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154 Publications

2015 | Bielefeld Dissertation | PUB-ID: 2786037 PUB | Files available
 
2014 | Journal Article | PUB-ID: 2651944
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection
Tielen P, Wibberg D, Blom J, Rosin N, Meyer A-K, Bunk B, Schobert M, Tüpker R, Schatschneider S, Rückert C, Albersmeier A, et al. (2014)
Genome announcements 2(1).
PUB | DOI | PubMed | Europe PMC
 
2014 | Journal Article | PUB-ID: 2656773
Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines
Rupp O, Becker J, Brinkrolf K, Timmermann C, Borth N, Pühler A, Noll T, Goesmann A (2014)
PLoS ONE 9(1): e85568.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Journal Article | PUB-ID: 2643946
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)
Dohm JC, Minoche AE, Holtgräwe D, Capella-Gutiérrez S, Zakrzewski F, Tafer H, Rupp O, Rosleff Sörensen T, Stracke R, Reinhardt R, Goesmann A, et al. (2014)
Nature 505(7484): 546-549.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Journal Article | PUB-ID: 2691732
Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria
Klippel B, Sahm K, Basner A, Wiebusch S, John P, Lorenz U, Peters A, Abe F, Takahashi K, Kaiser O, Goesmann A, et al. (2014)
Extremophiles 18(5): 853-863.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2615581
Chinese hamster genome sequenced from sorted chromosomes
Brinkrolf K, Rupp O, Laux H, Kollin F, Ernst W, Linke B, Kofler R, Romand S, Hesse F, Budach WE, Galosy S, et al. (2013)
Nature Biotechnology 31(8): 694-695.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, et al. (2013)
Environmental Microbiology 15(1): 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2635526
Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation
Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A (2013)
Journal of Biotechnology 168(1): 62-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2633427
Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis
Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE (2013)
Journal of Biotechnology 168(4): 731-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2552500
The Pan-Genome of the Animal Pathogen Corynebacterium pseudotuberculosis Reveals Differences in Genome Plasticity between the Biovar ovis and equi Strains
Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EGV, et al. (2013)
PLoS ONE 8(1): e53818.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2632946
Complete genome sequence of Pseudomonas sp. strain VLB120 a solvent tolerant, styrene degrading bacterium, isolated from forest soil
Köhler KAK, Rückert C, Schatschneider S, Vorhölter F-J, Szczepanowski R, Blank LM, Niehaus K, Goesmann A, Pühler A, Kalinowski J, Schmid A (2013)
Journal of Biotechnology 168(4): 729-730.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2645668
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production
Bogen C, Al-Dilaimi A, Albersmeier A, Wichmann J, Grundmann M, Rupp O, Lauersen KJ, Blifernez-Klassen O, Kalinowski J, Goesmann A, Mussgnug JH, et al. (2013)
BMC Genomics 14(1): 926.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2013 | Conference Paper | PUB-ID: 2538625
Einsatz von Protein- und Metabolit-Profiling-Methoden zur Unterscheidung von ökologischem und konventionellem Weizen
Bonte A, Kessler N, Nattkemper TW, Goesmann A, Cecile T, Mäder P, Niehaus K, Langenkämper G (In Press)
Presented at the 12. Wissenschaftstagung Ökologischer Landbau „Ideal und Wirklichkeit – Perspektiven Ökologischer Landbewirtschaftung“, Bonn, Germany.
PUB
 
2013 | Journal Article | PUB-ID: 2610129
MeltDB 2.0 - Advances of the metabolomics software system
Kessler N, Bonte A, Langenkämper G, Niehaus K, Goesmann A, Nattkemper TW (2013)
Bioinformatics 29(19): 2452-2459.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2549908
Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14
Wibberg D, Jelonek L, Rupp O, Kröber M, Eikmeyer FG, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A (2013)
Journal of Biotechnology 167(2): 142-155.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski M, Bekel T, Ander C, Pühler A, Rupp O, Stoye J, Schlüter A, Goesmann A (2013)
Journal of Biotechnology 167(2): 156-165.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2631956
Complete genome sequence of the kirromycin producer Streptomyces collinus Tü 365 consisting of a linear chromosome and two linear plasmids
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Pühler A, Kalinowski J, Weber T (2013)
Journal of Biotechnology 168(4): 739-740.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2529309
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing
Bolzan de Campos S, Youn J-W, Farina R, Jaenicke S, Jünemann S, Szczepanowski R, Beneduzi A, Vargas LK, Wendisch VF, Passaglia L (2013)
Microbial Ecology 65(3): 593-601.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature Biotechnology 31(4): 294-296.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Journal Article | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann S, Sedlazeck FJ, Prior K, Albersmeier A, John U, Kalinowski J, Mellmann A, Goesmann A, von Haeseler A, Stoye J, Harmsen D (2013)
Nature biotechnology 31(12): 1148.
PUB | DOI | WoS | PubMed | Europe PMC
 

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