Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins
Radu I, Schleeger M, Bolwien C, Heberle J (2009)
PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 8(11): 1517-1528.
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Autor*in
Radu, Ionela;
Schleeger, Michael;
Bolwien, Carsten;
Heberle, Joachim
Abstract / Bemerkung
The introduction of time-resolved Fourier transform infrared (FT-IR) spectroscopy to biochemistry opened the possibility of monitoring the catalytic mechanism of proteins along their reaction pathways. The infrared approach is very fruitful, particularly in the application to membrane proteins where NMR and X-ray crystallography are challenged by the size and protein hydrophobicity, as well as by their limited time-resolution. Here, we summarize the principles and experimental realizations of time-resolved FT-IR spectroscopy developed in our group and compare with aspects emerging from other laboratories. Examples of applications to retinal proteins and energy transduction complexes are reviewed, which emphasize the impact of time-resolved FT-IR spectroscopy on the understanding of protein reactions on the level of single bonds.
Erscheinungsjahr
2009
Zeitschriftentitel
PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES
Band
8
Ausgabe
11
Seite(n)
1517-1528
ISSN
1474-905X
eISSN
1474-9092
Page URI
https://pub.uni-bielefeld.de/record/1589780
Zitieren
Radu I, Schleeger M, Bolwien C, Heberle J. Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES. 2009;8(11):1517-1528.
Radu, I., Schleeger, M., Bolwien, C., & Heberle, J. (2009). Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES, 8(11), 1517-1528. https://doi.org/10.1039/b9pp00050j
Radu, Ionela, Schleeger, Michael, Bolwien, Carsten, and Heberle, Joachim. 2009. “Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins”. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 8 (11): 1517-1528.
Radu, I., Schleeger, M., Bolwien, C., and Heberle, J. (2009). Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 8, 1517-1528.
Radu, I., et al., 2009. Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES, 8(11), p 1517-1528.
I. Radu, et al., “Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins”, PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES, vol. 8, 2009, pp. 1517-1528.
Radu, I., Schleeger, M., Bolwien, C., Heberle, J.: Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES. 8, 1517-1528 (2009).
Radu, Ionela, Schleeger, Michael, Bolwien, Carsten, and Heberle, Joachim. “Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins”. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES 8.11 (2009): 1517-1528.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
22 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Protein dynamics observed by tunable mid-IR quantum cascade lasers across the time range from 10ns to 1s.
Schultz BJ, Mohrmann H, Lorenz-Fonfria VA, Heberle J., Spectrochim Acta A Mol Biomol Spectrosc 188(), 2018
PMID: 28110813
Schultz BJ, Mohrmann H, Lorenz-Fonfria VA, Heberle J., Spectrochim Acta A Mol Biomol Spectrosc 188(), 2018
PMID: 28110813
Time-resolved infrared spectroscopy in the study of photosynthetic systems.
Mezzetti A, Leibl W., Photosynth Res 131(2), 2017
PMID: 27678250
Mezzetti A, Leibl W., Photosynth Res 131(2), 2017
PMID: 27678250
Decoupled side chain and backbone dynamics for proton translocation - M2 of influenza A.
Kalita MM, Fischer WB., J Mol Model 23(7), 2017
PMID: 28646429
Kalita MM, Fischer WB., J Mol Model 23(7), 2017
PMID: 28646429
Ultrafast structural molecular dynamics investigated with 2D infrared spectroscopy methods.
Kraack JP., Top Curr Chem (Cham) 375(6), 2017
PMID: 29071445
Kraack JP., Top Curr Chem (Cham) 375(6), 2017
PMID: 29071445
New ultrarapid-scanning interferometer for FT-IR spectroscopy with microsecond time-resolution.
Süss B, Ringleb F, Heberle J., Rev Sci Instrum 87(6), 2016
PMID: 27370432
Süss B, Ringleb F, Heberle J., Rev Sci Instrum 87(6), 2016
PMID: 27370432
Time-resolved infrared spectroscopic studies of ligand dynamics in the active site from cytochrome c oxidase.
Vos MH, Liebl U., Biochim Biophys Acta 1847(1), 2015
PMID: 25117435
Vos MH, Liebl U., Biochim Biophys Acta 1847(1), 2015
PMID: 25117435
Chimeras of channelrhodopsin-1 and -2 from Chlamydomonas reinhardtii exhibit distinctive light-induced structural changes from channelrhodopsin-2.
Inaguma A, Tsukamoto H, Kato HE, Kimura T, Ishizuka T, Oishi S, Yawo H, Nureki O, Furutani Y., J Biol Chem 290(18), 2015
PMID: 25796616
Inaguma A, Tsukamoto H, Kato HE, Kimura T, Ishizuka T, Oishi S, Yawo H, Nureki O, Furutani Y., J Biol Chem 290(18), 2015
PMID: 25796616
2D attenuated total reflectance infrared spectroscopy reveals ultrafast vibrational dynamics of organic monolayers at metal-liquid interfaces.
Kraack JP, Lotti D, Hamm P., J Chem Phys 142(21), 2015
PMID: 26049433
Kraack JP, Lotti D, Hamm P., J Chem Phys 142(21), 2015
PMID: 26049433
Kinetic and vibrational isotope effects of proton transfer reactions in channelrhodopsin-2.
Resler T, Schultz BJ, Lórenz-Fonfría VA, Schlesinger R, Heberle J., Biophys J 109(2), 2015
PMID: 26200864
Resler T, Schultz BJ, Lórenz-Fonfría VA, Schlesinger R, Heberle J., Biophys J 109(2), 2015
PMID: 26200864
Light-Induced Infrared Difference Spectroscopy in the Investigation of Light Harvesting Complexes.
Mezzetti A., Molecules 20(7), 2015
PMID: 26151118
Mezzetti A., Molecules 20(7), 2015
PMID: 26151118
Specific interactions between alkali metal cations and the KcsA channel studied using ATR-FTIR spectroscopy.
Furutani Y, Shimizu H, Asai Y, Oiki S, Kandori H., Biophys Physicobiol 12(), 2015
PMID: 27493853
Furutani Y, Shimizu H, Asai Y, Oiki S, Kandori H., Biophys Physicobiol 12(), 2015
PMID: 27493853
Temporal evolution of helix hydration in a light-gated ion channel correlates with ion conductance.
Lórenz-Fonfría VA, Bamann C, Resler T, Schlesinger R, Bamberg E, Heberle J., Proc Natl Acad Sci U S A 112(43), 2015
PMID: 26460012
Lórenz-Fonfría VA, Bamann C, Resler T, Schlesinger R, Bamberg E, Heberle J., Proc Natl Acad Sci U S A 112(43), 2015
PMID: 26460012
Proton transfer and protein conformation dynamics in photosensitive proteins by time-resolved step-scan Fourier-transform infrared spectroscopy.
Lórenz-Fonfría VA, Heberle J., J Vis Exp (88), 2014
PMID: 24998200
Lórenz-Fonfría VA, Heberle J., J Vis Exp (88), 2014
PMID: 24998200
Ligand migration through hemeprotein cavities: insights from laser flash photolysis and molecular dynamics simulations.
Abbruzzetti S, Spyrakis F, Bidon-Chanal A, Luque FJ, Viappiani C., Phys Chem Chem Phys 15(26), 2013
PMID: 23733145
Abbruzzetti S, Spyrakis F, Bidon-Chanal A, Luque FJ, Viappiani C., Phys Chem Chem Phys 15(26), 2013
PMID: 23733145
Surface-enhanced infrared absorption spectroscopy (SEIRAS) to probe monolayers of membrane proteins.
Ataka K, Stripp ST, Heberle J., Biochim Biophys Acta 1828(10), 2013
PMID: 23816441
Ataka K, Stripp ST, Heberle J., Biochim Biophys Acta 1828(10), 2013
PMID: 23816441
Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system.
Kubo M, Nakashima S, Yamaguchi S, Ogura T, Mochizuki M, Kang J, Tateno M, Shinzawa-Itoh K, Kato K, Yoshikawa S., J Biol Chem 288(42), 2013
PMID: 23996000
Kubo M, Nakashima S, Yamaguchi S, Ogura T, Mochizuki M, Kang J, Tateno M, Shinzawa-Itoh K, Kato K, Yoshikawa S., J Biol Chem 288(42), 2013
PMID: 23996000
Voltage dependence of proton pumping by bacteriorhodopsin mutants with altered lifetime of the M intermediate.
Geibel S, Lörinczi É, Bamberg E, Friedrich T., PLoS One 8(9), 2013
PMID: 24019918
Geibel S, Lörinczi É, Bamberg E, Friedrich T., PLoS One 8(9), 2013
PMID: 24019918
IR and X-ray time-resolved simultaneous experiments: an opportunity to investigate the dynamics of complex systems and non-equilibrium phenomena using third-generation synchrotron radiation sources.
Marcelli A, Innocenzi P, Malfatti L, Newton MA, Rau JV, Ritter E, Schade U, Xu W., J Synchrotron Radiat 19(pt 6), 2012
PMID: 23093747
Marcelli A, Innocenzi P, Malfatti L, Newton MA, Rau JV, Ritter E, Schade U, Xu W., J Synchrotron Radiat 19(pt 6), 2012
PMID: 23093747
Implementation of time-resolved step-scan fourier transform infrared (FT-IR) spectroscopy using a kHz repetition rate pump laser.
Magana D, Parul D, Dyer RB, Shreve AP., Appl Spectrosc 65(5), 2011
PMID: 21513597
Magana D, Parul D, Dyer RB, Shreve AP., Appl Spectrosc 65(5), 2011
PMID: 21513597
The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156.
Nack M, Radu I, Gossing M, Bamann C, Bamberg E, von Mollard GF, Heberle J., Photochem Photobiol Sci 9(2), 2010
PMID: 20126794
Nack M, Radu I, Gossing M, Bamann C, Bamberg E, von Mollard GF, Heberle J., Photochem Photobiol Sci 9(2), 2010
PMID: 20126794
Signal relay from sensory rhodopsin I to the cognate transducer HtrI: assessing the critical change in hydrogen-bonding between Tyr-210 and Asn-53.
Radu I, Budyak IL, Hoomann T, Kim YJ, Engelhard M, Labahn J, Büldt G, Heberle J, Schlesinger R., Biophys Chem 150(1-3), 2010
PMID: 20303644
Radu I, Budyak IL, Hoomann T, Kim YJ, Engelhard M, Labahn J, Büldt G, Heberle J, Schlesinger R., Biophys Chem 150(1-3), 2010
PMID: 20303644
Thinner, smaller, faster: IR techniques to probe the functionality of biological and biomimetic systems.
Ataka K, Kottke T, Heberle J., Angew Chem Int Ed Engl 49(32), 2010
PMID: 20818765
Ataka K, Kottke T, Heberle J., Angew Chem Int Ed Engl 49(32), 2010
PMID: 20818765
89 References
Daten bereitgestellt von Europe PubMed Central.
Manning, Rev. Sci. Instrum. 62(), 1991
Uhmann, Appl. Spectrosc. 45(), 1991
Chen, Appl. Spectrosc. 51(), 1997
Rammelsberg, Appl. Spectrosc. 51(), 1997
Perfusion-induced redox differences in cytochrome c oxidase: ATR/FT-IR spectroscopy.
Nyquist RM, Heitbrink D, Bolwien C, Wells TA, Gennis RB, Heberle J., FEBS Lett. 505(1), 2001
PMID: 11557043
Nyquist RM, Heitbrink D, Bolwien C, Wells TA, Gennis RB, Heberle J., FEBS Lett. 505(1), 2001
PMID: 11557043
Heberle, Appl. Spectrosc. 50(), 1996
Osawa, J. Electron Spectrosc. Relat. Phenom. 64–65(), 1993
Surface-enhanced infrared spectroscopy.
Aroca RF, Ross DJ, Domingo C., Appl Spectrosc 58(11), 2004
PMID: 15606928
Aroca RF, Ross DJ, Domingo C., Appl Spectrosc 58(11), 2004
PMID: 15606928
Oriented attachment and membrane reconstitution of His-tagged cytochrome c oxidase to a gold electrode: in situ monitoring by surface-enhanced infrared absorption spectroscopy.
Ataka K, Giess F, Knoll W, Naumann R, Haber-Pohlmeier S, Richter B, Heberle J., J. Am. Chem. Soc. 126(49), 2004
PMID: 15584756
Ataka K, Giess F, Knoll W, Naumann R, Haber-Pohlmeier S, Richter B, Heberle J., J. Am. Chem. Soc. 126(49), 2004
PMID: 15584756
Electrochemically induced surface-enhanced infrared difference absorption (SEIDA) spectroscopy of a protein monolayer.
Ataka K, Heberle J., J. Am. Chem. Soc. 125(17), 2003
PMID: 12708842
Ataka K, Heberle J., J. Am. Chem. Soc. 125(17), 2003
PMID: 12708842
Crystallisation of membrane proteins mediated by antibody fragments.
Hunte C, Michel H., Curr. Opin. Struct. Biol. 12(4), 2002
PMID: 12163074
Hunte C, Michel H., Curr. Opin. Struct. Biol. 12(4), 2002
PMID: 12163074
Crystallization of membrane proteins.
Ostermeier C, Michel H., Curr. Opin. Struct. Biol. 7(5), 1997
PMID: 9345629
Ostermeier C, Michel H., Curr. Opin. Struct. Biol. 7(5), 1997
PMID: 9345629
Crystallization of membrane proteins in cubo.
Nollert P, Navarro J, Landau EM., Meth. Enzymol. 343(), 2002
PMID: 11665567
Nollert P, Navarro J, Landau EM., Meth. Enzymol. 343(), 2002
PMID: 11665567
Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.
Lozier RH, Bogomolni RA, Stoeckenius W., Biophys. J. 15(9), 1975
PMID: 1182271
Lozier RH, Bogomolni RA, Stoeckenius W., Biophys. J. 15(9), 1975
PMID: 1182271
Spectrally silent transitions in the bacteriorhodopsin photocycle.
Chizhov I, Chernavskii DS, Engelhard M, Mueller KH, Zubov BV, Hess B., Biophys. J. 71(5), 1996
PMID: 8913574
Chizhov I, Chernavskii DS, Engelhard M, Mueller KH, Zubov BV, Hess B., Biophys. J. 71(5), 1996
PMID: 8913574
Weidlich, Appl. Spectrosc. 47(), 1993
Time-resolved step-scan Fourier transform infrared spectroscopy reveals differences between early and late M intermediates of bacteriorhodopsin.
Rodig C, Chizhov I, Weidlich O, Siebert F., Biophys. J. 76(5), 1999
PMID: 10233083
Rodig C, Chizhov I, Weidlich O, Siebert F., Biophys. J. 76(5), 1999
PMID: 10233083
Hage, J. Phys. Chem. 100(), 1996
Nanosecond time-resolved infrared spectroscopy distinguishes two K species in the bacteriorhodopsin photocycle.
Sasaki J, Yuzawa T, Kandori H, Maeda A, Hamaguchi H., Biophys. J. 68(5), 1995
PMID: 7612850
Sasaki J, Yuzawa T, Kandori H, Maeda A, Hamaguchi H., Biophys. J. 68(5), 1995
PMID: 7612850
Dioumaev, J. Phys. Chem. B 101(), 1997
Zscherp, J. Phys. Chem. B 101(), 1997
Light-driven protonation changes of internal aspartic acids of bacteriorhodopsin: an investigation by static and time-resolved infrared difference spectroscopy using [4-13C]aspartic acid labeled purple membrane.
Engelhard M, Gerwert K, Hess B, Kreutz W, Siebert F., Biochemistry 24(2), 1985
PMID: 3978081
Engelhard M, Gerwert K, Hess B, Kreutz W, Siebert F., Biochemistry 24(2), 1985
PMID: 3978081
Maeda, Isr. J. Chem. 35(), 1995
Bacteriorhodopsin: the functional details of a molecular machine are being resolved
Heberle J, Fitter J, Sass HJ, Buldt G., Biophys. Chem. 85(2-3), 2000
PMID: 10961509
Heberle J, Fitter J, Sass HJ, Buldt G., Biophys. Chem. 85(2-3), 2000
PMID: 10961509
Heberle, Biochim. Biophys. Acta, Bioenerg. 1458(), 2000
Dioumaev, Biochemistry (Moscow) 66(), 2001
The assignment of the different infrared continuum absorbance changes observed in the 3000-1800-cm(-1) region during the bacteriorhodopsin photocycle.
Garczarek F, Wang J, El-Sayed MA, Gerwert K., Biophys. J. 87(4), 2004
PMID: 15298873
Garczarek F, Wang J, El-Sayed MA, Gerwert K., Biophys. J. 87(4), 2004
PMID: 15298873
Functional waters in intraprotein proton transfer monitored by FTIR difference spectroscopy.
Garczarek F, Gerwert K., Nature 439(7072), 2005
PMID: 16280982
Garczarek F, Gerwert K., Nature 439(7072), 2005
PMID: 16280982
Bacteriorhodopsin's intramolecular proton-release pathway consists of a hydrogen-bonded network.
Rammelsberg R, Huhn G, Lubben M, Gerwert K., Biochemistry 37(14), 1998
PMID: 9538019
Rammelsberg R, Huhn G, Lubben M, Gerwert K., Biochemistry 37(14), 1998
PMID: 9538019
A local area network of protonated water molecules.
Heberle J., Biophys. J. 87(4), 2004
PMID: 15315946
Heberle J., Biophys. J. 87(4), 2004
PMID: 15315946
Structures and spectral signatures of protonated water networks in bacteriorhodopsin.
Mathias G, Marx D., Proc. Natl. Acad. Sci. U.S.A. 104(17), 2007
PMID: 17438299
Mathias G, Marx D., Proc. Natl. Acad. Sci. U.S.A. 104(17), 2007
PMID: 17438299
Breton, Photosynth. Res. 55(), 1998
Water structural changes in the L and M photocycle intermediates of bacteriorhodopsin as revealed by time-resolved step-scan Fourier transform infrared (FTIR) spectroscopy.
Morgan JE, Vakkasoglu AS, Gennis RB, Maeda A., Biochemistry 46(10), 2007
PMID: 17300175
Morgan JE, Vakkasoglu AS, Gennis RB, Maeda A., Biochemistry 46(10), 2007
PMID: 17300175
Structural changes due to the deprotonation of the proton release group in the M-photointermediate of bacteriorhodopsin as revealed by time-resolved FTIR spectroscopy.
Morgan JE, Vakkasoglu AS, Lugtenburg J, Gennis RB, Maeda A., Biochemistry 47(44), 2008
PMID: 18837559
Morgan JE, Vakkasoglu AS, Lugtenburg J, Gennis RB, Maeda A., Biochemistry 47(44), 2008
PMID: 18837559
Spectroscopic and kinetic evidence on how bacteriorhodopsin accomplishes vectorial proton transport under functional conditions.
Lorenz-Fonfria VA, Kandori H., J. Am. Chem. Soc. 131(16), 2009
PMID: 19348432
Lorenz-Fonfria VA, Kandori H., J. Am. Chem. Soc. 131(16), 2009
PMID: 19348432
In situ determination of transient pKa changes of internal amino acids of bacteriorhodopsin by using time-resolved attenuated total reflection Fourier-transform infrared spectroscopy.
Zscherp C, Schlesinger R, Tittor J, Oesterhelt D, Heberle J., Proc. Natl. Acad. Sci. U.S.A. 96(10), 1999
PMID: 10318912
Zscherp C, Schlesinger R, Tittor J, Oesterhelt D, Heberle J., Proc. Natl. Acad. Sci. U.S.A. 96(10), 1999
PMID: 10318912
D38 is an essential part of the proton translocation pathway in bacteriorhodopsin.
Riesle J, Oesterhelt D, Dencher NA, Heberle J., Biochemistry 35(21), 1996
PMID: 8639612
Riesle J, Oesterhelt D, Dencher NA, Heberle J., Biochemistry 35(21), 1996
PMID: 8639612
Structure of bacteriorhodopsin at 1.55 A resolution.
Luecke H, Schobert B, Richter HT, Cartailler JP, Lanyi JK., J. Mol. Biol. 291(4), 1999
PMID: 10452895
Luecke H, Schobert B, Richter HT, Cartailler JP, Lanyi JK., J. Mol. Biol. 291(4), 1999
PMID: 10452895
Assessing the functionality of a membrane protein in a three-dimensional crystal.
Heberle J, Buldt G, Koglin E, Rosenbusch JP, Landau EM., J. Mol. Biol. 281(4), 1998
PMID: 9710532
Heberle J, Buldt G, Koglin E, Rosenbusch JP, Landau EM., J. Mol. Biol. 281(4), 1998
PMID: 9710532
Time-resolved microspectroscopy on a single crystal of bacteriorhodopsin reveals lattice-induced differences in the photocycle kinetics.
Efremov R, Gordeliy VI, Heberle J, Buldt G., Biophys. J. 91(4), 2006
PMID: 16731567
Efremov R, Gordeliy VI, Heberle J, Buldt G., Biophys. J. 91(4), 2006
PMID: 16731567
Blue halorhodopsin from Natronobacterium pharaonis: wavelength regulation by anions.
Scharf B, Engelhard M., Biochemistry 33(21), 1994
PMID: 8204571
Scharf B, Engelhard M., Biochemistry 33(21), 1994
PMID: 8204571
Proton transport by halorhodopsin.
Varo G, Brown LS, Needleman R, Lanyi JK., Biochemistry 35(21), 1996
PMID: 8639608
Varo G, Brown LS, Needleman R, Lanyi JK., Biochemistry 35(21), 1996
PMID: 8639608
Chromophore-anion interactions in halorhodopsin from Natronobacterium pharaonis probed by time-resolved resonance Raman spectroscopy.
Gerscher S, Mylrajan M, Hildebrandt P, Baron MH, Muller R, Engelhard M., Biochemistry 36(36), 1997
PMID: 9283093
Gerscher S, Mylrajan M, Hildebrandt P, Baron MH, Muller R, Engelhard M., Biochemistry 36(36), 1997
PMID: 9283093
Flash-induced voltage changes in halorhodopsin from Natronobacterium pharaonis.
Kalaidzidis IV, Kalaidzidis YL, Kaulen AD., FEBS Lett. 427(1), 1998
PMID: 9613600
Kalaidzidis IV, Kalaidzidis YL, Kaulen AD., FEBS Lett. 427(1), 1998
PMID: 9613600
Structure of the light-driven chloride pump halorhodopsin at 1.8 A resolution.
Kolbe M, Besir H, Essen LO, Oesterhelt D., Science 288(5470), 2000
PMID: 10827943
Kolbe M, Besir H, Essen LO, Oesterhelt D., Science 288(5470), 2000
PMID: 10827943
Nano- and microsecond time-resolved FTIR spectroscopy of the halorhodopsin photocycle.
Dioumaev AK, Braiman MS., Photochem. Photobiol. 66(6), 1997
PMID: 9421962
Dioumaev AK, Braiman MS., Photochem. Photobiol. 66(6), 1997
PMID: 9421962
Halide dependence of the halorhodopsin photocycle as measured by time-resolved infrared spectra.
Hutson MS, Shilov SV, Krebs R, Braiman MS., Biophys. J. 80(3), 2001
PMID: 11222305
Hutson MS, Shilov SV, Krebs R, Braiman MS., Biophys. J. 80(3), 2001
PMID: 11222305
Differences between the photocycles of halorhodopsin and the acid purple form of bacteriorhodopsin analyzed with millisecond time-resolved FTIR spectroscopy.
Mitrovich QM, Victor KG, Braiman MS., Biophys. Chem. 56(1-2), 1995
PMID: 7662860
Mitrovich QM, Victor KG, Braiman MS., Biophys. Chem. 56(1-2), 1995
PMID: 7662860
Static and time-resolved step-scan Fourier transform infrared investigations of the photoreaction of halorhodopsin from Natronobacterium pharaonis: consequences for models of the anion translocation mechanism.
Hackmann C, Guijarro J, Chizhov I, Engelhard M, Rodig C, Siebert F., Biophys. J. 81(1), 2001
PMID: 11423423
Hackmann C, Guijarro J, Chizhov I, Engelhard M, Rodig C, Siebert F., Biophys. J. 81(1), 2001
PMID: 11423423
X-ray structure of sensory rhodopsin II at 2.1-A resolution.
Royant A, Nollert P, Edman K, Neutze R, Landau EM, Pebay-Peyroula E, Navarro J., Proc. Natl. Acad. Sci. U.S.A. 98(18), 2001
PMID: 11504917
Royant A, Nollert P, Edman K, Neutze R, Landau EM, Pebay-Peyroula E, Navarro J., Proc. Natl. Acad. Sci. U.S.A. 98(18), 2001
PMID: 11504917
Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction.
Luecke H, Schobert B, Lanyi JK, Spudich EN, Spudich JL., Science 293(5534), 2001
PMID: 11452084
Luecke H, Schobert B, Lanyi JK, Spudich EN, Spudich JL., Science 293(5534), 2001
PMID: 11452084
Time-resolved FTIR studies of sensory rhodopsin II (NpSRII) from Natronobacterium pharaonis: implications for proton transport and receptor activation.
Hein M, Wegener AA, Engelhard M, Siebert F., Biophys. J. 84(2 Pt 1), 2003
PMID: 12547800
Hein M, Wegener AA, Engelhard M, Siebert F., Biophys. J. 84(2 Pt 1), 2003
PMID: 12547800
Retinylidene proteins: structures and functions from archaea to humans.
Spudich JL, Yang CS, Jung KH, Spudich EN., Annu. Rev. Cell Dev. Biol. 16(), 2000
PMID: 11031241
Spudich JL, Yang CS, Jung KH, Spudich EN., Annu. Rev. Cell Dev. Biol. 16(), 2000
PMID: 11031241
Microbial rhodopsins: scaffolds for ion pumps, channels, and sensors.
Klare JP, Chizhov I, Engelhard M., Results Probl Cell Differ 45(), 2008
PMID: 17898961
Klare JP, Chizhov I, Engelhard M., Results Probl Cell Differ 45(), 2008
PMID: 17898961
Proteorhodopsin is a light-driven proton pump with variable vectoriality.
Friedrich T, Geibel S, Kalmbach R, Chizhov I, Ataka K, Heberle J, Engelhard M, Bamberg E., J. Mol. Biol. 321(5), 2002
PMID: 12206764
Friedrich T, Geibel S, Kalmbach R, Chizhov I, Ataka K, Heberle J, Engelhard M, Bamberg E., J. Mol. Biol. 321(5), 2002
PMID: 12206764
Light-induced structural changes in photosynthetic reaction center: implications for mechanism of electron-proton transfer.
Stowell MH, McPhillips TM, Rees DC, Soltis SM, Abresch E, Feher G., Science 276(5313), 1997
PMID: 9115209
Stowell MH, McPhillips TM, Rees DC, Soltis SM, Abresch E, Feher G., Science 276(5313), 1997
PMID: 9115209
Time-resolved infrared spectroscopy of electron transfer in bacterial photosynthetic reaction centers: dynamics of binding and interaction upon QA and QB reduction.
Hienerwadel R, Thibodeau D, Lenz F, Nabedryk E, Breton J, Kreutz W, Mantele W., Biochemistry 31(25), 1992
PMID: 1610825
Hienerwadel R, Thibodeau D, Lenz F, Nabedryk E, Breton J, Kreutz W, Mantele W., Biochemistry 31(25), 1992
PMID: 1610825
Protonation of Glu L212 following QB- formation in the photosynthetic reaction center of Rhodobacter sphaeroides: evidence from time-resolved infrared spectroscopy.
Hienerwadel R, Grzybek S, Fogel C, Kreutz W, Okamura MY, Paddock ML, Breton J, Nabedryk E, Mantele W., Biochemistry 34(9), 1995
PMID: 7893696
Hienerwadel R, Grzybek S, Fogel C, Kreutz W, Okamura MY, Paddock ML, Breton J, Nabedryk E, Mantele W., Biochemistry 34(9), 1995
PMID: 7893696
Burie, Appl. Spectrosc. 47(), 1993
Time-resolved step-scan FTIR investigation on the primary donor of the reaction center from the green sulfur bacterium Chlorobium tepidum.
Mezzetti A, Seo D, Leibl W, Sakurai H, Breton J., Photosyn. Res. 75(2), 2003
PMID: 16245086
Mezzetti A, Seo D, Leibl W, Sakurai H, Breton J., Photosyn. Res. 75(2), 2003
PMID: 16245086
Coupling of light-induced electron transfer to proton uptake in photosynthesis.
Remy A, Gerwert K., Nat. Struct. Biol. 10(8), 2003
PMID: 12872158
Remy A, Gerwert K., Nat. Struct. Biol. 10(8), 2003
PMID: 12872158
Proton uptake in the reaction center mutant L210DN from Rhodobacter sphaeroides via protonated water molecules.
Hermes S, Stachnik JM, Onidas D, Remy A, Hofmann E, Gerwert K., Biochemistry 45(46), 2006
PMID: 17105193
Hermes S, Stachnik JM, Onidas D, Remy A, Hofmann E, Gerwert K., Biochemistry 45(46), 2006
PMID: 17105193
The reaction of the electrostatic cytochrome c-cytochrome oxidase complex with oxygen.
Hill BC., J. Biol. Chem. 266(4), 1991
PMID: 1846619
Hill BC., J. Biol. Chem. 266(4), 1991
PMID: 1846619
Substitution of asparagine for aspartate-135 in subunit I of the cytochrome bo ubiquinol oxidase of Escherichia coli eliminates proton-pumping activity.
Thomas JW, Puustinen A, Alben JO, Gennis RB, Wikstrom M., Biochemistry 32(40), 1993
PMID: 8399242
Thomas JW, Puustinen A, Alben JO, Gennis RB, Wikstrom M., Biochemistry 32(40), 1993
PMID: 8399242
Proton transfer in cytochrome bo3 ubiquinol oxidase of Escherichia coli: second-site mutations in subunit I that restore proton pumping in the mutant Asp135-->Asn.
Garcia-Horsman JA, Puustinen A, Gennis RB, Wikstrom M., Biochemistry 34(13), 1995
PMID: 7703256
Garcia-Horsman JA, Puustinen A, Gennis RB, Wikstrom M., Biochemistry 34(13), 1995
PMID: 7703256
The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.
Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzawa-Itoh K, Nakashima R, Yaono R, Yoshikawa S., Science 272(5265), 1996
PMID: 8638158
Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzawa-Itoh K, Nakashima R, Yaono R, Yoshikawa S., Science 272(5265), 1996
PMID: 8638158
Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.
Iwata S, Ostermeier C, Ludwig B, Michel H., Nature 376(6542), 1995
PMID: 7651515
Iwata S, Ostermeier C, Ludwig B, Michel H., Nature 376(6542), 1995
PMID: 7651515
The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides.
Svensson-Ek M, Abramson J, Larsson G, Tornroth S, Brzezinski P, Iwata S., J. Mol. Biol. 321(2), 2002
PMID: 12144789
Svensson-Ek M, Abramson J, Larsson G, Tornroth S, Brzezinski P, Iwata S., J. Mol. Biol. 321(2), 2002
PMID: 12144789
The proton donor for O-O bond scission by cytochrome c oxidase.
Gorbikova EA, Belevich I, Wikstrom M, Verkhovsky MI., Proc. Natl. Acad. Sci. U.S.A. 105(31), 2008
PMID: 18664577
Gorbikova EA, Belevich I, Wikstrom M, Verkhovsky MI., Proc. Natl. Acad. Sci. U.S.A. 105(31), 2008
PMID: 18664577
Direct observation of protonation reactions during the catalytic cycle of cytochrome c oxidase.
Nyquist RM, Heitbrink D, Bolwien C, Gennis RB, Heberle J., Proc. Natl. Acad. Sci. U.S.A. 100(15), 2003
PMID: 12851460
Nyquist RM, Heitbrink D, Bolwien C, Gennis RB, Heberle J., Proc. Natl. Acad. Sci. U.S.A. 100(15), 2003
PMID: 12851460
Dynamic interactions of CO with a3Fe and CuB in cytochrome c oxidase in beef heart mitochondria studied by Fourier transform infrared spectroscopy at low temperatures.
Fiamingo FG, Altschuld RA, Moh PP, Alben JO., J. Biol. Chem. 257(4), 1982
PMID: 6276395
Fiamingo FG, Altschuld RA, Moh PP, Alben JO., J. Biol. Chem. 257(4), 1982
PMID: 6276395
Alpha and beta forms of cytochrome c oxidase observed in rat heart myocytes by low temperature Fourier transform infrared spectroscopy.
Fiamingo FG, Altschuld RA, Alben JO., J. Biol. Chem. 261(28), 1986
PMID: 3020018
Fiamingo FG, Altschuld RA, Alben JO., J. Biol. Chem. 261(28), 1986
PMID: 3020018
Dyer, J. Am. Chem. Soc. 111(), 1989
Photodissociation and recombination of carbonmonoxy cytochrome oxidase: dynamics from picoseconds to kiloseconds.
Einarsdottir O, Dyer RB, Lemon DD, Killough PM, Hubig SM, Atherton SJ, Lopez-Garriga JJ, Palmer G, Woodruff WH., Biochemistry 32(45), 1993
PMID: 8218278
Einarsdottir O, Dyer RB, Lemon DD, Killough PM, Hubig SM, Atherton SJ, Lopez-Garriga JJ, Palmer G, Woodruff WH., Biochemistry 32(45), 1993
PMID: 8218278
Transient binding of CO to Cu(B) in cytochrome c oxidase is dynamically linked to structural changes around a carboxyl group: a time-resolved step-scan Fourier transform infrared investigation.
Heitbrink D, Sigurdson H, Bolwien C, Brzezinski P, Heberle J., Biophys. J. 82(1 Pt 1), 2002
PMID: 11751290
Heitbrink D, Sigurdson H, Bolwien C, Brzezinski P, Heberle J., Biophys. J. 82(1 Pt 1), 2002
PMID: 11751290
Observation of the equilibrium CuB-CO complex and functional implications of the transient heme a3 propionates in cytochrome ba3-CO from Thermus thermophilus. Fourier transform infrared (FTIR) and time-resolved step-scan FTIR studies.
Koutsoupakis K, Stavrakis S, Pinakoulaki E, Soulimane T, Varotsis C., J. Biol. Chem. 277(36), 2002
PMID: 12097331
Koutsoupakis K, Stavrakis S, Pinakoulaki E, Soulimane T, Varotsis C., J. Biol. Chem. 277(36), 2002
PMID: 12097331
Probing the Q-proton pathway of ba3-cytochrome c oxidase by time-resolved Fourier transform infrared spectroscopy.
Koutsoupakis C, Soulimane T, Varotsis C., Biophys. J. 86(4), 2004
PMID: 15041681
Koutsoupakis C, Soulimane T, Varotsis C., Biophys. J. 86(4), 2004
PMID: 15041681
Structure and mechanism of the aberrant ba(3)-cytochrome c oxidase from thermus thermophilus.
Soulimane T, Buse G, Bourenkov GP, Bartunik HD, Huber R, Than ME., EMBO J. 19(8), 2000
PMID: 10775261
Soulimane T, Buse G, Bourenkov GP, Bartunik HD, Huber R, Than ME., EMBO J. 19(8), 2000
PMID: 10775261
Ligand binding in a docking site of cytochrome C oxidase: a time-resolved step-scan Fourier transform infrared study.
Koutsoupakis C, Soulimane T, Varotsis C., J. Am. Chem. Soc. 125(48), 2003
PMID: 14640647
Koutsoupakis C, Soulimane T, Varotsis C., J. Am. Chem. Soc. 125(48), 2003
PMID: 14640647
Decay of the transient Cu(B)-CO complex is accompanied by formation of the heme Fe-CO complex of cytochrome cbb(3)-CO at ambient temperature: evidence from time-resolved Fourier transform infrared spectroscopy.
Stavrakis S, Koutsoupakis K, Pinakoulaki E, Urbani A, Saraste M, Varotsis C., J. Am. Chem. Soc. 124(15), 2002
PMID: 11942802
Stavrakis S, Koutsoupakis K, Pinakoulaki E, Urbani A, Saraste M, Varotsis C., J. Am. Chem. Soc. 124(15), 2002
PMID: 11942802
Internal electron transfer in cytochrome c oxidase: evidence for a rapid equilibrium between cytochrome a and the bimetallic site.
Oliveberg M, Malmstrom BG., Biochemistry 30(29), 1991
PMID: 1649622
Oliveberg M, Malmstrom BG., Biochemistry 30(29), 1991
PMID: 1649622
Internal electron transfer in cytochrome c oxidase is coupled to the protonation of a group close to the bimetallic site.
Hallen S, Brzezinski P, Malmstrom BG., Biochemistry 33(6), 1994
PMID: 8312266
Hallen S, Brzezinski P, Malmstrom BG., Biochemistry 33(6), 1994
PMID: 8312266
Internal electron transfer in cytochrome c oxidase from Rhodobacter sphaeroides.
Adelroth P, Brzezinski P, Malmstrom BG., Biochemistry 34(9), 1995
PMID: 7893697
Adelroth P, Brzezinski P, Malmstrom BG., Biochemistry 34(9), 1995
PMID: 7893697
Time-resolved FT-IR studies on the CO adduct of Paracoccus denitrificans cytochrome c oxidase: comparison of the fully reduced and the mixed valence form.
Rost B, Behr J, Hellwig P, Richter OM, Ludwig B, Michel H, Mantele W., Biochemistry 38(23), 1999
PMID: 10360954
Rost B, Behr J, Hellwig P, Richter OM, Ludwig B, Michel H, Mantele W., Biochemistry 38(23), 1999
PMID: 10360954
Time-resolved ATR-FTIR spectroscopy of the oxygen reaction in the D124N mutant of cytochrome c oxidase from Paracoccus denitrificans.
Gorbikova EA, Belevich NP, Wikstrom M, Verkhovsky MI., Biochemistry 46(45), 2007
PMID: 17949011
Gorbikova EA, Belevich NP, Wikstrom M, Verkhovsky MI., Biochemistry 46(45), 2007
PMID: 17949011
Dyer, Acc. Chem. Res. 31(), 1998
Time-resolved infrared study of the helix-coil transition using (13)C-labeled helical peptides.
Huang CY, Getahun Z, Wang T, DeGrado WF, Gai F., J. Am. Chem. Soc. 123(48), 2001
PMID: 11724630
Huang CY, Getahun Z, Wang T, DeGrado WF, Gai F., J. Am. Chem. Soc. 123(48), 2001
PMID: 11724630
Two-dimensional infrared spectroscopy of peptides by phase-controlled femtosecond vibrational photon echoes.
Asplund MC, Zanni MT, Hochstrasser RM., Proc. Natl. Acad. Sci. U.S.A. 97(15), 2000
PMID: 10890905
Asplund MC, Zanni MT, Hochstrasser RM., Proc. Natl. Acad. Sci. U.S.A. 97(15), 2000
PMID: 10890905
Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman.
Kukura P, McCamant DW, Yoon S, Wandschneider DB, Mathies RA., Science 310(5750), 2005
PMID: 16284176
Kukura P, McCamant DW, Yoon S, Wandschneider DB, Mathies RA., Science 310(5750), 2005
PMID: 16284176
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