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77 Publications

2017 | Journal Article | PUB-ID: 2914424
Integration and virtual reality exploration of biomedical data with CmPI and VANTED
Sommer B, Schreiber F (2017)
IT-INFORMATION TECHNOLOGY 59(4): 181-190.
PUB | DOI | WoS
 
2017 | Bielefeld Dissertation | PUB-ID: 2913956
Petri-Netz-basierte Simulation biologischer Prozesse mit OpenModelica
Ochel L (2017)
Bielefeld: Universität Bielefeld.
PUB | PDF
 
2017 | Conference Paper | PUB-ID: 2913690
Bayesian Collective Markov Random Fields for Subcellular Localization Prediction of Human Proteins
Zhu L, Ester M (2017)
In: Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics - ACM-BCB '17. ACM Press.
PUB | PDF | DOI
 
2017 | Conference Abstract | PUB-ID: 2912309
KALIS – a web-based system for patient-specific risk assessment of drugs
Shoshi A (2017)
Presented at the Workshop on Computational Models in Biology and Medicine 2017, Hannover.
PUB
 
2017 | Conference Abstract | PUB-ID: 2912298
Integrative analysis of mechanism of drug action and potential impact on the disease
Shoshi A, Zolotareva O, Kleine M, Königs C, Hofestädt R (2017)
Presented at the 13th International Symposium on Integrative Bioinformatics 2017, Odense.
PUB
 
2017 | Conference Paper | PUB-ID: 2912290
KALIS – An eHealth system for biomedical risk analysis of drugs
Shoshi A, Müller U, Shoshi A, Ogultarhan V, Hofestädt R (2017)
In: Proceedings of the 11th eHealth2017 Conference. Hayn D, Schreier G (Eds); Studies in Health Technology and Informatics, 236. 128-135.
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2017 | Journal Article | PUB-ID: 2910493
The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes
Romano P, Hofestädt R, Lange M, D'Elia D (2017)
BMC BIOINFORMATICS 18: 101.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Journal Article | PUB-ID: 2909099
DaTo: an atlas of biological databases and tools
Li Q, Zhou Y, Jiao Y, Zhang Z, Bai L, Tong L, Yang X, Sommer B, Hofestädt R, Chen M (2016)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 13(4): 297.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Journal Article | PUB-ID: 2900648 PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Journal Article | PUB-ID: 2901345
From single variants to protein cascades multiscale modeling of single nucleotide variant sets in genetic disorders
Mueller SC, Sommer B, Backes C, Haas J, Meder B, Meese E, Keller A (2016)
Journal of Biological Chemistry 291(4): 1582-1590.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Journal Article | PUB-ID: 2709397
Identifying adverse drug reactions and drug-induced diseases using network-based drug mapping
Shoshi A, Ogultarhan V, Hoppe T, Kormeier B, Müller U, Hofestädt R (2015)
Journal of Bioinformatics and Computational Biology 13(1): 1540007.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Journal Article | PUB-ID: 2722420
GraphSAW: A web-based system for graphical analysis of drug interactions and side effects using pharmaceutical and molecular data
Shoshi A, Hoppe T, Kormeier B, Ogultarhan V, Hofestädt R (2015)
BMC Medical Informatics and Decision Making 15: 15.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Journal Article | PUB-ID: 2901356
Cancernet: a database for decoding multilevel molecular interactions across diverse cancer types
Meng X, Wang J, Yuan C, Li X, Zhou Y, Hofestädt R, Chen M (2015)
Oncogenesis 4: e177.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Journal Article | PUB-ID: 2788891
Good Medicine and Good Healthcare Demand Good Information (Systems)
Winter A, Hilgers R-D, Hofestädt R, Huebnert U, Knaup-Gregori P, Ose C, Schmoor C, Timmer A, Wege D (2015)
Methods of Information in Medicine 54(5): 385-387.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Journal Article | PUB-ID: 2765914
CellWhere: graphical display of interaction networks organized on subcellular localizations
Zhu L, Malatras A, Thorley M, Aghoghogbe I, Mer A, Duguez S, Butler-Browne G, Voit T, Duddy W (2015)
Nucleic Acids Research 43(W1): W571-W575.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Conference (Editor) | PUB-ID: 2709259
German/Russian Network of Computational Systems Biology- Report 2014
Hofestädt R, Shoshi A (Eds) (2014)
Medizinische Informatik und Bioinformatik.
PUB
 
2014 | Journal Article | PUB-ID: 2661812
Stereoscopic cell visualization: from mesoscopic to molecular scale
Sommer B, Bender C, Hoppe T, Gamroth C, Jelonek L (2014)
Journal of Electronic Imaging 23(1): 011007.
PUB | DOI | WoS
 
2014 | Journal Article | PUB-ID: 2705648
How to Use Information Technology to Improve Medication Safety
Winter A, Hilgers R-D, Hofestädt R, Knaup-Gregori P, Ose C, Timmer A (2014)
Methods of Information in Medicine 53(5): 333-335.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Journal Article | PUB-ID: 2685732
VANESA - A Software Application for the Visualization and Analysis of Networks in System Biology Applications
Brinkrolf C, Janowski SJ, Kormeier B, Lewinski M, Hippe K, Borck D, Hofestädt R (2014)
Journal of Integrative Bioinformatics 11(2): 239.
PUB | DOI | PubMed | Europe PMC
 
2014 | Conference Abstract | PUB-ID: 2709327
Integrative analysis of drug interactions and side effects on pharmacological and molecular level
Shoshi A, Kormeier B, Hoppe T, Hofestädt R (2014)
Presented at the NETTAB 2014: From structural bioinformatics to integrative systems biology, Turin.
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