology of the Comammox Bacterium "Candidatus Nitrospira nitrosa".
Camejo PY, Santo Domingo J, McMahon KD, Noguera DR., mSystems 2(5), 2017
PMID: 28905001
Regulons of global transcription factors in Corynebacterium glutamicum.
Toyoda K, Inui M., Appl Microbiol Biotechnol 100(1), 2016
PMID: 26496920
Chassis organism from Corynebacterium glutamicum--a top-down approach to identify and delete irrelevant gene clusters.
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, Krämer R, Seibold G, Frunzke J, Kalinowski J, Rückert C, Wendisch VF, Noack S., Biotechnol J 10(2), 2015
PMID: 25139579
Isolation of fully synthetic promoters for high-level gene expression in Corynebacterium glutamicum.
Yim SS, An SJ, Kang M, Lee J, Jeong KJ., Biotechnol Bioeng 110(11), 2013
PMID: 23633298
Comprehensive discovery and characterization of small RNAs in Corynebacterium glutamicum ATCC 13032.
Mentz A, Neshat A, Pfeifer-Sancar K, Pühler A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24138339
Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique.
Pfeifer-Sancar K, Mentz A, Rückert C, Kalinowski J., BMC Genomics 14(), 2013
PMID: 24341750
Interaction of transcriptional repressor ArgR with transcriptional regulator FarR at the argB promoter region in Corynebacterium glutamicum.
Lee SY, Park JM, Lee JH, Chang ST, Park JS, Kim YH, Min J., Appl Environ Microbiol 77(3), 2011
PMID: 21115700
Characterization of an adenylate cyclase gene (cyaB) deletion mutant of Corynebacterium glutamicum ATCC 13032.
Cha PH, Park SY, Moon MW, Subhadra B, Oh TK, Kim E, Kim JF, Lee JK., Appl Microbiol Biotechnol 85(4), 2010
PMID: 19568747
The Zur regulon of Corynebacterium glutamicum ATCC 13032.
Schröder J, Jochmann N, Rodionov DA, Tauch A., BMC Genomics 11(), 2010
PMID: 20055984
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence.
Trost E, Ott L, Schneider J, Schröder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786
A 2D reversed-phase x ion-pair reversed-phase HPLC-MALDI TOF/TOF-MS approach for shotgun proteome analysis.
Lasaosa M, Delmotte N, Huber CG, Melchior K, Heinzle E, Tholey A., Anal Bioanal Chem 393(4), 2009
PMID: 19066860
The serine hydroxymethyltransferase gene glyA in Corynebacterium glutamicum is controlled by GlyR.
Schweitzer JE, Stolz M, Diesveld R, Etterich H, Eggeling L., J Biotechnol 139(3), 2009
PMID: 19124047
Microarray studies reveal a 'differential response' to moderate or severe heat shock of the HrcA- and HspR-dependent systems in Corynebacterium glutamicum.
Barreiro C, Nakunst D, Hüser AT, de Paz HD, Kalinowski J, Martín JF., Microbiology 155(pt 2), 2009
PMID: 19202085
EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data.
Dondrup M, Albaum SP, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Küster H, Linke B, Mertens D, Mittard-Runte V, Neuweger H, Runte KJ, Tauch A, Tille F, Pühler A, Goesmann A., BMC Bioinformatics 10(), 2009
PMID: 19200358
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays.
Jochmann N, Kurze AK, Czaja LF, Brinkrolf K, Brune I, Hüser AT, Hansmeier N, Pühler A, Borovok I, Tauch A., Microbiology 155(pt 5), 2009
PMID: 19372162
A game with many players: control of gdh transcription in Corynebacterium glutamicum.
Hänssler E, Müller T, Palumbo K, Patek M, Brocker M, Krämer R, Burkovski A., J Biotechnol 142(2), 2009
PMID: 19394370
Role of the transcriptional regulator RamB (Rv0465c) in the control of the glyoxylate cycle in Mycobacterium tuberculosis.
Micklinghoff JC, Breitinger KJ, Schmidt M, Geffers R, Eikmanns BJ, Bange FC., J Bacteriol 191(23), 2009
PMID: 19767422
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Götker S, Kalinowski J, Kamp PB, Lobo FP, Viehoever P, Weisshaar B, Soriano F, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18367281
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehoever P, Gartemann KH, Arnold W, Blom J, Brinkrolf K, Brune I, Götker S, Weisshaar B, Goesmann A, Dröge M, Pühler A., J Biotechnol 136(1-2), 2008
PMID: 18430482
The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences.
Brinkrolf K, Plöger S, Solle S, Brune I, Nentwich SS, Hüser AT, Kalinowski J, Pühler A, Tauch A., Microbiology 154(pt 4), 2008
PMID: 18375800

115 References

Daten bereitgestellt von Europe PubMed Central.

Systems biology: its practice and challenges.
Aderem A., Cell 121(4), 2005
PMID: 15907465
WhiA, a protein of unknown function conserved among gram-positive bacteria, is essential for sporulation in Streptomyces coelicolor A3(2).
Ainsa JA, Ryding NJ, Hartley N, Findlay KC, Bruton CJ, Chater KF., J. Bacteriol. 182(19), 2000
PMID: 10986251
The many faces of the helix-turn-helix domain: transcription regulation and beyond.
Aravind L, Anantharaman V, Balaji S, Babu MM, Iyer LM., FEMS Microbiol. Rev. 29(2), 2005
PMID: 15808743
Transcriptional analysis of the F0F1 ATPase operon of Corynebacterium glutamicum ATCC 13032 reveals strong induction by alkaline pH.
Barriuso-Iglesias M, Barreiro C, Flechoso F, Martin JF., Microbiology (Reading, Engl.) 152(Pt 1), 2006
PMID: 16385111
CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A., BMC Genomics 7(), 2006
PMID: 16478536
CoryneRegNet 2: an integrative bioinformatics approach for reconstruction and comparison of transcriptional regulatory networks in prokaryotes
Baumbach, J. Integr. Bioinf. 3(), 2006
Expression control and specificity of the basic amino acid exporter LysE of Corynebacterium glutamicum.
Bellmann A, Vrljic M, Patek M, Sahm H, Kramer R, Eggeling L., Microbiology (Reading, Engl.) 147(Pt 7), 2001
PMID: 11429454
Making informed decisions: regulatory interactions between two-component systems.
Bijlsma JJ, Groisman EA., Trends Microbiol. 11(8), 2003
PMID: 12915093
Alternative oxygen-dependent and oxygen-independent ribonucleotide reductases in Streptomyces: cross-regulation and physiological role in response to oxygen limitation.
Borovok I, Gorovitz B, Yanku M, Schreiber R, Gust B, Chater K, Aharonowitz Y, Cohen G., Mol. Microbiol. 54(4), 2004
PMID: 15522084
Rv2358 and FurB: two transcriptional regulators from Mycobacterium tuberculosis which respond to zinc.
Canneva F, Branzoni M, Riccardi G, Provvedi R, Milano A., J. Bacteriol. 187(16), 2005
PMID: 16077132
Transcription regulation and environmental adaptation in bacteria.
Cases I, de Lorenzo V, Ouzounis CA., Trends Microbiol. 11(6), 2003
PMID: 12823939
The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129.
Cerdeno-Tarraga AM, Efstratiou A, Dover LG, Holden MT, Pallen M, Bentley SD, Besra GS, Churcher C, James KD, De Zoysa A, Chillingworth T, Cronin A, Dowd L, Feltwell T, Hamlin N, Holroyd S, Jagels K, Moule S, Quail MA, Rabbinowitsch E, Rutherford KM, Thomson NR, Unwin L, Whitehead S, Barrell BG, Parkhill J., Nucleic Acids Res. 31(22), 2003
PMID: 14602910
Quantitative Petri net model of gene regulated metabolic networks in the cell.
Chen M, Hofestadt R., In Silico Biol. (Gedrukt) 3(3), 2003
PMID: 12954095
Molecular analysis of pyrH gene encoding UMP kinase in Corynebacterium glutamicum
Chung, 2006
Is prokaryotic complexity limited by accelerated growth in regulatory overhead?
Croft, Genome Biol. 5(), 2003
Aggregation of topological motifs in the Escherichia coli transcriptional regulatory network.
Dobrin R, Beg QK, Barabasi AL, Oltvai ZN., BMC Bioinformatics 5(), 2004
PMID: 15018656
The transcriptional activator ClgR controls transcription of genes involved in proteolysis and DNA repair in Corynebacterium glutamicum.
Engels S, Ludwig C, Schweitzer JE, Mack C, Bott M, Schaffer S., Mol. Microbiol. 57(2), 2005
PMID: 15978086
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups.
Gao B, Paramanathan R, Gupta RS., Antonie Van Leeuwenhoek 90(1), 2006
PMID: 16670965
RamB, a novel transcriptional regulator of genes involved in acetate metabolism of Corynebacterium glutamicum.
Gerstmeir R, Cramer A, Dangel P, Schaffer S, Eikmanns BJ., J. Bacteriol. 186(9), 2004
PMID: 15090522
A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes.
Goldberg SM, Johnson J, Busam D, Feldblyum T, Ferriera S, Friedman R, Halpern A, Khouri H, Kravitz SA, Lauro FM, Li K, Rogers YH, Strausberg R, Sutton G, Tallon L, Thomas T, Venter E, Frazier M, Venter JC., Proc. Natl. Acad. Sci. U.S.A. 103(30), 2006
PMID: 16840556
whmD is an essential mycobacterial gene required for proper septation and cell division.
Gomez JE, Bishai WR., Proc. Natl. Acad. Sci. U.S.A. 97(15), 2000
PMID: 10880571
The ClpB ATPase of Streptomyces albus G belongs to the HspR heat shock regulon.
Grandvalet C, de Crecy-Lagard V, Mazodier P., Mol. Microbiol. 31(2), 1999
PMID: 10027969
Transcriptional and post-transcriptional control of cold-shock genes.
Gualerzi CO, Giuliodori AM, Pon CL., J. Mol. Biol. 331(3), 2003
PMID: 12899826
Cloning and transcriptional characterization of two sigma factor genes, sigA and sigB, from Brevibacterium flavum.
Halgasova N, Bukovska G, Timko J, Kormanec J., Curr. Microbiol. 43(4), 2001
PMID: 11683358
The Brevibacterium flavum sigma factor SigB has a role in the environmental stress response.
Halgasova N, Bukovska G, Ugorcakova J, Timko J, Kormanec J., FEMS Microbiol. Lett. 216(1), 2002
PMID: 12423756
The surface (S)-layer gene cspB of Corynebacterium glutamicum is transcriptionally activated by a LuxR-type regulator and located on a 6 kb genomic island absent from the type strain ATCC 13032.
Hansmeier N, Albersmeier A, Tauch A, Damberg T, Ros R, Anselmetti D, Puhler A, Kalinowski J., Microbiology (Reading, Engl.) 152(Pt 4), 2006
PMID: 16549657
Industrial production of amino acids by coryneform bacteria.
Hermann T., J. Biotechnol. 104(1-3), 2003
PMID: 12948636
Reconstruction of microbial transcriptional regulatory networks.
Herrgard MJ, Covert MW, Palsson BO., Curr. Opin. Biotechnol. 15(1), 2004
PMID: 15102470
Genetic characterization of the resorcinol catabolic pathway in Corynebacterium glutamicum.
Huang Y, Zhao KX, Shen XH, Chaudhry MT, Jiang CY, Liu SJ., Appl. Environ. Microbiol. 72(11), 2006
PMID: 16963551
The phosphate starvation stimulon of Corynebacterium glutamicum determined by DNA microarray analyses.
Ishige T, Krause M, Bott M, Wendisch VF, Sahm H., J. Bacteriol. 185(15), 2003
PMID: 12867461
Functional modulation of Escherichia coli RNA polymerase.
Ishihama A., Annu. Rev. Microbiol. 54(), 2000
PMID: 11018136
Developmental control of a parAB promoter leads to formation of sporulation-associated ParB complexes in Streptomyces coelicolor.
Jakimowicz D, Mouz S, Zakrzewska-Czerwinska J, Chater KF., J. Bacteriol. 188(5), 2006
PMID: 16484182
Conservation of DNA curvature signals in regulatory regions of prokaryotic genes.
Jauregui R, Abreu-Goodger C, Moreno-Hagelsieb G, Collado-Vides J, Merino E., Nucleic Acids Res. 31(23), 2003
PMID: 14627810
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948626
Export of L-isoleucine from Corynebacterium glutamicum: a two-gene-encoded member of a new translocator family.
Kennerknecht N, Sahm H, Yen MR, Patek M, Saier Jr MH Jr, Eggeling L., J. Bacteriol. 184(14), 2002
PMID: 12081967
Functional analysis of sigH expression in Corynebacterium glutamicum.
Kim TH, Kim HJ, Park JS, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 331(4), 2005
PMID: 15883048
The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress.
Kim TH, Park JS, Kim HJ, Kim Y, Kim P, Lee HS., Biochem. Biophys. Res. Commun. 337(3), 2005
PMID: 16212936
Organization and regulation of arginine biosynthesis genes in Corynebacterium glutamicum
Kim, 2006
Two-component systems of Corynebacterium glutamicum: deletion analysis and involvement of the PhoS-PhoR system in the phosphate starvation response.
Kocan M, Schaffer S, Ishige T, Sorger-Herrmann U, Wendisch VF, Bott M., J. Bacteriol. 188(2), 2006
PMID: 16385062
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate.
Koch DJ, Ruckert C, Albersmeier A, Huser AT, Tauch A, Puhler A, Kalinowski J., Mol. Microbiol. 58(2), 2005
PMID: 16194234
Trends between gene content and genome size in prokaryotic species with larger genomes.
Konstantinidis KT, Tiedje JM., Proc. Natl. Acad. Sci. U.S.A. 101(9), 2004
PMID: 14973198
Characterization and use of catabolite-repressed promoters from gluconate genes in Corynebacterium glutamicum.
Letek M, Valbuena N, Ramos A, Ordonez E, Gil JA, Mateos LM., J. Bacteriol. 188(2), 2006
PMID: 16385030
Biotechnological production of amino acids and derivatives: current status and prospects.
Leuchtenberger W, Huthmacher K, Drauz K., Appl. Microbiol. Biotechnol. 69(1), 2005
PMID: 16195792
Bacterial regulatory networks are extremely flexible in evolution.
Lozada-Chavez I, Janga SC, Collado-Vides J., Nucleic Acids Res. 34(12), 2006
PMID: 16840530
Microarrays for microbiologists.
Lucchini S, Thompson A, Hinton JC., Microbiology (Reading, Engl.) 147(Pt 6), 2001
PMID: 11390672
An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs.
Ma HW, Kumar B, Ditges U, Gunzer F, Buer J, Zeng AP., Nucleic Acids Res. 32(22), 2004
PMID: 15604458
Evolution of transcription factors and the gene regulatory network in Escherichia coli.
Madan Babu M, Teichmann SA., Nucleic Acids Res. 31(4), 2003
PMID: 12582243
Structure and function of the feed-forward loop network motif.
Mangan S, Alon U., Proc. Natl. Acad. Sci. U.S.A. 100(21), 2003
PMID: 14530388
CDD: a Conserved Domain Database for protein classification.
Marchler-Bauer A, Anderson JB, Cherukuri PF, DeWeese-Scott C, Geer LY, Gwadz M, He S, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Liebert CA, Liu C, Lu F, Marchler GH, Mullokandov M, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Yamashita RA, Yin JJ, Zhang D, Bryant SH., Nucleic Acids Res. 33(Database issue), 2005
PMID: 15608175
Genome sequencing in microfabricated high-density picolitre reactors.
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Ho CH, Irzyk GP, Jando SC, Alenquer ML, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, Lohman KL, Lu H, Makhijani VB, McDade KE, McKenna MP, Myers EW, Nickerson E, Nobile JR, Plant R, Puc BP, Ronan MT, Roth GT, Sarkis GJ, Simons JF, Simpson JW, Srinivasan M, Tartaro KR, Tomasz A, Vogt KA, Volkmer GA, Wang SH, Wang Y, Weiner MP, Yu P, Begley RF, Rothberg JM., Nature 437(7057), 2005
PMID: 16056220
Identifying global regulators in transcriptional regulatory networks in bacteria.
Martinez-Antonio A, Collado-Vides J., Curr. Opin. Microbiol. 6(5), 2003
PMID: 14572541
Internal-sensing machinery directs the activity of the regulatory network in Escherichia coli.
Martinez-Antonio A, Janga SC, Salgado H, Collado-Vides J., Trends Microbiol. 14(1), 2005
PMID: 16311037
Genome-based analysis of biosynthetic aminotransferase genes of Corynebacterium glutamicum.
McHardy AC, Tauch A, Ruckert C, Puhler A, Kalinowski J., J. Biotechnol. 104(1-3), 2003
PMID: 12948641
Vanillate metabolism in Corynebacterium glutamicum.
Merkens H, Beckers G, Wirtz A, Burkovski A., Curr. Microbiol. 51(1), 2005
PMID: 15971090
The Mycobacterium tuberculosis Rv2358-furB operon is induced by zinc.
Milano A, Branzoni M, Canneva F, Profumo A, Riccardi G., Res. Microbiol. 155(3), 2004
PMID: 15059632
Analyses of enzyme II gene mutants for sugar transport and heterologous expression of fructokinase gene in Corynebacterium glutamicum ATCC 13032.
Moon MW, Kim HJ, Oh TK, Shin CS, Lee JS, Kim SJ, Lee JK., FEMS Microbiol. Lett. 244(2), 2005
PMID: 15766777
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.
Nishio Y, Nakamura Y, Kawarabayasi Y, Usuda Y, Kimura E, Sugimoto S, Matsui K, Yamagishi A, Kikuchi H, Ikeo K, Gojobori T., Genome Res. 13(7), 2003
PMID: 12840036
Multiple sigma factor genes in Brevibacterium lactofermentum: characterization of sigA and sigB.
Oguiza JA, Marcos AT, Malumbres M, Martin JF., J. Bacteriol. 178(2), 1996
PMID: 8550480
Transcriptional analysis of the sigA and sigB genes of Brevibacterium lactofermentum.
Oguiza JA, Marcos AT, Martin JF., FEMS Microbiol. Lett. 153(1), 1997
PMID: 9252580
Analysis of genes involved in arsenic resistance in Corynebacterium glutamicum ATCC 13032.
Ordonez E, Letek M, Valbuena N, Gil JA, Mateos LM., Appl. Environ. Microbiol. 71(10), 2005
PMID: 16204540
Transcription factors: structural families and principles of DNA recognition.
Pabo CO, Sauer RT., Annu. Rev. Biochem. 61(), 1992
PMID: 1497306
Promoters of Corynebacterium glutamicum.
Patek M, Nesvera J, Guyonvarch A, Reyes O, Leblon G., J. Biotechnol. 104(1-3), 2003
PMID: 12948648
Promoters responsive to DNA bending: a common theme in prokaryotic gene expression.
Perez-Martin J, Rojo F, de Lorenzo V., Microbiol. Rev. 58(2), 1994
PMID: 8078436
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12.
Perez-Rueda E, Collado-Vides J., Nucleic Acids Res. 28(8), 2000
PMID: 10734204
Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea.
Perez-Rueda E, Collado-Vides J, Segovia L., Comput Biol Chem 28(5-6), 2004
PMID: 15556475
Cold-shock response and cold-shock proteins.
Phadtare S, Alsina J, Inouye M., Curr. Opin. Microbiol. 2(2), 1999
PMID: 10322168
Evolution of protein superfamilies and bacterial genome size.
Ranea JA, Buchan DW, Thornton JM, Orengo CA., J. Mol. Biol. 336(4), 2004
PMID: 15095866
Modular analysis of the transcriptional regulatory network of E. coli.
Resendis-Antonio O, Freyre-Gonzalez JA, Menchaca-Mendez R, Gutierrez-Rios RM, Martinez-Antonio A, Avila-Sanchez C, Collado-Vides J., Trends Genet. 21(1), 2005
PMID: 15680508
Reconstructing biological networks using conditional correlation analysis.
Rice JJ, Tu Y, Stolovitzky G., Bioinformatics 21(6), 2004
PMID: 15486043

Genomic analysis and identification of catabolic pathways for aromatic compounds in Corynebacterium glutamicum
Shen, Microbes Environ. 20(), 2005
Functional identification of novel genes involved in the glutathione-independent gentisate pathway in Corynebacterium glutamicum.
Shen XH, Jiang CY, Huang Y, Liu ZP, Liu SJ., Appl. Environ. Microbiol. 71(7), 2005
PMID: 16000747
Network motifs in the transcriptional regulation network of Escherichia coli.
Shen-Orr SS, Milo R, Mangan S, Alon U., Nat. Genet. 31(1), 2002
PMID: 11967538
Two-component signal transduction.
Stock AM, Robinson VL, Goudreau PN., Annu. Rev. Biochem. 69(), 2000
PMID: 10966457
Mining genome databases to identify and understand new gene regulatory systems.
Stormo GD, Tan K., Curr. Opin. Microbiol. 5(2), 2002
PMID: 11934610
Regulation of the Bacillus subtilis pyrimidine biosynthetic operon by transcriptional attenuation: control of gene expression by an mRNA-binding protein
Switzer, Prog. Nucl. Acid Res. Mol. Biol. 62(), 1999
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, Meyer F, Rupp O, Schneiker S, Viehoever P, Puhler A., J. Bacteriol. 187(13), 2005
PMID: 15968079
Ultrafast de novo sequencing of Corynebacterium urealyticum using the Genome Sequencer 20 System
Tauch, Biochemica 4(), 2006
Gene regulatory network growth by duplication.
Teichmann SA, Babu MM., Nat. Genet. 36(5), 2004
PMID: 15107850
Assessing computational tools for the discovery of transcription factor binding sites.
Tompa M, Li N, Bailey TL, Church GM, De Moor B, Eskin E, Favorov AV, Frith MC, Fu Y, Kent WJ, Makeev VJ, Mironov AA, Noble WS, Pavesi G, Pesole G, Regnier M, Simonis N, Sinha S, Thijs G, van Helden J, Vandenbogaert M, Weng Z, Workman C, Ye C, Zhu Z., Nat. Biotechnol. 23(1), 2005
PMID: 15637633
Scaling laws in the functional content of genomes.
van Nimwegen E., Trends Genet. 19(9), 2003
PMID: 12957540
The DtxR regulon of Corynebacterium glutamicum.
Wennerhold J, Bott M., J. Bacteriol. 188(8), 2006
PMID: 16585752
Eubacterial sigma-factors.
Wosten MM., FEMS Microbiol. Rev. 22(3), 1998
PMID: 9818380
Genomic analysis of gene expression relationships in transcriptional regulatory networks.
Yu H, Luscombe NM, Qian J, Gerstein M., Trends Genet. 19(8), 2003
PMID: 12902159


Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®


PMID: 17227685
PubMed | Europe PMC

Suchen in

Google Scholar