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197 Publications

2018 | Journal Article | PUB-ID: 2915515
Novel candidate genes important for asthma and hypertension comorbidity revealed from associative gene networks
Saik OV, Demenkov PS, Ivanisenko TV, Bragina EY, Freidin MB, Goncharova IA, Dosenko VE, Zolotareva O, Hofestädt R, Lavrik IN, Rogaev EI, et al. (2018)
BMC Medical Genomics 11(1): 15.
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2017 | Conference Paper | PUB-ID: 2912290
KALIS – An eHealth system for biomedical risk analysis of drugs
Shoshi A, Müller U, Shoshi A, Ogultarhan V, Hofestädt R (2017)
In: Health Informatics Meets eHealth: Digital Insight – Information-Driven Health & Care. Proceedings of the 11th eHealth2017 Conference. Hayn D, Schreier G (Eds); Studies in Health Technology and Informatics, 236. Amsterdam: IOS Press: 128-135.
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2017 | Conference Abstract | PUB-ID: 2912298
Integrative analysis of mechanism of drug action and potential impact on the disease
Shoshi A, Zolotareva O, Kleine M, Königs C, Hofestädt R (2017)
Presented at the 13th International Symposium on Integrative Bioinformatics 2017, Odense.
PUB
 
2017 | Journal Article | PUB-ID: 2916589
Visualization and Analysis of MicroRNAs within KEGG Pathways using VANESA
Hamzeiy H, Suluyayla R, Brinkrolf C, Janowski SJ, Hofestädt R, Allmer J (2017)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 14(1).
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2017 | Journal Article | PUB-ID: 2914424
Integration and virtual reality exploration of biomedical data with CmPI and VANTED
Sommer B, Schreiber F (2017)
IT-INFORMATION TECHNOLOGY 59(4): 181-190.
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2017 | Bielefeld Dissertation | PUB-ID: 2913956
Petri-Netz-basierte Simulation biologischer Prozesse mit OpenModelica
Ochel L (2017)
Bielefeld: Universität Bielefeld.
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2017 | Conference Paper | PUB-ID: 2913690
Bayesian Collective Markov Random Fields for Subcellular Localization Prediction of Human Proteins
Zhu L, Ester M (2017)
In: Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics - ACM-BCB '17. ACM Press.
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2017 | Conference Abstract | PUB-ID: 2912309
KALIS – a web-based system for patient-specific risk assessment of drugs
Shoshi A (2017)
Presented at the Workshop on Computational Models in Biology and Medicine 2017, Hannover.
PUB
 
2017 | Journal Article | PUB-ID: 2910493
The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes
Romano P, Hofestädt R, Lange M, D'Elia D (2017)
BMC BIOINFORMATICS 18: 101.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Journal Article | PUB-ID: 2909099
DaTo: an atlas of biological databases and tools
Li Q, Zhou Y, Jiao Y, Zhang Z, Bai L, Tong L, Yang X, Sommer B, Hofestädt R, Chen M (2016)
JOURNAL OF INTEGRATIVE BIOINFORMATICS 13(4): 297.
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2016 | Journal Article | PUB-ID: 2900648 PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Journal Article | PUB-ID: 2901345
From single variants to protein cascades multiscale modeling of single nucleotide variant sets in genetic disorders
Mueller SC, Sommer B, Backes C, Haas J, Meder B, Meese E, Keller A (2016)
Journal of Biological Chemistry 291(4): 1582-1590.
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2015 | Conference Proceedings Editor | PUB-ID: 2901626
Computational Systems Biology: German/Russian/Turkish Network of Computational Systems Biology - Report 2015
Allmer J, Brinkrolf C, Hofestädt R, Sacar Demirci MD (Eds) (2015)
Medizinische Informatik und Bioinformatik.
PUB
 
2015 | Journal Article | PUB-ID: 2901356
Cancernet: a database for decoding multilevel molecular interactions across diverse cancer types
Meng X, Wang J, Yuan C, Li X, Zhou Y, Hofestädt R, Chen M (2015)
Oncogenesis 4: e177.
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2015 | Journal Article | PUB-ID: 2709397
Identifying adverse drug reactions and drug-induced diseases using network-based drug mapping
Shoshi A, Ogultarhan V, Hoppe T, Kormeier B, Müller U, Hofestädt R (2015)
Journal of Bioinformatics and Computational Biology 13(1): 1540007.
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2015 | Journal Article | PUB-ID: 2722420
GraphSAW: A web-based system for graphical analysis of drug interactions and side effects using pharmaceutical and molecular data
Shoshi A, Hoppe T, Kormeier B, Ogultarhan V, Hofestädt R (2015)
BMC Medical Informatics and Decision Making 15: 15.
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2015 | Journal Article | PUB-ID: 2788891
Good Medicine and Good Healthcare Demand Good Information (Systems)
Winter A, Hilgers R-D, Hofestädt R, Huebnert U, Knaup-Gregori P, Ose C, Schmoor C, Timmer A, Wege D (2015)
Methods of Information in Medicine 54(5): 385-387.
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2015 | Journal Article | PUB-ID: 2765914
CellWhere: graphical display of interaction networks organized on subcellular localizations
Zhu L, Malatras A, Thorley M, Aghoghogbe I, Mer A, Duguez S, Butler-Browne G, Voit T, Duddy W (2015)
Nucleic Acids Research 43(W1): W571-W575.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Journal Article | PUB-ID: 2901634
Open Problems in Petri Net Modeling and Simulation of Biological Systems
Chen M, Hofestädt R (2014)
it-Information Technology 56(2): 76-81.
PUB | DOI
 
2014 | Conference Abstract | PUB-ID: 2704586
Evaluation and Visualization of Pathway Efficiency based on Subcellular Protein Localizations (Workshop Abstract)
Popik OV, Sommer B, Hofestädt R, Ivanisenko VA (2014)
In: Proceedings of the CELLmicrocosmos neXt workshop. Sommer B (Ed); Bielefeld: Bielefeld University: 9-10.
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