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3051 Publications

2018 | Journal Article | PUB-ID: 2918481
Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework
Luhmann N, Chauve C, Stoye J, Wittler R (Accepted)
IEEE/ACM Transactions on Computational Biology and Bioinformatics.
PUB | DOI
 
2018 | Journal Article | PUB-ID: 2919914
Chemicals from lignin: Recent depolymerization techniques and upgrading extended pathways
Wendisch VF, Kim Y, Lee J-H (Accepted)
Curr Op Green Sust Chem.
PUB
 
2018 | Journal Article | PUB-ID: 2918840
Synthetic Escherichia coli-Corynebacterium glutamicum consortia for L-lysine production from starch and sucrose
Sgobba E, Stumpf AK, Vortmann M, Jagmann N, Krehenbrink M, Dirks-Hofmeister ME, Moerschbacher B, Philipp B, Wendisch VF (2018)
Biores Technol 260: 302-310.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2919006
Computing the family-free DCJ similarity
Rubert DP, Hoshino EA, Dias Vieira Braga M, Stoye J, Martinez FV (2018)
BMC Bioinformatics 19(Suppl. 6): 152.
PUB | DOI
 
2018 | Journal Article | PUB-ID: 2919005
GraphTeams: a method for discovering spatial gene clusters in Hi-C sequencing data
Schulz T, Stoye J, Dörr D (2018)
BMC Genomics 19(Suppl. 5): 308.
PUB | DOI
 
2018 | Bielefeld Dissertation | PUB-ID: 2919356 PUB | PDF
 
2018 | Journal Article | PUB-ID: 2919012
Flexible metagenome analysis using the MGX framework
Jaenicke S, Albaum S, Blumenkamp P, Linke B, Stoye J, Goesmann A (2018)
Microbiome 6: 76.
PUB | DOI
 
2018 | Journal Article | PUB-ID: 2919299
Micro-organisms growing on rapeseed during storage affect the profile of volatile compounds of virgin rapeseed oil
Wagner C, Bonte A, Bruehl L, Niehaus K, Bednarz H, Matthaeus B (2018)
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 98(6): 2147-2155.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2919346
Do we treat our patients or rather periodontal microbes with adjunctive antibiotics in periodontal therapy? A 16S rDNA microbial community analysis
Hagenfeld D, Koch R, Jünemann S, Prior K, Harks I, Eickholz P, Hoffmann T, Kim T-S, Kocher T, Meyle J, Kaner D, et al. (2018)
PLOS ONE 13(4): e0195534.
PUB | DOI
 
2018 | Journal Article | PUB-ID: 2918160
Biotechnological production of mono- and diamines using bacteria: recent progress, applications and perspectives
Wendisch VF, Mindt M, Perez F (2018)
Appl Microbiol Biotechnol 102(8): 3583-3594.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2919149
Patchoulol production with metabolically engineered Corynebacterium glutamicum
Henke NA, Wichmann J, Baier T, Frohwitter J, Lauersen KJ, Risse JM, Peters-Wendisch P, Kruse O, Wendisch VF (2018)
Genes 9: 219.
PUB | DOI | PubMed | Europe PMC
 
2018 | Bielefeld Dissertation | PUB-ID: 2918485
Pan-genome Search and Storage
Holley G (2018)
Bielefeld: Universität Bielefeld.
PUB | PDF
 
2018 | Journal Article | PUB-ID: 2918205
Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing
Pechtl A, Rückert C, Maus I, Koeck DE, Trushina N, Kornberger P, Schwarz WH, Schlüter A, Liebl W, Zverlov VV (2018)
Genome Announcements 6(6): e01493-17.
PUB | DOI
 
2018 | Book (Editor) | PUB-ID: 2913920
Comparative Genomics: Methods and Protocols
Setubal JC, Stadler P, Stoye J (Eds) (2018) Methods in Molecular Biology; 1704.
New York: Springer Verlag.
PUB
 
2018 | Book Chapter | PUB-ID: 2913922
Family-Free Genome Comparison
Dörr D, Feijão P, Stoye J (2018)
In: Comparative Genomics: Methods and Protocols. Setubal JC, Stadler P, Stoye J (Eds); Methods in Molecular Biology, 1704. New York: Springer Verlag: 331-342.
PUB
 
2018 | Book Chapter | PUB-ID: 2913921
Pan-genome Storage and Analysis Techniques
Zekic T, Holley G, Stoye J (2018)
In: Comparative Genomics. Methods and Protocols. Setubal JC, Stadler P, Stoye J (Eds); Methods in Molecular Biology, 1704. New York: Springer Verlag: 29-53.
PUB
 
2018 | Journal Article | PUB-ID: 2919053
Comprehensive subcellular topologies of polypeptides in Streptomyces
Tsolis KC, Tsare E-P, Orfanoudaki G, Busche T, Kanaki K, Ramakrishnan R, Rousseau F, Schymkowitz J, Rückert C, Kalinowski J, Anne J, et al. (2018)
MICROBIAL CELL FACTORIES 17: 12.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2919058
The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry
Senges CHR, Al-Dilaimi A, Marchbank DH, Wibberg D, Winkler A, Haltli B, Nowrousian M, Kalinowski J, Kerr RG, Bandow JE (2018)
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115(10): 2490-2495.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2919065
LonB Protease Is a Novel Regulator of Carotenogenesis Controlling Degradation of Phytoene Synthase in Haloferax volcanii
Cerletti M, Paggi R, Troetschel C, Celeste Ferrari M, Guevara CR, Albaum S, Poetsch A, De Castro R (2018)
JOURNAL OF PROTEOME RESEARCH 17(3): 1158-1171.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2918969
Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin
Busche T, Novakova R, Al'Dilaimi A, Homerova D, Feckova L, Rezuchova B, Mingyar E, Csolleiova D, Bekeova C, Winkler A, Sevcikova B, et al. (2018)
Genome Announcements 6(9): e00103-18.
PUB | PDF | DOI
 

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