The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156

Nack M, Radu I, Gossing M, Bamann C, Bamberg E, Fischer von Mollard G, Heberle J (2010)
Photochemical & Photobiological Sciences 9(2): 194-198.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Nack, Melanie; Radu, Ionela; Gossing, MichaelUniBi; Bamann, Christian; Bamberg, Ernst; Fischer von Mollard, GabrieleUniBi ; Heberle, Joachim
Einrichtung
SFB 613 Physik von Einzelmolekülprozessen/mol.Erkennung in organ.Sys.
Fakultät für Chemie > Biochemie III
Centrum für Biotechnologie > Arbeitsgruppe G. Fischer von Mollard
Centrum für Biotechnologie > Institut für Biochemie und Biotechnik
Fakultät für Chemie > Physikalische und Biophysikalische Chemie
Erscheinungsjahr
2010
Zeitschriftentitel
Photochemical & Photobiological Sciences
Band
9
Ausgabe
2
Seite(n)
194-198
ISSN
1474-905X
eISSN
1474-9092
Page URI
https://pub.uni-bielefeld.de/record/1588626

Zitieren

Nack M, Radu I, Gossing M, et al. The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156. Photochemical & Photobiological Sciences. 2010;9(2):194-198.
Nack, M., Radu, I., Gossing, M., Bamann, C., Bamberg, E., Fischer von Mollard, G., & Heberle, J. (2010). The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156. Photochemical & Photobiological Sciences, 9(2), 194-198. https://doi.org/10.1039/b9pp00157c
Nack, Melanie, Radu, Ionela, Gossing, Michael, Bamann, Christian, Bamberg, Ernst, Fischer von Mollard, Gabriele, and Heberle, Joachim. 2010. “The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156”. Photochemical & Photobiological Sciences 9 (2): 194-198.
Nack, M., Radu, I., Gossing, M., Bamann, C., Bamberg, E., Fischer von Mollard, G., and Heberle, J. (2010). The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156. Photochemical & Photobiological Sciences 9, 194-198.
Nack, M., et al., 2010. The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156. Photochemical & Photobiological Sciences, 9(2), p 194-198.
M. Nack, et al., “The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156”, Photochemical & Photobiological Sciences, vol. 9, 2010, pp. 194-198.
Nack, M., Radu, I., Gossing, M., Bamann, C., Bamberg, E., Fischer von Mollard, G., Heberle, J.: The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156. Photochemical & Photobiological Sciences. 9, 194-198 (2010).
Nack, Melanie, Radu, Ionela, Gossing, Michael, Bamann, Christian, Bamberg, Ernst, Fischer von Mollard, Gabriele, and Heberle, Joachim. “The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156”. Photochemical & Photobiological Sciences 9.2 (2010): 194-198.

34 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Retinal isomerization and water-pore formation in channelrhodopsin-2.
Ardevol A, Hummer G., Proc Natl Acad Sci U S A 115(14), 2018
PMID: 29555736
Photocycle of Sensory Rhodopsin II from Halobacterium salinarum (HsSRII): Mutation of D103 Accelerates M Decay and Changes the Decay Pathway of a 13-cis O-like Species.
Dai G, Geng X, Chaoluomeng, Tamogami J, Kikukawa T, Demura M, Kamo N, Iwasa T., Photochem Photobiol 94(4), 2018
PMID: 29512821
Extending the Time Domain of Neuronal Silencing with Cryptophyte Anion Channelrhodopsins.
Govorunova EG, Sineshchekov OA, Hemmati R, Janz R, Morelle O, Melkonian M, Wong GK, Spudich JL., eNeuro 5(3), 2018
PMID: 30027111
Mechanism by which water and protein electrostatic interactions control proton transfer at the active site of channelrhodopsin.
Adam S, Bondar AN., PLoS One 13(8), 2018
PMID: 30086158
An Atomistic Model of a Precursor State of Light-Induced Channel Opening of Channelrhodopsin.
Cheng C, Kamiya M, Takemoto M, Ishitani R, Nureki O, Yoshida N, Hayashi S., Biophys J 115(7), 2018
PMID: 30236783
Mutational analysis of the conserved carboxylates of anion channelrhodopsin-2 (ACR2) expressed in Escherichia coli and their roles in anion transport.
Kojima K, Watanabe HC, Doi S, Miyoshi N, Kato M, Ishikita H, Sudo Y., Biophys Physicobiol 15(), 2018
PMID: 30349802
Atomistic Study of Intramolecular Interactions in the Closed-State Channelrhodopsin Chimera, C1C2.
VanGordon MR, Gyawali G, Rick SW, Rempe SB., Biophys J 112(5), 2017
PMID: 28297653
Microbial Rhodopsins: Diversity, Mechanisms, and Optogenetic Applications.
Govorunova EG, Sineshchekov OA, Li H, Spudich JL., Annu Rev Biochem 86(), 2017
PMID: 28301742
Molecular properties of a DTD channelrhodopsin from Guillardia theta.
Yamauchi Y, Konno M, Ito S, Tsunoda SP, Inoue K, Kandori H., Biophys Physicobiol 14(), 2017
PMID: 28630812
Structural insights into ion conduction by channelrhodopsin 2.
Volkov O, Kovalev K, Polovinkin V, Borshchevskiy V, Bamann C, Astashkin R, Marin E, Popov A, Balandin T, Willbold D, Büldt G, Bamberg E, Gordeliy V., Science 358(6366), 2017
PMID: 29170206
Photochemical reaction cycle transitions during anion channelrhodopsin gating.
Sineshchekov OA, Li H, Govorunova EG, Spudich JL., Proc Natl Acad Sci U S A 113(14), 2016
PMID: 27001860
Light and pH-induced Changes in Structure and Accessibility of Transmembrane Helix B and Its Immediate Environment in Channelrhodopsin-2.
Volz P, Krause N, Balke J, Schneider C, Walter M, Schneider F, Schlesinger R, Alexiev U., J Biol Chem 291(33), 2016
PMID: 27268055
Kinetic evaluation of photosensitivity in bi-stable variants of chimeric channelrhodopsins.
Hososhima S, Sakai S, Ishizuka T, Yawo H., PLoS One 10(3), 2015
PMID: 25789474
Chimeras of channelrhodopsin-1 and -2 from Chlamydomonas reinhardtii exhibit distinctive light-induced structural changes from channelrhodopsin-2.
Inaguma A, Tsukamoto H, Kato HE, Kimura T, Ishizuka T, Oishi S, Yawo H, Nureki O, Furutani Y., J Biol Chem 290(18), 2015
PMID: 25796616
Kinetic and vibrational isotope effects of proton transfer reactions in channelrhodopsin-2.
Resler T, Schultz BJ, Lórenz-Fonfría VA, Schlesinger R, Heberle J., Biophys J 109(2), 2015
PMID: 26200864
Temporal evolution of helix hydration in a light-gated ion channel correlates with ion conductance.
Lórenz-Fonfría VA, Bamann C, Resler T, Schlesinger R, Bamberg E, Heberle J., Proc Natl Acad Sci U S A 112(43), 2015
PMID: 26460012
Gating mechanisms of a natural anion channelrhodopsin.
Sineshchekov OA, Govorunova EG, Li H, Spudich JL., Proc Natl Acad Sci U S A 112(46), 2015
PMID: 26578767
Channelrhodopsin unchained: structure and mechanism of a light-gated cation channel.
Lórenz-Fonfría VA, Heberle J., Biochim Biophys Acta 1837(5), 2014
PMID: 24212055
Channelrhodopsins: a bioinformatics perspective.
Del Val C, Royuela-Flor J, Milenkovic S, Bondar AN., Biochim Biophys Acta 1837(5), 2014
PMID: 24252597
Coupling between inter-helical hydrogen bonding and water dynamics in a proton transporter.
del Val C, Bondar L, Bondar AN., J Struct Biol 186(1), 2014
PMID: 24576681
Changes in the hydrogen-bonding strength of internal water molecules and cysteine residues in the conductive state of channelrhodopsin-1.
Lórenz-Fonfría VA, Muders V, Schlesinger R, Heberle J., J Chem Phys 141(22), 2014
PMID: 25494778
Towards an understanding of channelrhodopsin function: simulations lead to novel insights of the channel mechanism.
Watanabe HC, Welke K, Sindhikara DJ, Hegemann P, Elstner M., J Mol Biol 425(10), 2013
PMID: 23376098
QM/MM simulations of vibrational spectra of bacteriorhodopsin and channelrhodopsin-2.
Welke K, Watanabe HC, Wolter T, Gaus M, Elstner M., Phys Chem Chem Phys 15(18), 2013
PMID: 23385325
Light-dark adaptation of channelrhodopsin C128T mutant.
Ritter E, Piwowarski P, Hegemann P, Bartl FJ., J Biol Chem 288(15), 2013
PMID: 23439646
Transient protonation changes in channelrhodopsin-2 and their relevance to channel gating.
Lórenz-Fonfría VA, Resler T, Krause N, Nack M, Gossing M, Fischer von Mollard G, Bamann C, Bamberg E, Schlesinger R, Heberle J., Proc Natl Acad Sci U S A 110(14), 2013
PMID: 23509282
Diversity of Chlamydomonas channelrhodopsins.
Hou SY, Govorunova EG, Ntefidou M, Lane CE, Spudich EN, Sineshchekov OA, Spudich JL., Photochem Photobiol 88(1), 2012
PMID: 22044280
Bioinformatic and mutational analysis of channelrhodopsin-2 protein cation-conducting pathway.
Plazzo AP, De Franceschi N, Da Broi F, Zonta F, Sanasi MF, Filippini F, Mongillo M., J Biol Chem 287(7), 2012
PMID: 22139833
Structural model of channelrhodopsin.
Watanabe HC, Welke K, Schneider F, Tsunoda S, Zhang F, Deisseroth K, Hegemann P, Elstner M., J Biol Chem 287(10), 2012
PMID: 22241469
Crystal structure of the channelrhodopsin light-gated cation channel.
Kato HE, Zhang F, Yizhar O, Ramakrishnan C, Nishizawa T, Hirata K, Ito J, Aita Y, Tsukazaki T, Hayashi S, Hegemann P, Maturana AD, Ishitani R, Deisseroth K, Nureki O., Nature 482(7385), 2012
PMID: 22266941
Kinetics of proton release and uptake by channelrhodopsin-2.
Nack M, Radu I, Schultz BJ, Resler T, Schlesinger R, Bondar AN, del Val C, Abbruzzetti S, Viappiani C, Bamann C, Bamberg E, Heberle J., FEBS Lett 586(9), 2012
PMID: 22504075
Tuning the primary reaction of channelrhodopsin-2 by imidazole, pH, and site-specific mutations.
Scholz F, Bamberg E, Bamann C, Wachtveitl J., Biophys J 102(11), 2012
PMID: 22713581
Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.
Kleinlogel S, Feldbauer K, Dempski RE, Fotis H, Wood PG, Bamann C, Bamberg E., Nat Neurosci 14(4), 2011
PMID: 21399632
New channelrhodopsin with a red-shifted spectrum and rapid kinetics from Mesostigma viride.
Govorunova EG, Spudich EN, Lane CE, Sineshchekov OA, Spudich JL., MBio 2(3), 2011
PMID: 21693637
The chromophore structure of the long-lived intermediate of the C128T channelrhodopsin-2 variant.
Bruun S, Naumann H, Kuhlmann U, Schulz C, Stehfest K, Hegemann P, Hildebrandt P., FEBS Lett 585(24), 2011
PMID: 22094167

18 References

Daten bereitgestellt von Europe PubMed Central.

A rhodopsin is the functional photoreceptor for phototaxis in the unicellular eukaryote Chlamydomonas.
Foster KW, Saranak J, Patel N, Zarilli G, Okabe M, Kline T, Nakanishi K., Nature 311(5988), 1984
PMID: 6493336
Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Nagel G, Szellas T, Huhn W, Kateriya S, Adeishvili N, Berthold P, Ollig D, Hegemann P, Bamberg E., Proc. Natl. Acad. Sci. U.S.A. 100(24), 2003
PMID: 14615590
Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardtii.
Sineshchekov OA, Jung KH, Spudich JL., Proc. Natl. Acad. Sci. U.S.A. 99(13), 2002
PMID: 12060707
New photochemical tools for controlling neuronal activity.
Kramer RH, Fortin DL, Trauner D., Curr. Opin. Neurobiol. 19(5), 2009
PMID: 19828309
Photoactivation of channelrhodopsin.
Ernst OP, Sanchez Murcia PA, Daldrop P, Tsunoda SP, Kateriya S, Hegemann P., J. Biol. Chem. 283(3), 2007
PMID: 17993465
Spectral characteristics of the photocycle of channelrhodopsin-2 and its implication for channel function.
Bamann C, Kirsch T, Nagel G, Bamberg E., J. Mol. Biol. 375(3), 2007
PMID: 18037436
Conformational changes of channelrhodopsin-2.
Radu I, Bamann C, Nack M, Nagel G, Bamberg E, Heberle J., J. Am. Chem. Soc. 131(21), 2009
PMID: 19422231
Monitoring light-induced structural changes of Channelrhodopsin-2 by UV-visible and Fourier transform infrared spectroscopy.
Ritter E, Stehfest K, Berndt A, Hegemann P, Bartl FJ., J. Biol. Chem. 283(50), 2008
PMID: 18927082
Proteins in action monitored by time-resolved FTIR spectroscopy.
Kotting C, Gerwert K., Chemphyschem 6(5), 2005
PMID: 15884070
Time-resolved methods in biophysics. 10. Time-resolved FT-IR difference spectroscopy and the application to membrane proteins.
Radu I, Schleeger M, Bolwien C, Heberle J., Photochem. Photobiol. Sci. 8(11), 2009
PMID: 19862409
Reaction-induced infrared difference spectroscopy for the study of protein function and reaction mechanisms.
Mantele W., Trends Biochem. Sci. 18(6), 1993
PMID: 8346552

Maeda, Isr. J. Chem. 35(), 1995
Early structural rearrangements in the photocycle of an integral membrane sensory receptor.
Edman K, Royant A, Nollert P, Maxwell CA, Pebay-Peyroula E, Navarro J, Neutze R, Landau EM., Structure 10(4), 2002
PMID: 11937052
The infrared absorption of amino acid side chains.
Barth A., Prog. Biophys. Mol. Biol. 74(3-5), 2000
PMID: 11226511
Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond.
Bamann C, Gueta R, Kleinlogel S, Nagel G, Bamberg E., Biochemistry 49(2), 2010
PMID: 20000562
Channelrhodopsins: directly light-gated cation channels.
Nagel G, Szellas T, Kateriya S, Adeishvili N, Hegemann P, Bamberg E., Biochem. Soc. Trans. 33(Pt 4), 2005
PMID: 16042615
The retinal structure of channelrhodopsin-2 assessed by resonance Raman spectroscopy.
Nack M, Radu I, Bamann C, Bamberg E, Heberle J., FEBS Lett. 583(22), 2009
PMID: 19854176
A vibrational spectral maker for probing the hydrogen-bonding status of protonated Asp and Glu residues.
Nie B, Stutzman J, Xie A., Biophys. J. 88(4), 2005
PMID: 15653739
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 20126794
PubMed | Europe PMC

Suchen in

Google Scholar