Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling

Stracke R, Ishihara H, Huep G, Barsch A, Mehrtens F, Niehaus K, Weisshaar B (2007)
The Plant Journal 50(4): 660-677.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Stracke, RalfUniBi ; Ishihara, Hirofumi; Huep, GunnarUniBi; Barsch, Aiko; Mehrtens, Frank; Niehaus, KarstenUniBi; Weisshaar, BerndUniBi
Abstract / Bemerkung
The genes MYB11, MYB12 and MYB111 share significant structural similarity and form subgroup 7 of the Arabidopsis thaliana R2R3-MYB gene family. To determine the regulatory potential of these three transcription factors, we used a combination of genetic, functional genomics and metabolite analysis approaches. MYB11, MYB12 and MYB111 show a high degree of functional similarity and display very similar target gene specificity for several genes of flavonoid biosynthesis, including CHALCONE SYNTHASE, CHALCONE ISOMERASE, FLAVANONE 3-HYDROXYLASE and FLAVONOL SYNTHASE1. Seedlings of the triple mutant myb11 myb12 myb111, which genetically lack a complete subgroup of R2R3-MYB genes, do not form flavonols while the accumulation of anthocyanins is not affected. In developing seedlings, MYB11, MYB12 and MYB111 act in an additive manner due to their differential spatial activity; MYB12 controls flavonol biosynthesis mainly in the root, while MYB111 controls flavonol biosynthesis primarily in cotyledons. We identified and confirmed additional target genes of the R2R3-MYB subgroup 7 factors, including the UDP-glycosyltransferases UGT91A1 and UGT84A1, and we demonstrate that the accumulation of distinct and structurally identified flavonol glycosides in seedlings correlates with the expression domains of the different R2R3-MYB factors. Therefore, we refer to these genes as PFG1-3 for 'PRODUCTION OF FLAVONOL GLYCOSIDES'.
Stichworte
R2R3-MYB; gene regulation; flavonoid biosynthesis; Arabidopsis; PRODUCTION OFFLAVONOL GLYCOSIDES
Erscheinungsjahr
2007
Zeitschriftentitel
The Plant Journal
Band
50
Ausgabe
4
Seite(n)
660-677
ISSN
0960-7412
eISSN
1365-313X
Page URI
https://pub.uni-bielefeld.de/record/1593906

Zitieren

Stracke R, Ishihara H, Huep G, et al. Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. The Plant Journal. 2007;50(4):660-677.
Stracke, R., Ishihara, H., Huep, G., Barsch, A., Mehrtens, F., Niehaus, K., & Weisshaar, B. (2007). Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. The Plant Journal, 50(4), 660-677. https://doi.org/10.1111/j.1365-313X.2007.03078.x
Stracke, Ralf, Ishihara, Hirofumi, Huep, Gunnar, Barsch, Aiko, Mehrtens, Frank, Niehaus, Karsten, and Weisshaar, Bernd. 2007. “Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling”. The Plant Journal 50 (4): 660-677.
Stracke, R., Ishihara, H., Huep, G., Barsch, A., Mehrtens, F., Niehaus, K., and Weisshaar, B. (2007). Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. The Plant Journal 50, 660-677.
Stracke, R., et al., 2007. Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. The Plant Journal, 50(4), p 660-677.
R. Stracke, et al., “Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling”, The Plant Journal, vol. 50, 2007, pp. 660-677.
Stracke, R., Ishihara, H., Huep, G., Barsch, A., Mehrtens, F., Niehaus, K., Weisshaar, B.: Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. The Plant Journal. 50, 660-677 (2007).
Stracke, Ralf, Ishihara, Hirofumi, Huep, Gunnar, Barsch, Aiko, Mehrtens, Frank, Niehaus, Karsten, and Weisshaar, Bernd. “Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling”. The Plant Journal 50.4 (2007): 660-677.

298 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Epigenetic regulation of anthocyanin biosynthesis by an antagonistic interaction between H2A.Z and H3K4me3.
Cai H, Zhang M, Chai M, He Q, Huang X, Zhao L, Qin Y., New Phytol 221(1), 2019
PMID: 29959895
Impact of pulsed UV-B stress exposure on plant performance: How recovery periods stimulate secondary metabolism while reducing adaptive growth attenuation.
Höll J, Lindner S, Walter H, Joshi D, Poschet G, Pfleger S, Ziegler T, Hell R, Bogs J, Rausch T., Plant Cell Environ 42(3), 2019
PMID: 30049021
Activator-type R2R3-MYB genes induce a repressor-type R2R3-MYB gene to balance anthocyanin and proanthocyanidin accumulation.
Zhou H, Lin-Wang K, Wang F, Espley RV, Ren F, Zhao J, Ogutu C, He H, Jiang Q, Allan AC, Han Y., New Phytol 221(4), 2019
PMID: 30222199
Identification of potential genes involved in triterpenoid saponins biosynthesis in Gleditsia sinensis by transcriptome and metabolome analyses.
Kuwahara Y, Nakajima D, Shinpo S, Nakamura M, Kawano N, Kawahara N, Yamazaki M, Saito K, Suzuki H, Hirakawa H., J Nat Med 73(2), 2019
PMID: 30547286
Characterization of the Rosa roxburghii Tratt transcriptome and analysis of MYB genes.
Huang X, Yan H, Zhai L, Yang Z, Yi Y., PLoS One 14(3), 2019
PMID: 30860996
Regulation of anthocyanin accumulation via MYB75/HAT1/TPL-mediated transcriptional repression.
Zheng T, Tan W, Yang H, Zhang L, Li T, Liu B, Zhang D, Lin H., PLoS Genet 15(3), 2019
PMID: 30875369
Metabolic and molecular analysis of nonuniform anthocyanin pigmentation in tomato fruit under high light.
Zhang Y, Li Y, Li W, Hu Z, Yu X, Tu Y, Zhang M, Huang J, Chen G., Hortic Res 6(), 2019
PMID: 31098031
Analysis of Key Genes Involved in Potato Anthocyanin Biosynthesis Based on Genomics and Transcriptomics Data.
Tengkun N, Dongdong W, Xiaohui M, Yue C, Qin C., Front Plant Sci 10(), 2019
PMID: 31156673
StMYB44 negatively regulates anthocyanin biosynthesis at high temperatures in tuber flesh of potato.
Liu Y, Lin-Wang K, Espley RV, Wang L, Li Y, Liu Z, Zhou P, Zeng L, Zhang X, Zhang J, Allan AC., J Exp Bot 70(15), 2019
PMID: 31020330
The roles of AaMIXTA1 in regulating the initiation of glandular trichomes and cuticle biosynthesis in Artemisia annua.
Shi P, Fu X, Shen Q, Liu M, Pan Q, Tang Y, Jiang W, Lv Z, Yan T, Ma Y, Chen M, Hao X, Liu P, Li L, Sun X, Tang K., New Phytol 217(1), 2018
PMID: 28940606
SPL13 regulates shoot branching and flowering time in Medicago sativa.
Gao R, Gruber MY, Amyot L, Hannoufa A., Plant Mol Biol 96(1-2), 2018
PMID: 29149417
The R2R3-MYB Factor FhMYB5 From Freesia hybrida Contributes to the Regulation of Anthocyanin and Proanthocyanidin Biosynthesis.
Li Y, Shan X, Zhou L, Gao R, Yang S, Wang S, Wang L, Gao X., Front Plant Sci 9(), 2018
PMID: 30666265
Accumulation of the coumarin scopolin under abiotic stress conditions is mediated by the Arabidopsis thaliana THO/TREX complex.
Döll S, Kuhlmann M, Rutten T, Mette MF, Scharfenberg S, Petridis A, Berreth DC, Mock HP., Plant J 93(3), 2018
PMID: 29222952
Association mapping for total polyphenol content, total flavonoid content and antioxidant activity in barley.
Han Z, Zhang J, Cai S, Chen X, Quan X, Zhang G., BMC Genomics 19(1), 2018
PMID: 29370751
SlMYB12 Regulates Flavonol Synthesis in Three Different Cherry Tomato Varieties.
Wang S, Chu Z, Jia R, Dan F, Shen X, Li Y, Ding X., Sci Rep 8(1), 2018
PMID: 29371612
Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo.
Sakai K, Taconnat L, Borrega N, Yansouni J, Brunaud V, Paysant-Le Roux C, Delannoy E, Martin Magniette ML, Lepiniec L, Faure JD, Balzergue S, Dubreucq B., Plant Methods 14(), 2018
PMID: 29434651
Solar UV light regulates flavonoid metabolism in apple (Malus x domestica).
Henry-Kirk RA, Plunkett B, Hall M, McGhie T, Allan AC, Wargent JJ, Espley RV., Plant Cell Environ 41(3), 2018
PMID: 29315644
Jasmonate-responsive MYB factors spatially repress rutin biosynthesis in Fagopyrum tataricum.
Zhang K, Logacheva MD, Meng Y, Hu J, Wan D, Li L, Janovská D, Wang Z, Georgiev MI, Yu Z, Yang F, Yan M, Zhou M., J Exp Bot 69(8), 2018
PMID: 29394372
Purple Brassica oleracea var. capitata F. rubra is due to the loss of BoMYBL2-1 expression.
Song H, Yi H, Lee M, Han CT, Lee J, Kim H, Park JI, Nou IS, Kim SJ, Hur Y., BMC Plant Biol 18(1), 2018
PMID: 29739331
Biosynthesis of riccionidins and marchantins is regulated by R2R3-MYB transcription factors in Marchantia polymorpha.
Kubo H, Nozawa S, Hiwatashi T, Kondou Y, Nakabayashi R, Mori T, Saito K, Takanashi K, Kohchi T, Ishizaki K., J Plant Res 131(5), 2018
PMID: 29845372
Convergent evolution at the pathway level: predictable regulatory changes during flower color transitions.
Larter M, Dunbar-Wallis A, Berardi AE, Smith SD., Mol Biol Evol (), 2018
PMID: 29878153
Isolation and Characterization of the Flavonol Regulator CcMYB12 From the Globe Artichoke [Cynara cardunculus var. scolymus (L.) Fiori].
Blanco E, Sabetta W, Danzi D, Negro D, Passeri V, Lisi A, Paolocci F, Sonnante G., Front Plant Sci 9(), 2018
PMID: 30026747
Sucrose Signaling Regulates Anthocyanin Biosynthesis Through a MAPK Cascade in Arabidopsis thaliana.
Meng LS, Xu MK, Wan W, Yu F, Li C, Wang JY, Wei ZQ, Lv MJ, Cao XY, Li ZY, Jiang JH., Genetics 210(2), 2018
PMID: 30143593
BTB protein MdBT2 inhibits anthocyanin and proanthocyanidin biosynthesis by triggering MdMYB9 degradation in apple.
An JP, An XH, Yao JF, Wang XN, You CX, Wang XF, Hao YJ., Tree Physiol 38(10), 2018
PMID: 29897546
Low Temperature-Enhanced Flavonol Synthesis Requires Light-Associated Regulatory Components in Arabidopsis thaliana.
Bhatia C, Pandey A, Gaddam SR, Hoecker U, Trivedi PK., Plant Cell Physiol 59(10), 2018
PMID: 30010959
Sequencing of Euscaphis konishii Endocarp Transcriptome Points to Molecular Mechanisms of Endocarp Coloration.
Yuan X, Sun W, Zou X, Liu B, Huang W, Chen Z, Li Y, Qiu MY, Liu ZJ, Mao Y, Zou SQ., Int J Mol Sci 19(10), 2018
PMID: 30336592
Silencing of BnTT1 family genes affects seed flavonoid biosynthesis and alters seed fatty acid composition in Brassica napus.
Lian J, Lu X, Yin N, Ma L, Lu J, Liu X, Li J, Lu J, Lei B, Wang R, Chai Y., Plant Sci 254(), 2017
PMID: 27964783
Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity.
Kuhn BM, Nodzyński T, Errafi S, Bucher R, Gupta S, Aryal B, Dobrev P, Bigler L, Geisler M, Zažímalová E, Friml J, Ringli C., Sci Rep 7(), 2017
PMID: 28165500
Isolation and molecular characterization of a Lotus japonicus R2R3-MYB subgroup 7 transcription factor gene.
Kunihiro S, Tanabe D, Niwa Y, Kitamura K, Abe J, Yamada T., Plant Biotechnol (Tokyo) 34(1), 2017
PMID: 31275007
MYB12 and MYB22 play essential roles in proanthocyanidin and flavonol synthesis in red-fleshed apple (Malus sieversii f. niedzwetzkyana).
Wang N, Xu H, Jiang S, Zhang Z, Lu N, Qiu H, Qu C, Wang Y, Wu S, Chen X., Plant J 90(2), 2017
PMID: 28107780
Identification of Norway Spruce MYB-bHLH-WDR Transcription Factor Complex Members Linked to Regulation of the Flavonoid Pathway.
Nemesio-Gorriz M, Blair PB, Dalman K, Hammerbacher A, Arnerup J, Stenlid J, Mukhtar SM, Elfstrand M., Front Plant Sci 8(), 2017
PMID: 28337212
Spearmint R2R3-MYB transcription factor MsMYB negatively regulates monoterpene production and suppresses the expression of geranyl diphosphate synthase large subunit (MsGPPS.LSU).
Reddy VA, Wang Q, Dhar N, Kumar N, Venkatesh PN, Rajan C, Panicker D, Sridhar V, Mao HZ, Sarojam R., Plant Biotechnol J 15(9), 2017
PMID: 28160379
Contemporary Understanding of miRNA-Based Regulation of Secondary Metabolites Biosynthesis in Plants.
Gupta OP, Karkute SG, Banerjee S, Meena NL, Dahuja A., Front Plant Sci 8(), 2017
PMID: 28424705
Identification and expression analysis under abiotic stress of the R2R3-MYB genes in Ginkgo biloba L.
Liu X, Yu W, Zhang X, Wang G, Cao F, Cheng H., Physiol Mol Biol Plants 23(3), 2017
PMID: 28878490
LNK1 and LNK2 Corepressors Interact with the MYB3 Transcription Factor in Phenylpropanoid Biosynthesis.
Zhou M, Zhang K, Sun Z, Yan M, Chen C, Zhang X, Tang Y, Wu Y., Plant Physiol 174(3), 2017
PMID: 28483877
An R2R3-type MYB transcription factor, GmMYB29, regulates isoflavone biosynthesis in soybean.
Chu S, Wang J, Zhu Y, Liu S, Zhou X, Zhang H, Wang CE, Yang W, Tian Z, Cheng H, Yu D., PLoS Genet 13(5), 2017
PMID: 28489859
Transcriptome-Wide Identification of Novel UV-B- and Light Modulated Flavonol Pathway Genes Controlled by VviMYBF1.
Czemmel S, Höll J, Loyola R, Arce-Johnson P, Alcalde JA, Matus JT, Bogs J., Front Plant Sci 8(), 2017
PMID: 28690624
Isolation and characterization of GmMYBJ3, an R2R3-MYB transcription factor that affects isoflavonoids biosynthesis in soybean.
Zhao M, Wang T, Wu P, Guo W, Su L, Wang Y, Liu Y, Yan F, Wang Q., PLoS One 12(6), 2017
PMID: 28654660
The AtMYB12 activation domain maps to a short C-terminal region of the transcription factor.
Stracke R, Turgut-Kara N, Weisshaar B., Z Naturforsch C 72(7-8), 2017
PMID: 28284041
FtSAD2 and FtJAZ1 regulate activity of the FtMYB11 transcription repressor of the phenylpropanoid pathway in Fagopyrum tataricum.
Zhou M, Sun Z, Ding M, Logacheva MD, Kreft I, Wang D, Yan M, Shao J, Tang Y, Wu Y, Zhu X., New Phytol 216(3), 2017
PMID: 28722263
Profiling methyl jasmonate-responsive transcriptome for understanding induced systemic resistance in whitebark pine (Pinus albicaulis).
Liu JJ, Williams H, Li XR, Schoettle AW, Sniezko RA, Murray M, Zamany A, Roke G, Chen H., Plant Mol Biol 95(4-5), 2017
PMID: 28861810
Nucleotide patterns aiding in prediction of eukaryotic promoters.
Triska M, Solovyev V, Baranova A, Kel A, Tatarinova TV., PLoS One 12(11), 2017
PMID: 29141011
Tailoring tobacco hairy root metabolism for the production of stilbenes.
Hidalgo D, Georgiev M, Marchev A, Bru-Martínez R, Cusido RM, Corchete P, Palazon J., Sci Rep 7(1), 2017
PMID: 29269790
Gene transcript profiles in the desert plant Nitraria tangutorum during fruit development and ripening.
Wang J, Dang Z, Zhang H, Zheng L, Borjigin T, Wang Y., Mol Genet Genomics 291(1), 2016
PMID: 26388259
Mechanisms of Soybean Roots' Tolerances to Salinity Revealed by Proteomic and Phosphoproteomic Comparisons Between Two Cultivars.
Pi E, Qu L, Hu J, Huang Y, Qiu L, Lu H, Jiang B, Liu C, Peng T, Zhao Y, Wang H, Tsai SN, Ngai S, Du L., Mol Cell Proteomics 15(1), 2016
PMID: 26407991
New member of the R2R3-MYB transcription factors family in grapevine suppresses the anthocyanin accumulation in the flowers of transgenic tobacco.
Pérez-Díaz JR, Pérez-Díaz J, Madrid-Espinoza J, González-Villanueva E, Moreno Y, Ruiz-Lara S., Plant Mol Biol 90(1-2), 2016
PMID: 26497001
MYB-FL controls gain and loss of floral UV absorbance, a key trait affecting pollinator preference and reproductive isolation.
Sheehan H, Moser M, Klahre U, Esfeld K, Dell'Olivo A, Mandel T, Metzger S, Vandenbussche M, Freitas L, Kuhlemeier C., Nat Genet 48(2), 2016
PMID: 26656847
Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6.
Ishihara H, Tohge T, Viehöver P, Fernie AR, Weisshaar B, Stracke R., J Exp Bot 67(5), 2016
PMID: 26717955
Flavonols drive plant microevolution.
Grotewold E., Nat Genet 48(2), 2016
PMID: 26813762
Competition between anthocyanin and flavonol biosynthesis produces spatial pattern variation of floral pigments between Mimulus species.
Yuan YW, Rebocho AB, Sagawa JM, Stanley LE, Bradshaw HD., Proc Natl Acad Sci U S A 113(9), 2016
PMID: 26884205
Genetic architecture, biochemical underpinnings and ecological impact of floral UV patterning.
Brock MT, Lucas LK, Anderson NA, Rubin MJ, Markelz RJ, Covington MF, Devisetty UK, Chapple C, Maloof JN, Weinig C., Mol Ecol 25(5), 2016
PMID: 26800256
Transcriptomic Analysis of Soil-Grown Arabidopsis thaliana Roots and Shoots in Response to a Drought Stress.
Rasheed S, Bashir K, Matsui A, Tanaka M, Seki M., Front Plant Sci 7(), 2016
PMID: 26941754
Transcriptome and Biochemical Analysis of a Flower Color Polymorphism in Silene littorea (Caryophyllaceae).
Casimiro-Soriguer I, Narbona E, Buide ML, Del Valle JC, Whittall JB., Front Plant Sci 7(), 2016
PMID: 26973662
De Novo Transcriptome Analysis of Medicinally Important Plantago ovata Using RNA-Seq.
Kotwal S, Kaul S, Sharma P, Gupta M, Shankar R, Jain M, Dhar MK., PLoS One 11(3), 2016
PMID: 26943165
Characterization of Arabidopsis thaliana FLAVONOL SYNTHASE 1 (FLS1) -overexpression plants in response to abiotic stress.
Nguyen NH, Kim JH, Kwon J, Jeong CY, Lee W, Lee D, Hong SW, Lee H., Plant Physiol Biochem 103(), 2016
PMID: 26990404
Melatonin Improved Anthocyanin Accumulation by Regulating Gene Expressions and Resulted in High Reactive Oxygen Species Scavenging Capacity in Cabbage.
Zhang N, Sun Q, Li H, Li X, Cao Y, Zhang H, Li S, Zhang L, Qi Y, Ren S, Zhao B, Guo YD., Front Plant Sci 7(), 2016
PMID: 27047496
Genome-Wide Identification of R2R3-MYB Genes and Expression Analyses During Abiotic Stress in Gossypium raimondii.
He Q, Jones DC, Li W, Xie F, Ma J, Sun R, Wang Q, Zhu S, Zhang B., Sci Rep 6(), 2016
PMID: 27009386
MicroRNA858 Is a Potential Regulator of Phenylpropanoid Pathway and Plant Development.
Sharma D, Tiwari M, Pandey A, Bhatia C, Sharma A, Trivedi PK., Plant Physiol 171(2), 2016
PMID: 27208307
Characterization of a New Pink-Fruited Tomato Mutant Results in the Identification of a Null Allele of the SlMYB12 Transcription Factor.
Fernandez-Moreno JP, Tzfadia O, Forment J, Presa S, Rogachev I, Meir S, Orzaez D, Aharoni A, Granell A., Plant Physiol 171(3), 2016
PMID: 27208285
Characterization of a Citrus R2R3-MYB Transcription Factor that Regulates the Flavonol and Hydroxycinnamic Acid Biosynthesis.
Liu C, Long J, Zhu K, Liu L, Yang W, Zhang H, Li L, Xu Q, Deng X., Sci Rep 6(), 2016
PMID: 27162196
Whole-transcriptome analysis of differentially expressed genes in the ray florets and disc florets of Chrysanthemum morifolium.
Liu H, Sun M, Du D, Pan H, Cheng T, Wang J, Zhang Q, Gao Y., BMC Genomics 17(), 2016
PMID: 27225275
Overexpression of PtrMYB119, a R2R3-MYB transcription factor from Populus trichocarpa, promotes anthocyanin production in hybrid poplar.
Cho JS, Nguyen VP, Jeon HW, Kim MH, Eom SH, Lim YJ, Kim WC, Park EJ, Choi YI, Ko JH., Tree Physiol 36(9), 2016
PMID: 27259636
A Collection of Conserved Noncoding Sequences to Study Gene Regulation in Flowering Plants.
Van de Velde J, Van Bel M, Vaneechoutte D, Vandepoele K., Plant Physiol 171(4), 2016
PMID: 27261064
Exploiting Phenylpropanoid Derivatives to Enhance the Nutraceutical Values of Cereals and Legumes.
Dwivedi SL, Upadhyaya HD, Chung IM, De Vita P, García-Lara S, Guajardo-Flores D, Gutiérrez-Uribe JA, Serna-Saldívar SO, Rajakumar G, Sahrawat KL, Kumar J, Ortiz R., Front Plant Sci 7(), 2016
PMID: 27375635
Genome-wide identification and characterization of R2R3MYB family in Rosaceae.
González M, Carrasco B, Salazar E., Genom Data 9(), 2016
PMID: 27408811
Natural variation of root exudates in Arabidopsis thaliana-linking metabolomic and genomic data.
Mönchgesang S, Strehmel N, Schmidt S, Westphal L, Taruttis F, Müller E, Herklotz S, Neumann S, Scheel D., Sci Rep 6(), 2016
PMID: 27363486
ReadXplorer 2-detailed read mapping analysis and visualization from one single source.
Hilker R, Stadermann KB, Schwengers O, Anisiforov E, Jaenicke S, Weisshaar B, Zimmermann T, Goesmann A., Bioinformatics 32(24), 2016
PMID: 27540267
Flavonoids are determinants of freezing tolerance and cold acclimation in Arabidopsis thaliana.
Schulz E, Tohge T, Zuther E, Fernie AR, Hincha DK., Sci Rep 6(), 2016
PMID: 27658445
De novo Transcriptome Analysis Revealed Genes Involved in Flavonoid and Vitamin C Biosynthesis in Phyllanthus emblica (L.).
Kumar A, Kumar S, Bains S, Vaidya V, Singh B, Kaur R, Kaur J, Singh K., Front Plant Sci 7(), 2016
PMID: 27833630
The Onion (Allium cepa L.) R2R3-MYB Gene MYB1 Regulates Anthocyanin Biosynthesis.
Schwinn KE, Ngo H, Kenel F, Brummell DA, Albert NW, McCallum JA, Pither-Joyce M, Crowhurst RN, Eady C, Davies KM., Front Plant Sci 7(), 2016
PMID: 28018399
Systemic Responses of Barley to the 3-hydroxy-decanoyl-homoserine Lactone Producing Plant Beneficial Endophyte Acidovorax radicis N35.
Han S, Li D, Trost E, Mayer KF, Vlot AC, Heller W, Schmid M, Hartmann A, Rothballer M., Front Plant Sci 7(), 2016
PMID: 28018401
Anthocyanin biosynthesis for cold and freezing stress tolerance and desirable color in Brassica rapa.
Ahmed NU, Park JI, Jung HJ, Hur Y, Nou IS., Funct Integr Genomics 15(4), 2015
PMID: 25504198
Phenylpropanoids Accumulation in Eggplant Fruit: Characterization of Biosynthetic Genes and Regulation by a MYB Transcription Factor.
Docimo T, Francese G, Ruggiero A, Batelli G, De Palma M, Bassolino L, Toppino L, Rotino GL, Mennella G, Tucci M., Front Plant Sci 6(), 2015
PMID: 26858726
The phenylpropanoid pathway is controlled at different branches by a set of R2R3-MYB C2 repressors in grapevine.
Cavallini E, Matus JT, Finezzo L, Zenoni S, Loyola R, Guzzo F, Schlechter R, Ageorges A, Arce-Johnson P, Tornielli GB., Plant Physiol 167(4), 2015
PMID: 25659381
Production and transcriptional regulation of proanthocyanidin biosynthesis in forage legumes.
Zhou M, Wei L, Sun Z, Gao L, Meng Y, Tang Y, Wu Y., Appl Microbiol Biotechnol 99(9), 2015
PMID: 25805345
Natural variation in flavonol and anthocyanin metabolism during cold acclimation in Arabidopsis thaliana accessions.
Schulz E, Tohge T, Zuther E, Fernie AR, Hincha DK., Plant Cell Environ 38(8), 2015
PMID: 25689473
Small tandem target mimic-mediated blockage of microRNA858 induces anthocyanin accumulation in tomato.
Jia X, Shen J, Liu H, Li F, Ding N, Gao C, Pattanaik S, Patra B, Li R, Yuan L., Planta 242(1), 2015
PMID: 25916310
The Evolutionary History of R2R3-MYB Proteins Across 50 Eukaryotes: New Insights Into Subfamily Classification and Expansion.
Du H, Liang Z, Zhao S, Nan MG, Tran LS, Lu K, Huang YB, Li JN., Sci Rep 5(), 2015
PMID: 26047035
Characterization of an activation-tagged mutant uncovers a role of GLABRA2 in anthocyanin biosynthesis in Arabidopsis.
Wang X, Wang X, Hu Q, Dai X, Tian H, Zheng K, Wang X, Mao T, Chen JG, Wang S., Plant J 83(2), 2015
PMID: 26017690
Large Cellular Inclusions Accumulate in Arabidopsis Roots Exposed to Low-Sulfur Conditions.
Jackson TL, Baker GW, Wilks FR, Popov VA, Mathur J, Benfey PN., Plant Physiol 168(4), 2015
PMID: 26099270
AtMYB12 expression in tomato leads to large scale differential modulation in transcriptome and flavonoid content in leaf and fruit tissues.
Pandey A, Misra P, Choudhary D, Yadav R, Goel R, Bhambhani S, Sanyal I, Trivedi R, Trivedi PK., Sci Rep 5(), 2015
PMID: 26206248
Comparative Transcriptomes Analysis of Red- and White-Fleshed Apples in an F1 Population of Malus sieversii f. niedzwetzkyana Crossed with M. domestica 'Fuji'.
Wang N, Zheng Y, Duan N, Zhang Z, Ji X, Jiang S, Sun S, Yang L, Bai Y, Fei Z, Chen X., PLoS One 10(7), 2015
PMID: 26207813
A Kelch Domain-Containing F-Box Coding Gene Negatively Regulates Flavonoid Accumulation in Muskmelon.
Feder A, Burger J, Gao S, Lewinsohn E, Katzir N, Schaffer AA, Meir A, Davidovich-Rikanati R, Portnoy V, Gal-On A, Fei Z, Kashi Y, Tadmor Y., Plant Physiol 169(3), 2015
PMID: 26358418
The Arabidopsis Transcription Factor MYB112 Promotes Anthocyanin Formation during Salinity and under High Light Stress.
Lotkowska ME, Tohge T, Fernie AR, Xue GP, Balazadeh S, Mueller-Roeber B., Plant Physiol 169(3), 2015
PMID: 26378103
PyMYB10 and PyMYB10.1 Interact with bHLH to Enhance Anthocyanin Accumulation in Pears.
Feng S, Sun S, Chen X, Wu S, Wang D, Chen X., PLoS One 10(11), 2015
PMID: 26536358
MYBD employed by HY5 increases anthocyanin accumulation via repression of MYBL2 in Arabidopsis.
Nguyen NH, Jeong CY, Kang GH, Yoo SD, Hong SW, Lee H., Plant J 84(6), 2015
PMID: 26576746
Transcriptome analysis of the exocarp of apple fruit identifies light-induced genes involved in red color pigmentation.
Vimolmangkang S, Zheng D, Han Y, Khan MA, Soria-Guerra RE, Korban SS., Gene 534(1), 2014
PMID: 24140126
Kaempferol 3-O-rhamnoside-7-O-rhamnoside is an endogenous flavonol inhibitor of polar auxin transport in Arabidopsis shoots.
Yin R, Han K, Heller W, Albert A, Dobrev PI, Zažímalová E, Schäffner AR., New Phytol 201(2), 2014
PMID: 24251900
An R2R3-MYB transcription factor as a negative regulator of the flavonoid biosynthesis pathway in Ginkgo biloba.
Xu F, Ning Y, Zhang W, Liao Y, Li L, Cheng H, Cheng S., Funct Integr Genomics 14(1), 2014
PMID: 24306138
Opposite action of R2R3-MYBs from different subgroups on key genes of the shikimate and monolignol pathways in spruce.
Bomal C, Duval I, Giguère I, Fortin É, Caron S, Stewart D, Boyle B, Séguin A, MacKay JJ., J Exp Bot 65(2), 2014
PMID: 24336492
Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids.
Nakabayashi R, Yonekura-Sakakibara K, Urano K, Suzuki M, Yamada Y, Nishizawa T, Matsuda F, Kojima M, Sakakibara H, Shinozaki K, Michael AJ, Tohge T, Yamazaki M, Saito K., Plant J 77(3), 2014
PMID: 24274116
Cloning and characterization of a flavonol synthase gene from Scutellaria baicalensis.
Kim YB, Kim K, Kim Y, Tuan PA, Kim HH, Cho JW, Park SU., ScientificWorldJournal 2014(), 2014
PMID: 24672406
UVR8 mediated plant protective responses under low UV-B radiation leading to photosynthetic acclimation.
Singh S, Agrawal SB, Agrawal M., J Photochem Photobiol B 137(), 2014
PMID: 24780386
R2R3-MYB gene pairs in Populus: evolution and contribution to secondary wall formation and flowering time.
Chai G, Wang Z, Tang X, Yu L, Qi G, Wang D, Yan X, Kong Y, Zhou G., J Exp Bot 65(15), 2014
PMID: 24821954
Regulation of anthocyanin biosynthesis in peach fruits.
Rahim MA, Busatto N, Trainotti L., Planta 240(5), 2014
PMID: 24827911
Functional characterization of a new grapevine MYB transcription factor and regulation of proanthocyanidin biosynthesis in grapes.
Koyama K, Numata M, Nakajima I, Goto-Yamamoto N, Matsumura H, Tanaka N., J Exp Bot 65(15), 2014
PMID: 24860184
Anthocyanin biosynthetic genes in Brassica rapa.
Guo N, Cheng F, Wu J, Liu B, Zheng S, Liang J, Wang X., BMC Genomics 15(), 2014
PMID: 24893600
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection.
Appelhagen I, Thiedig K, Nordholt N, Schmidt N, Huep G, Sagasser M, Weisshaar B., Planta 240(5), 2014
PMID: 24903359
OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.).
Yang C, Li D, Liu X, Ji C, Hao L, Zhao X, Li X, Chen C, Cheng Z, Zhu L., BMC Plant Biol 14(), 2014
PMID: 24906444
Scratching the surface: genetic regulation of cuticle assembly in fleshy fruit.
Hen-Avivi S, Lashbrooke J, Costa F, Aharoni A., J Exp Bot 65(16), 2014
PMID: 24916070
Analysis of the transcriptome of Erigeron breviscapus uncovers putative scutellarin and chlorogenic acids biosynthetic genes and genetic markers.
Jiang NH, Zhang GH, Zhang JJ, Shu LP, Zhang W, Long GQ, Liu T, Meng ZG, Chen JW, Yang SC., PLoS One 9(6), 2014
PMID: 24956277
Genome-wide identification and characterization of R2R3MYB family in Solanum lycopersicum.
Zhao P, Li Q, Li J, Wang L, Ren Z., Mol Genet Genomics 289(6), 2014
PMID: 25005853
Transcriptome analysis of a petal anthocyanin polymorphism in the arctic mustard, Parrya nudicaulis.
Butler T, Dick C, Carlson ML, Whittall JB., PLoS One 9(7), 2014
PMID: 25033465
Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet (Beta vulgaris).
Stracke R, Holtgräwe D, Schneider J, Pucker B, Sörensen TR, Weisshaar B., BMC Plant Biol 14(), 2014
PMID: 25249410
Identification and molecular characterization of MYB Transcription Factor Superfamily in C4 model plant foxtail millet (Setaria italica L.).
Muthamilarasan M, Khandelwal R, Yadav CB, Bonthala VS, Khan Y, Prasad M., PLoS One 9(10), 2014
PMID: 25279462
Flavonoids as important molecules of plant interactions with the environment.
Mierziak J, Kostyn K, Kulma A., Molecules 19(10), 2014
PMID: 25310150
Arabidopsis ensemble reverse-engineered gene regulatory network discloses interconnected transcription factors in oxidative stress.
Vermeirssen V, De Clercq I, Van Parys T, Van Breusegem F, Van de Peer Y., Plant Cell 26(12), 2014
PMID: 25549671
The R2R3-MYB, bHLH, WD40, and related transcription factors in flavonoid biosynthesis.
Zhao L, Gao L, Wang H, Chen X, Wang Y, Yang H, Wei C, Wan X, Xia T., Funct Integr Genomics 13(1), 2013
PMID: 23184474
Evolutionary analysis of the MIXTA gene family highlights potential targets for the study of cellular differentiation.
Brockington SF, Alvarez-Fernandez R, Landis JB, Alcorn K, Walker RH, Thomas MM, Hileman LC, Glover BJ., Mol Biol Evol 30(3), 2013
PMID: 23188591
The evolution of phenylpropanoid metabolism in the green lineage.
Tohge T, Watanabe M, Hoefgen R, Fernie AR., Crit Rev Biochem Mol Biol 48(2), 2013
PMID: 23350798
Vitis vinifera secondary metabolism as affected by sulfate depletion: diagnosis through phenylpropanoid pathway genes and metabolites.
Tavares S, Vesentini D, Fernandes JC, Ferreira RB, Laureano O, Ricardo-Da-Silva JM, Amâncio S., Plant Physiol Biochem 66(), 2013
PMID: 23500714
Transcriptional regulation of flavonoid biosynthesis in nectarine (Prunus persica) by a set of R2R3 MYB transcription factors.
Ravaglia D, Espley RV, Henry-Kirk RA, Andreotti C, Ziosi V, Hellens RP, Costa G, Allan AC., BMC Plant Biol 13(), 2013
PMID: 23617716
The UVR8 UV-B Photoreceptor: Perception, Signaling and Response.
Tilbrook K, Arongaus AB, Binkert M, Heijde M, Yin R, Ulm R., Arabidopsis Book 11(), 2013
PMID: 23864838
MYB transcription factor genes as regulators for plant responses: an overview.
Ambawat S, Sharma P, Yadav NR, Yadav RC., Physiol Mol Biol Plants 19(3), 2013
PMID: 24431500
Differential stress-response expression of two flavonol synthase genes and accumulation of flavonols in tartary buckwheat.
Li X, Kim YB, Kim Y, Zhao S, Kim HH, Chung E, Lee JH, Park SU., J Plant Physiol 170(18), 2013
PMID: 23859559
A R2R3-MYB transcription factor from Epimedium sagittatum regulates the flavonoid biosynthetic pathway.
Huang W, Sun W, Lv H, Luo M, Zeng S, Pattanaik S, Yuan L, Wang Y., PLoS One 8(8), 2013
PMID: 23936468
Heterologous expression of gentian MYB1R transcription factors suppresses anthocyanin pigmentation in tobacco flowers.
Nakatsuka T, Yamada E, Saito M, Fujita K, Nishihara M., Plant Cell Rep 32(12), 2013
PMID: 24037114
Transcriptional regulation of secondary metabolite biosynthesis in plants.
Patra B, Schluttenhofer C, Wu Y, Pattanaik S, Yuan L., Biochim Biophys Acta 1829(11), 2013
PMID: 24113224
Coloring genetically modified soybean grains with anthocyanins by suppression of the proanthocyanidin genes ANR1 and ANR2.
Kovinich N, Saleem A, Rintoul TL, Brown DC, Arnason JT, Miki B., Transgenic Res 21(4), 2012
PMID: 22083247
Multivariate associations of flavonoid and biomass accumulation in white clover (Trifolium repens) under drought
Ballizany WL, Hofmann RW, Jahufer MZZ, Barrett BA., Funct Plant Biol 39(2), 2012
PMID: IND44675862
Feedback inhibition of the general phenylpropanoid and flavonol biosynthetic pathways upon a compromised flavonol-3-O-glycosylation.
Yin R, Messner B, Faus-Kessler T, Hoffmann T, Schwab W, Hajirezaei MR, von Saint Paul V, Heller W, Schäffner AR., J Exp Bot 63(7), 2012
PMID: 22249996
Transcription factor WRKY23 assists auxin distribution patterns during Arabidopsis root development through local control on flavonol biosynthesis.
Grunewald W, De Smet I, Lewis DR, Löfke C, Jansen L, Goeminne G, Vanden Bossche R, Karimi M, De Rybel B, Vanholme B, Teichmann T, Boerjan W, Van Montagu MC, Gheysen G, Muday GK, Friml J, Beeckman T., Proc Natl Acad Sci U S A 109(5), 2012
PMID: 22307611
Characterization, high-resolution mapping and differential expression of three homologous PAL genes in Coffea canephora Pierre (Rubiaceae).
Lepelley M, Mahesh V, McCarthy J, Rigoreau M, Crouzillat D, Chabrillange N, de Kochko A, Campa C., Planta 236(1), 2012
PMID: 22349733
Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis.
Routaboul JM, Dubos C, Beck G, Marquis C, Bidzinski P, Loudet O, Lepiniec L., J Exp Bot 63(10), 2012
PMID: 22442426
Evolution and expression of tandem duplicated maize flavonol synthase genes.
Falcone Ferreyra ML, Casas MI, Questa JI, Herrera AL, Deblasio S, Wang J, Jackson D, Grotewold E, Casati P., Front Plant Sci 3(), 2012
PMID: 22654889
Characterization of a glucosyltransferase enzyme involved in the formation of kaempferol and quercetin sophorosides in Crocus sativus.
Trapero A, Ahrazem O, Rubio-Moraga A, Jimeno ML, Gómez MD, Gómez-Gómez L., Plant Physiol 159(4), 2012
PMID: 22649274
The R2R3-MYB transcription factor gene family in maize.
Du H, Feng BR, Yang SS, Huang YB, Tang YX., PLoS One 7(6), 2012
PMID: 22719841
Cytokinins enhance sugar-induced anthocyanin biosynthesis in Arabidopsis.
Das PK, Shin DH, Choi SB, Yoo SD, Choi G, Park YI., Mol Cells 34(1), 2012
PMID: 22699753
Frequency-based time-series gene expression recomposition using PRIISM.
Rosa BA, Jiao Y, Oh S, Montgomery BL, Qin W, Chen J., BMC Syst Biol 6(), 2012
PMID: 22703599
Genetic and physical fine mapping of the novel brown midrib gene bm6 in maize (Zea mays L.) to a 180 kb region on chromosome 2.
Chen Y, Liu H, Ali F, Scott MP, Ji Q, Frei UK, Lübberstedt T., Theor Appl Genet 125(6), 2012
PMID: 22714805
Development of AtMYB12-expressing transgenic tobacco callus culture for production of rutin with biopesticidal potential.
Pandey A, Misra P, Chandrashekar K, Trivedi PK., Plant Cell Rep 31(10), 2012
PMID: 22733206
Genome-wide analysis of the MYB transcription factor superfamily in soybean.
Du H, Yang SS, Liang Z, Feng BR, Liu L, Huang YB, Tang YX., BMC Plant Biol 12(), 2012
PMID: 22776508
A genome-wide regulatory framework identifies maize pericarp color1 controlled genes.
Morohashi K, Casas MI, Falcone Ferreyra ML, Falcone Ferreyra L, Mejía-Guerra MK, Pourcel L, Yilmaz A, Feller A, Carvalho B, Emiliani J, Rodriguez E, Pellegrinet S, McMullen M, Casati P, Grotewold E., Plant Cell 24(7), 2012
PMID: 22822204
Flavonoids: biosynthesis, biological functions, and biotechnological applications.
Falcone Ferreyra ML, Rius SP, Casati P., Front Plant Sci 3(), 2012
PMID: 23060891
Insights into the molecular mechanism of RGL2-mediated inhibition of seed germination in Arabidopsis thaliana.
Stamm P, Ravindran P, Mohanty B, Tan EL, Yu H, Kumar PP., BMC Plant Biol 12(), 2012
PMID: 23035751
AtMYB12 gene: a novel visible marker for wheat transformation.
Gao X, Zhang L, Zhou S, Wang C, Deng X, Zhang H, Yang G, Javeed H, He G., Mol Biol Rep 38(1), 2011
PMID: 20352344
Metabolic engineering of the plant primary-secondary metabolism interface.
Aharoni A, Galili G., Curr Opin Biotechnol 22(2), 2011
PMID: 21144730
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway.
Hichri I, Barrieu F, Bogs J, Kappel C, Delrot S, Lauvergeat V., J Exp Bot 62(8), 2011
PMID: 21278228
Auxin and ethylene induce flavonol accumulation through distinct transcriptional networks.
Lewis DR, Ramirez MV, Miller ND, Vallabhaneni P, Ray WK, Helm RF, Winkel BS, Muday GK., Plant Physiol 156(1), 2011
PMID: 21427279
Evolutionary and comparative analysis of MYB and bHLH plant transcription factors.
Feller A, Machemer K, Braun EL, Grotewold E., Plant J 66(1), 2011
PMID: 21443626
Arctic mustard flower color polymorphism controlled by petal-specific downregulation at the threshold of the anthocyanin biosynthetic pathway.
Dick CA, Buenrostro J, Butler T, Carlson ML, Kliebenstein DJ, Whittall JB., PLoS One 6(4), 2011
PMID: 21490971
Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor.
Gou JY, Felippes FF, Liu CJ, Weigel D, Wang JW., Plant Cell 23(4), 2011
PMID: 21487097
Flavonols accumulate asymmetrically and affect auxin transport in Arabidopsis.
Kuhn BM, Geisler M, Bigler L, Ringli C., Plant Physiol 156(2), 2011
PMID: 21502189
Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes.
Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R., Gene 484(1-2), 2011
PMID: 21683773
From models to crop species: caveats and solutions for translational metabolomics.
Tohge T, Mettler T, Arrivault S, Carroll AJ, Stitt M, Fernie AR., Front Plant Sci 2(), 2011
PMID: 22639601
Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development.
Rohrmann J, Tohge T, Alba R, Osorio S, Caldana C, McQuinn R, Arvidsson S, van der Merwe MJ, Riaño-Pachón DM, Mueller-Roeber B, Fei Z, Nesi AN, Giovannoni JJ, Fernie AR., Plant J 68(6), 2011
PMID: 21851430
The Arabidopsis bZIP transcription factor HY5 regulates expression of the PFG1/MYB12 gene in response to light and ultraviolet-B radiation.
Stracke R, Favory JJ, Gruber H, Bartelniewoehner L, Bartels S, Binkert M, Funk M, Weisshaar B, Ulm R., Plant Cell Environ 33(1), 2010
PMID: 19895401
Biochemical and molecular analysis of pink tomatoes: deregulated expression of the gene encoding transcription factor SlMYB12 leads to pink tomato fruit color.
Ballester AR, Molthoff J, de Vos R, Hekkert Bt, Orzaez D, Fernández-Moreno JP, Tripodi P, Grandillo S, Martin C, Heldens J, Ykema M, Granell A, Bovy A., Plant Physiol 152(1), 2010
PMID: 19906891
Metabolomic, transcriptional, hormonal, and signaling cross-talk in superroot2.
Morant M, Ekstrøm C, Ulvskov P, Kristensen C, Rudemo M, Olsen CE, Hansen J, Jørgensen K, Jørgensen B, Møller BL, Bak S., Mol Plant 3(1), 2010
PMID: 20008451
Differential expression of CHS7 and CHS8 genes in soybean.
Yi J, Derynck MR, Chen L, Dhaubhadel S., Planta 231(3), 2010
PMID: 20016991
Phenylpropanoid biosynthesis.
Vogt T., Mol Plant 3(1), 2010
PMID: 20035037
Functional diversity at the Rc (red coleoptile) gene in bread wheat
Khlestkina EK, Röder MS, Pshenichnikova TA, Börner A., Mol Breed 25(1), 2010
PMID: IND44304447
Cloning and characterization of a UV-B-inducible maize flavonol synthase.
Falcone Ferreyra ML, Rius S, Emiliani J, Pourcel L, Feller A, Morohashi K, Casati P, Grotewold E., Plant J 62(1), 2010
PMID: 20059741
Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.).
Matus JT, Poupin MJ, Cañón P, Bordeu E, Alcalde JA, Arce-Johnson P., Plant Mol Biol 72(6), 2010
PMID: 20112051
Isolation and functional characterization of a floral tissue-specific R2R3 MYB regulator from tobacco.
Pattanaik S, Kong Q, Zaitlin D, Werkman JR, Xie CH, Patra B, Yuan L., Planta 231(5), 2010
PMID: 20157728
Modulation of transcriptome and metabolome of tobacco by Arabidopsis transcription factor, AtMYB12, leads to insect resistance.
Misra P, Pandey A, Tiwari M, Chandrashekar K, Sidhu OP, Asif MH, Chakrabarty D, Singh PK, Trivedi PK, Nath P, Tuli R., Plant Physiol 152(4), 2010
PMID: 20190095
Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research.
North H, Baud S, Debeaujon I, Dubos C, Dubreucq B, Grappin P, Jullien M, Lepiniec L, Marion-Poll A, Miquel M, Rajjou L, Routaboul JM, Caboche M., Plant J 61(6), 2010
PMID: 20409271
A polyhedral approach for understanding flavonoid biosynthesis in Arabidopsis.
Nakabayashi R, Yamazaki M, Saito K., N Biotechnol 27(6), 2010
PMID: 20227538
An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae.
Lin-Wang K, Bolitho K, Grafton K, Kortstee A, Karunairetnam S, McGhie TK, Espley RV, Hellens RP, Allan AC., BMC Plant Biol 10(), 2010
PMID: 20302676
A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis.
Sønderby IE, Burow M, Rowe HC, Kliebenstein DJ, Halkier BA., Plant Physiol 153(1), 2010
PMID: 20348214
Ectopic expression of apple F3'H genes contributes to anthocyanin accumulation in the Arabidopsis tt7 mutant grown under nitrogen stress.
Han Y, Vimolmangkang S, Soria-Guerra RE, Rosales-Mendoza S, Zheng D, Lygin AV, Korban SS., Plant Physiol 153(2), 2010
PMID: 20357139
MYB transcription factors in Arabidopsis.
Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L., Trends Plant Sci 15(10), 2010
PMID: 20674465
Partitioning of new carbon as ¹¹C in Nicotiana tabacum reveals insight into methyl jasmonate induced changes in metabolism.
Hanik N, Gómez S, Best M, Schueller M, Orians CM, Ferrieri RA., J Chem Ecol 36(10), 2010
PMID: 20842413
Ethylene suppression of sugar-induced anthocyanin pigmentation in Arabidopsis.
Jeong SW, Das PK, Jeoung SC, Song JY, Lee HK, Kim YK, Kim WJ, Park YI, Yoo SD, Choi SB, Choi G, Park YI., Plant Physiol 154(3), 2010
PMID: 20876338
A new dominant Arabidopsis transparent testa mutant, sk21-D, and modulation of seed flavonoid biosynthesis by KAN4.
Gao P, Li X, Cui D, Wu L, Parkin I, Gruber MY., Plant Biotechnol J 8(9), 2010
PMID: 20444210
Accumulation of flavonoids in an ntra ntrb mutant leads to tolerance to UV-C.
Bashandy T, Taconnat L, Renou JP, Meyer Y, Reichheld JP., Mol Plant 2(2), 2009
PMID: 19825611
Metabolomic and genetic analyses of flavonol synthesis in Arabidopsis thaliana support the in vivo involvement of leucoanthocyanidin dioxygenase.
Stracke R, De Vos RC, Bartelniewoehner L, Ishihara H, Sagasser M, Martens S, Weisshaar B., Planta 229(2), 2009
PMID: 18998159
Expansion and diversification of the Populus R2R3-MYB family of transcription factors.
Wilkins O, Nahal H, Foong J, Provart NJ, Campbell MM., Plant Physiol 149(2), 2009
PMID: 19091872
Ectopic expression of VvMybPA2 promotes proanthocyanidin biosynthesis in grapevine and suggests additional targets in the pathway.
Terrier N, Torregrosa L, Ageorges A, Vialet S, Verriès C, Cheynier V, Romieu C., Plant Physiol 149(2), 2009
PMID: 19098092
Post-veraison sunlight exposure induces MYB-mediated transcriptional regulation of anthocyanin and flavonol synthesis in berry skins of Vitis vinifera.
Matus JT, Loyola R, Vega A, Peña-Neira A, Bordeu E, Arce-Johnson P, Alcalde JA., J Exp Bot 60(3), 2009
PMID: 19129169
Light-induced vegetative anthocyanin pigmentation in Petunia.
Albert NW, Lewis DH, Zhang H, Irving LJ, Jameson PE, Davies KM., J Exp Bot 60(7), 2009
PMID: 19380423
Differing acceptance of familiar and unfamiliar plant species by an oligophagous beetle
Kühnle Anne, Müller Caroline., Entomol Exp Appl 131(2), 2009
PMID: IND44189001
Arabidopsis thaliana expresses a second functional flavonol synthase.
Preuss A, Stracke R, Weisshaar B, Hillebrecht A, Matern U, Martens S., FEBS Lett 583(12), 2009
PMID: 19433090
Molecular mechanism for jasmonate-induction of anthocyanin accumulation in Arabidopsis.
Shan X, Zhang Y, Peng W, Wang Z, Xie D., J Exp Bot 60(13), 2009
PMID: 19596700
Anthocyanin biosynthesis genes location and expression in wheat-rye hybrids.
Khlestkina EK, Tereshchenko OY, Salina EA., Mol Genet Genomics 282(5), 2009
PMID: 19727825
The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries.
Czemmel S, Stracke R, Weisshaar B, Cordon N, Harris NN, Walker AR, Robinson SP, Bogs J., Plant Physiol 151(3), 2009
PMID: 19741049
Pleiotropic changes in Arabidopsis f5h and sct mutants revealed by large-scale gene expression and metabolite analysis.
Huang J, Bhinu VS, Li X, Dallal Bashi Z, Zhou R, Hannoufa A., Planta 230(5), 2009
PMID: 19714359
Fruit-surface flavonoid accumulation in tomato is controlled by a SlMYB12-regulated transcriptional network.
Adato A, Mandel T, Mintz-Oron S, Venger I, Levy D, Yativ M, Domínguez E, Wang Z, De Vos RC, Jetter R, Schreiber L, Heredia A, Rogachev I, Aharoni A., PLoS Genet 5(12), 2009
PMID: 20019811
Functional analysis of a predicted flavonol synthase gene family in Arabidopsis.
Owens DK, Alerding AB, Crosby KC, Bandara AB, Westwood JH, Winkel BS., Plant Physiol 147(3), 2008
PMID: 18467451
MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana.
Dubos C, Le Gourrierec J, Baudry A, Huep G, Lanet E, Debeaujon I, Routaboul JM, Alboresi A, Weisshaar B, Lepiniec L., Plant J 55(6), 2008
PMID: 18532978
AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenol.
Luo J, Butelli E, Hill L, Parr A, Niggeweg R, Bailey P, Weisshaar B, Martin C., Plant J 56(2), 2008
PMID: 18643978
Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis.
Yonekura-Sakakibara K, Tohge T, Matsuda F, Nakabayashi R, Takayama H, Niida R, Watanabe-Takahashi A, Inoue E, Saito K., Plant Cell 20(8), 2008
PMID: 18757557
The transcript and metabolite networks affected by the two clades of Arabidopsis glucosinolate biosynthesis regulators.
Malitsky S, Blum E, Less H, Venger I, Elbaz M, Morin S, Eshed Y, Aharoni A., Plant Physiol 148(4), 2008
PMID: 18829985
Identification and characterization of R2R3-MYB and bHLH transcription factors regulating anthocyanin biosynthesis in gentian flowers.
Nakatsuka T, Haruta KS, Pitaksutheepong C, Abe Y, Kakizaki Y, Yamamoto K, Shimada N, Yamamura S, Nishihara M., Plant Cell Physiol 49(12), 2008
PMID: 18974195
Molecular characterization of EgMYB1, a putative transcriptional repressor of the lignin biosynthetic pathway
Legay S, Lacombe E, Goicoechea M, Brière C, Séguin A, Mackay J, Grima-Pettenati J., Plant Sci 173(5), 2007
PMID: IND43961335
SAD2, an importin -like protein, is required for UV-B response in Arabidopsis by mediating MYB4 nuclear trafficking.
Zhao J, Zhang W, Zhao Y, Gong X, Guo L, Zhu G, Wang X, Gong Z, Schumaker KS, Guo Y., Plant Cell 19(11), 2007
PMID: 17993626

63 References

Daten bereitgestellt von Europe PubMed Central.

Genome-wide insertional mutagenesis of Arabidopsis thaliana.
Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen H, Shinn P, Stevenson DK, Zimmerman J, Barajas P, Cheuk R, Gadrinab C, Heller C, Jeske A, Koesema E, Meyers CC, Parker H, Prednis L, Ansari Y, Choy N, Deen H, Geralt M, Hazari N, Hom E, Karnes M, Mulholland C, Ndubaku R, Schmidt I, Guzman P, Aguilar-Henonin L, Schmid M, Weigel D, Carter DE, Marchand T, Risseeuw E, Brogden D, Zeko A, Crosby WL, Berry CC, Ecker JR., Science 301(5633), 2003
PMID: 12893945
A gene expression map of the Arabidopsis root.
Birnbaum K, Shasha DE, Wang JY, Jung JW, Lambert GM, Galbraith DW, Benfey PN., Science 302(5652), 2003
PMID: 14671301
Flavonols, flavone and anthocyanins as natural antioxidants of food and their possible role in the prevention of chronic diseases
Böhm H., 1998
Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis.
Borevitz JO, Xia Y, Blount J, Dixon RA, Lamb C., Plant Cell 12(12), 2000
PMID: 11148285
Flavonoids act as negative regulators of auxin transport in vivo in arabidopsis.
Brown DE, Rashotte AM, Murphy AS, Normanly J, Tague BW, Peer WA, Taiz L, Muday GK, Muday GK, Brown CS., Plant Physiol. 126(2), 2001
PMID: 11402184
Ethylene modulates flavonoid accumulation and gravitropic responses in roots of Arabidopsis.
Buer CS, Sukumar P, Muday GK., Plant Physiol. 140(4), 2006
PMID: 16489132
Advances in flavonoid research since 1992.
Harborne JB, Williams CA., Phytochemistry 55(6), 2000
PMID: 11130659
Naturally occurring auxin transport regulators.
Jacobs M, Rubery PH., Science 241(4863), 1988
PMID: 17734864
Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis.
Jin H, Cominelli E, Bailey P, Parr A, Mehrtens F, Jones J, Tonelli C, Weisshaar B, Martin C., EMBO J. 19(22), 2000
PMID: 11080161
UGT73C6 and UGT78D1, glycosyltransferases involved in flavonol glycoside biosynthesis in Arabidopsis thaliana.
Jones P, Messner B, Nakajima J, Schaffner AR, Saito K., J. Biol. Chem. 278(45), 2003
PMID: 12900416
Metabolon formation and metabolic channeling in the biosynthesis of plant natural products.
Jorgensen K, Rasmussen AV, Morant M, Nielsen AH, Bjarnholt N, Zagrobelny M, Bak S, Moller BL., Curr. Opin. Plant Biol. 8(3), 2005
PMID: 15860425
Ectopic expression of the Arabidopsis AtMYB23 gene induces differentiation of trichome cells.
Kirik V, Schnittger A, Radchuk V, Adler K, Hulskamp M, Baumlein H., Dev. Biol. 235(2), 2001
PMID: 11437443
Flavonoids: a colorful model for the regulation and evolution of biochemical pathways.
Koes R, Verweij W, Quattrocchio F., Trends Plant Sci. 10(5), 2005
PMID: 15882656
Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana.
Kranz HD, Denekamp M, Greco R, Jin H, Leyva A, Meissner RC, Petroni K, Urzainqui A, Bevan M, Martin C, Smeekens S, Tonelli C, Paz-Ares J, Weisshaar B., Plant J. 16(2), 1998
PMID: 9839469
MAX1, a regulator of the flavonoid pathway, controls vegetative axillary bud outgrowth in Arabidopsis.
Lazar G, Goodman HM., Proc. Natl. Acad. Sci. U.S.A. 103(2), 2005
PMID: 16387852
Genetics and biochemistry of seed flavonoids.
Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M., Annu Rev Plant Biol 57(), 2006
PMID: 16669768
Identification of glucosyltransferase genes involved in sinapate metabolism and lignin synthesis in Arabidopsis.
Lim EK, Li Y, Parr A, Jackson R, Ashford DA, Bowles DJ., J. Biol. Chem. 276(6), 2000
PMID: 11042211
The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis.
Mehrtens F, Kranz H, Bednarek P, Weisshaar B., Plant Physiol. 138(2), 2005
PMID: 15923334
How genes paint flowers and seeds
Mol J., 1998
Regulation of auxin transport by aminopeptidases and endogenous flavonoids.
Murphy A, Peer WA, Taiz L., Planta 211(3), 2000
PMID: 10987549
The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques.
Nesi N, Debeaujon I, Jond C, Pelletier G, Caboche M, Lepiniec L., Plant Cell 12(10), 2000
PMID: 11041882
Differential flavonoid response to enhanced UV-B radiation in
Olsson LC., 1998
Shortterm UVB radiation and ozone exposure effects on aromatic secondary metabolite accumulation and shoot growth of flavonoid-deficient Arabidopsis mutants
Ormrod DP., 1995
Flavonoid accumulation patterns of transparent testa mutants of arabidopsis.
Peer WA, Brown DE, Tague BW, Muday GK, Taiz L, Murphy AS, Muday GK., Plant Physiol. 126(2), 2001
PMID: 11402185
Flavonoids as antioxidants.
Pietta PG., J. Nat. Prod. 63(7), 2000
PMID: 10924197
AtMYB32 is required for normal pollen development in Arabidopsis thaliana.
Preston J, Wheeler J, Heazlewood J, Li SF, Parish RW., Plant J. 40(6), 2004
PMID: 15584962
MYB-bHLH-WD40 protein complex and the evolution of cellular diversity.
Ramsay NA, Glover BJ., Trends Plant Sci. 10(2), 2005
PMID: 15708343
Dietary flavonoids: bioavailability, metabolic effects, and safety.
Ross JA, Kasum CM., Annu. Rev. Nutr. 22(), 2002
PMID: 12055336
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics.
Rosso MG, Li Y, Strizhov N, Reiss B, Dekker K, Weisshaar B., Plant Mol. Biol. 53(1-2), 2003
PMID: 14756321
Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana.
Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L., Planta 224(1), 2006
PMID: 16395586

Sambrook J., 1989
Localization of flavonoid enzymes in Arabidopsis roots.
Saslowsky D, Winkel-Shirley B., Plant J. 27(1), 2001
PMID: 11489181
An allelic series for the chalcone synthase locus in Arabidopsis.
Saslowsky DE, Dana CD, Winkel-Shirley B., Gene 255(2), 2000
PMID: 11024274
The tomato Blind gene encodes a MYB transcription factor that controls the formation of lateral meristems.
Schmitz G, Tillmann E, Carriero F, Fiore C, Cellini F, Theres K., Proc. Natl. Acad. Sci. U.S.A. 99(2), 2002
PMID: 11805344
Functional architecture of the light-responsive chalcone synthase promoter from parsley.
Schulze-Lefert P, Becker-Andre M, Schulz W, Hahlbrock K, Dangl JL., Plant Cell 1(7), 1989
PMID: 2535519
Flavonoid-specific staining of Arabidopsis thaliana.
Sheahan JJ, Rechnitz GA., BioTechniques 13(6), 1992
PMID: 1282347
Differential visualization of mutants in
Sheahan JJ., 1993
Significance of skin flavonoids for UV-B-protection in apple fruits.
Solovchenko A, Schmitz-Eiberger M., J. Exp. Bot. 54(389), 2003
PMID: 12815032
Profiling of phenolic glycosidic conjugates in leaves of using LC/MS
Stobiecki M., 2006
The R2R3-MYB gene family in Arabidopsis thaliana.
Stracke R, Werber M, Weisshaar B., Curr. Opin. Plant Biol. 4(5), 2001
PMID: 11597504
Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor.
Tohge T, Nishiyama Y, Hirai MY, Yano M, Nakajima J, Awazuhara M, Inoue E, Takahashi H, Goodenowe DB, Kitayama M, Noji M, Yamazaki M, Saito K., Plant J. 42(2), 2005
PMID: 15807784

Wagner H., 1995
Phenylpropanoid biosynthesis and its regulation.
Weisshaar B, Jenkins GI., Curr. Opin. Plant Biol. 1(3), 1998
PMID: 10066590
Evidence for enzyme complexes in the phenylpropanoid and flavonoid pathways
Winkel-Shirley B., 1999
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 17419845
PubMed | Europe PMC

Suchen in

Google Scholar