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68 Publications

2017 | Conference Abstract | PUB-ID: 2908753
Extracting Scalar Quantities from Underwater Images - a Toolbox for Image Data from Fixed Observatories.
Osterloff J, Möller T, Nilssen I, Nattkemper TW (2017)
Presented at the Marine Imaging Workshop 2017, Kiel.
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2016 | Journal Article | PUB-ID: 2907705
Omics Fusion - A Platform for Integrative Analysis of Omics Data
Brink B, Seidel A, Kleinbölting N, Nattkemper TW, Albaum S (2016)
Journal of Integrative Bioinformatics 13(4: SI): 296.
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2016 | Journal Article | PUB-ID: 2900943
Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations
Langenkämper D, Jakobi T, Feld D, Jelonek L, Goesmann A, Nattkemper TW (2016)
Frontiers in Genetics 7: 5.
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2016 | Journal Article | PUB-ID: 2901413
Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging
Gorzolka K, Kölling J, Nattkemper TW, Niehaus K (2016)
PLOS ONE 11(3): 0150208.
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2016 | Journal Article | PUB-ID: 2903712
Computational Visual Stress Level Analysis of Calcareous Algae Exposed to Sedimentation
Osterloff J, Nilssen I, Eide I, de Oliveira Figueiredo MA, de Souza Tâmega FT, Nattkemper TW (2016)
PLOS ONE 11(6): e0157329.
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2016 | Journal Article | PUB-ID: 2901477
Robust normalization protocols for multiplexed fluorescence bioimage analysis
Ahmed Raza SE, Langenkämper D, Sirinukunwattana K, Epstein D, Nattkemper TW, Rajpoot NM (2016)
BioData Mining 9(1): 11.
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2015 | Journal Article | PUB-ID: 2722138
Learning to classify organic and conventional wheat - a machine-learning driven approach using the MeltDB 2.0 metabolomics analysis platform
Kessler N, Bonte A, Albaum S, Mäder P, Messmer M, Goesmann A, Niehaus K, Langenkämper G, Nattkemper TW (2015)
Frontiers in Bioinformatics and Computational Biology 3: 35.
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2015 | Journal Article | PUB-ID: 2724431 PUB | PDF | DOI
 
2015 | Journal Article | PUB-ID: 2772963
Dynamics of protein and polar lipid recruitment during lipid droplet assembly in Chlamydomonas reinhardtii
Tsai C-H, Zienkiewicz K, Amstutz CL, Brink B, Warakanont J, Roston R, Benning C (2015)
The Plant Journal 83(4): 650-660.
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2015 | Conference Abstract | PUB-ID: 2735538
Computational analysis of spatial species distribution for integrated stationary environmental monitoring
Osterloff J, Nilssen I, Möller T, Nattkemper TW (2015)
Presented at the Geohab 2015, Salvador, Bahia, Brazil.
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2014 | Conference Paper | PUB-ID: 2683648
Ranking Color Correction Algorithms using Cluster Indices
Osterloff J, Schoening T, Bergmann M, Durden JM, Ruhl HA, Nattkemper TW (2014)
Presented at the ICPR Workshop on Computer Vision for Analysis of Underwater Imagery, Stockhom.
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2014 | Conference Abstract | PUB-ID: 2690300
Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging
Kölling J, Zurowietz M, Nattkemper TW (2014)
Presented at the 4th Symposium on Biological Data Visualization (BioVis), Boston, MA, USA.
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2014 | Conference Abstract | PUB-ID: 2690322
Interactive Exploration of Spatial Distribution in Mass Spectrometry Imaging
Kölling J, Zurowietz M, Nattkemper TW (2014)
Presented at the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), Boston, MA, USA.
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2014 | Journal Article | PUB-ID: 2706029
ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis
Kessler N, Walter F, Persicke M, Albaum S, Kalinowski J, Goesmann A, Niehaus K, Nattkemper TW (2014)
PLoS ONE 9(11): e113909.
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2014 | Conference Abstract | PUB-ID: 2690436
Spatio-temporal analysis of metabolite profiles during barley germination
Kölling J, Gorzolka K, Niehaus K, Nattkemper TW (In Press)
Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany.
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2014 | Conference Paper | PUB-ID: 2690335
Interactive and dynamic web-based visual exploration of high dimensional bioimages with real time clustering
Rathke M, Kölling J, Gorzolka K, Niehaus K, Nattkemper TW (In Press)
Presented at the German Conference on Bioinformatics (GCB), Bielefeld, Germany.
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2014 | Journal Article | PUB-ID: 2705712
AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization
Langenkämper D, Goesmann A, Nattkemper TW (2014)
BMC Bioinformatics 15: 384.
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2014 | Conference Abstract | PUB-ID: 2655889
An overview and rating of benthic image pre-processings for color constancy
Osterloff J, Schoening T, Bergmann M, Nattkemper TW (2014)
Presented at the Marine Imaging Workshop, National Oceanography Centre, Southampton, UK.
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2014 | Conference Abstract | PUB-ID: 2676320
Automated Image based Biomass Quantification in Mesocosm Studies
Osterloff J, Nilssen I, de Oliveira Figueiredo MA, de Souza Tâmega FT, Möller T, Nattkemper TW (2014)
Presented at the Geohab 2014, Lorne, Victoria, Australia.
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2014 | Conference Abstract | PUB-ID: 2676334
Novelty detection in time lapse image data
Möller T, Nilssen I, Sumida PYG, Elbers KL, Nattkemper TW (2014)
Presented at the Geohab 2014, Lorne, Victoria, Australia.
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