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147 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936315
Kamal N, Ochßner I, Schwandner A, Viehöver P, Hausmann L, Töpfer R, Weisshaar B, Holtgräwe D (2019)
Characterization of genes and alleles involved in the control of flowering time in grapevine.
PLoS One 14(7): e0214703.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC | NCBI BioProject
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698
Pucker B, Holtgräwe D, Stadermann KB, Frey K, Huettel B, Reinhardt R, Weisshaar B (2019)
A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set.
PLOS ONE 14(5): e0216233.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
Pucker B, Schilbert H, Schumacher SF (2019)
Integrating Molecular Biology and Bioinformatics Education.
Journal of Integrative Bioinformatics.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda A, Feng T, Sheehan H, Walker‐Hale N, Pucker B, Lopez‐Nieves S, Guo R, Brockington S (2019)
The evolution of betalain biosynthesis in Caryophyllales.
New Phytologist.
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932870
Pucker B, Brockington SF (2018)
Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes.
BMC Genomics 19: 980.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921026
Haak M, Vinke S, Keller W, Droste J, Rückert C, Kalinowski J, Pucker B (2018)
High Quality de Novo Transcriptome Assembly of Croton tiglium.
Frontiers in Molecular Biosciences 5: 62.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933285
Herrera-Ubaldo H, Lozano-Sotomayor P, Ezquer I, Di Marzo M, Chávez Montes RA, Gómez-Felipe A, Pablo-Villa J, Diaz-Ramirez D, Ballester P, Ferrándiz C, Sagasser M, Colombo L, Marsch-Martínez N, de Folter S (2018)
New roles of NO TRANSMITTING TRACT and SEEDSTICK during medial domain development in Arabidopsis fruits.
Development 146(1): dev172395.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930296
Whitford CM, Dymek S, Kerkhoff D, März C, Schmidt O, Edich M, Droste J, Pucker B, Rückert C, Kalinowski J (2018)
Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications.
Journal of Biological Engineering 12: 13.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931064
Brinkrolf C, Henke NA, Ochel L, Pucker B, Kruse O, Lutter P (2018)
Modeling and Simulating the Aerobic Carbon Metabolism of a Green Microalga Using Petri Nets and New Concepts of VANESA.
Journal of Integrative Bioinformatics 15(3): 20180018.
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2018 | Diskussionspapier | Veröffentlicht | PUB-ID: 2920633
Friedrich A, Pucker B (2018)
Peer-review as a teaching method. Working Paper der AG Forschendes Lernen in der dghd; 2, 2018.
Carl von Ossietzky Universität Oldenburg.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915524
Pucker B, Holtgräwe D, Weisshaar B (2017)
Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence.
BMC Research Notes 10: 667.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913152
Bhambhani S, Lakhwani D, Gupta P, Pandey A, Dhar YV, Bag SK, Asif MH, Trivedi PK (2017)
Transcriptome and metabolite analyses in Azadirachta indica: identification of genes involved in biosynthesis of bioactive triterpenoids.
SCIENTIFIC REPORTS 7: 5043.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911903
Capistrano-Gossmann GG, Ries D, Holtgräwe D, Minoche A, Kraft T, Frerichmann SLM, Rosleff Sörensen T, Dohm JC, González I, Schilhabel M, Varrelmann M, Tschoep H, Uphoff H, Schütze K, Borchardt D, Toerjek O, Mechelke W, Lein JC, Schechert AW, Frese L, Himmelbauer H, Weisshaar B, Kopisch-Obuch FJ (2017)
Crop wild relative populations of Beta vulgaris allow direct mapping of agronomically important genes.
Nature Communications 8: 15708.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909139
Stracke R, Turgut-Kara N, Weisshaar B (2017)
The AtMYB12 activation domain maps to a short C-terminal region of the transcription factor.
Zeitschrift für Naturforschung C 72(7-8): 251-257.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907696
Kleinbölting N, Huep G, Weisshaar B (2017)
Enhancing the GABI-Kat Arabidopsis thaliana T-DNA insertion mutant database by incorporating Araport11 annotation.
Plant and Cell Physiology 58(1): e7.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911462
Alkhateeb R, Rückert C, Rupp O, Pucker B, Hublik G, Wibberg D, Niehaus K, Pühler A, Vorhölter F-J (2017)
Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data.
Journal of Biotechnology 253: 55-61.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905844
Pucker B, Holtgräwe D, Rosleff Sörensen T, Stracke R, Viehöver P, Weisshaar B (2016)
A de novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny.
PLoS ONE 11(10): 0164321.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905177
Stadermann KB, Holtgräwe D, Weisshaar B (2016)
Chloroplast genome sequence of Arabidopsis thaliana accession Landsberg erecta assembled from Single-Molecule, Real-Time sequencing data.
Genome Announcements 4(5): e00975-16.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903501
Kowar T, Zakrzewski F, Macas J, Kobližková A, Viehöver P, Weisshaar B, Schmidt T (2016)
Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris).
BMC Plant Biology 16: 120.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901603
Ries D, Holtgräwe D, Viehöver P, Weisshaar B (2016)
Rapid gene identification in sugar beet using deep sequencing of DNA from phenotypic pools selected from breeding panels.
BMC Genomics 17: 236.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | EBI - ENA Project
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903490
Li Y, Provenzano S, Bliek M, Spelt C, Appelhagen I, Machado de Faria L, Verweij W, Schubert A, Sagasser M, Seidel T, Weisshaar B, Koes R, Quattrocchio F (2016)
Evolution of tonoplast P-ATPase transporters involved in vacuolar acidification.
New Phytologist 211(3): 1092-1107.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905170
Hilker R, Stadermann KB, Schwengers O, Anisiforov E, Jaenicke S, Weisshaar B, Zimmermann T, Goesmann A (2016)
ReadXplorer 2 - detailed read mapping analysis and visualization from one single source.
Bioinformatics 32(24): 3702-3708.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900211
Ishihara H, Tohge T, Viehöver P, Fernie AR, Weisshaar B, Stracke R (2016)
Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6.
Journal of Experimental Botany 67(5): 1505-1517.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2787257
Schwichtenberg K, Wenke T, Zakrzewski F, Seibt K, Minoche A, Dohm J, Weisshaar B, Himmelbauer H, Schmidt T (2016)
Diversification, Evolution and Methylation of Short Interspersed Nuclear Element families in sugar beet and related Amaranthaceae species.
The Plant Journal 85(2): 229-244.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907593
Rafique MZ, Carvalho E, Stracke R, Palmieri L, Herrera L, Feller A, Malnoy M, Martens S (2016)
Nonsense Mutation Inside Anthocyanidin Synthase Gene Controls Pigmentation in Yellow Raspberry (Rubus idaeus L.).
Frontiers in Plant Science 7: 1892.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775617
Stadermann KB, Weisshaar B, Holtgräwe D (2015)
SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome.
BMC Bioinformatics 16: 295.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717880
Schierenbeck L, Ries D, Rogge K, Grewe S, Weisshaar B, Kruse O (2015)
Fast forward genetics to identify mutations causing a high light tolerant phenotype in Chlamydomonas reinhardtii by whole-genome-sequencing.
BMC Genomics 16: 57.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764063
Minoche AE, Dohm JC, Schneider J, Holtgräwe D, Viehöver P, Montfort M, Rosleff Sörensen T, Weisshaar B, Himmelbauer H (2015)
Exploiting single-molecule transcript sequencing for eukaryotic gene prediction.
Genome Biology 16: 184.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2770216
Kleinbölting N, Huep G, Appelhagen I, Viehöver P, Li Y, Weisshaar B (2015)
The structural features of thousands of T-DNA insertion sites are consistent with a double-strand break repair based insertion mechanism.
Molecular Plant 8(11): 1651-1664.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732031
Appelhagen I, Nordholt N, Seidel T, Spelt K, Koes R, Quattrochio F, Sagasser M, Weisshaar B (2015)
Transparent Testa 13 is a tonoplast P3A-ATPase required for vacuolar deposition of proanthocyanidins in Arabidopsis thaliana seeds.
The Plant Journal 82(5): 840-849.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2696778
Stracke R, Holtgräwe D, Schneider J, Pucker B, Rosleff Sörensen T, Weisshaar B (2014)
Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet ( Beta vulgaris ).
BMC Plant Biology 14(1): 249.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699085
Holtgräwe D, Rosleff Sörensen T, Viehöver P, Schneider J, Schulz B, Borchardt D, Kraft T, Himmelbauer H, Weisshaar B (2014)
Reliable In Silico Identification of Sequence Polymorphisms and Their Application for Extending the Genetic Map of Sugar Beet (Beta vulgaris).
PLoS ONE 9(10): e110113.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700166
Huep G, Kleinbölting N, Weisshaar B (2014)
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana.
Plant Methods 10: 28.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker R, Stadermann KB, Doppmeier D, Kalinowski J, Stoye J, Straube J, Winnebald J, Goesmann A (2014)
ReadXplorer - Visualization and Analysis of Mapped Sequences.
Bioinformatics 30(16): 2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678005
Heitkam T, Holtgräwe D, Dohm JC, Minoche AE, Himmelbauer H, Weisshaar B, Schmidt T (2014)
Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades.
The Plant Journal 79(3): 385-397.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643981
Bolger ME, Weisshaar B, Scholz U, Stein N, Usadel B, Mayer KFX (2014)
Plant genome sequencing — applications for crop improvement.
Current Opinion in Biotechnology 26(4): 31-37.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674171
Dubos C, Kelemen Z, Sebastian A, Bülow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014)
Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.
BMC genomics 15(1): 317.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
Dohm JC, Minoche AE, Holtgräwe D, Capella-Gutiérrez S, Zakrzewski F, Tafer H, Rupp O, Rosleff Sörensen T, Stracke R, Reinhardt R, Goesmann A, Kraft T, Schulz B, Stadler PF, Schmidt T, Gabaldón T, Lehrach H, Weisshaar B, Himmelbauer H (2014)
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris).
Nature 505(7484): 546-549.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689802
Fechter I, Hausmann L, Zyprian E, Daum M, Holtgräwe D, Weisshaar B, Töpfer R (2014)
QTL analysis of flowering time and ripening traits suggests an impact of a genomic region on linkage group 1 in Vitis.
Theoretical and Applied Genetics 127(9): 1857-1872.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2684495
Dally N, Xiao K, Holtgräwe D, Jung C (2014)
The B2 flowering time locus of beet encodes a zinc finger transcription factor.
Proceedings of the National Academy of Sciences 111(28): 10365-10370.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2679186
Appelhagen I, Thiedig K, Nordholt N, Schmidt N, Huep G, Sagasser M, Weisshaar B (2014)
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection.
Planta 240(5): 955-970.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2668850
Zakrzewski F, Schubert V, Viehöver P, Minoche AE, Dohm JC, Himmelbauer H, Weisshaar B, Schmidt T (2014)
The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation.
The Plant Journal 78(6): 937-950.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2579749
Bolle C, Huep G, Kleinbölting N, Haberer G, Mayer K, Leister D, Weisshaar B (2013)
GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana.
The Plant Journal 75(1): 157-171.
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2562610
Weber B, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T (2013)
Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration.
Mobile DNA 4(1): 8.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448791
Kleinbölting N, Huep G, Klotgen A, Viehöver P, Weisshaar B (2012)
GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database.
Nucleic Acids Research 40(D1): D1211-D1215.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486155
Junker A, Mönke G, Rutten T, Keilwagen J, Seifert M, Thi TMN, Renou J-P, Balzergue S, Viehöver P, Hähnel U, Ludwig-Müller J, Altschmied L, Conrad U, Weisshaar B, Bäumlein H (2012)
Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana.
The Plant Journal 71(3): 427-442.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2460882
Fechter I, Hausmann L, Daum M, Rosleff Sörensen T, Viehöver P, Weisshaar B, Töpfer R (2012)
Candidate genes within a 143 kb region of the flower sex locus in Vitis.
Molecular Genetics and Genomics 287(3): 247-259.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2454417
Dohm JC, Lange C, Holtgräwe D, Rosleff Sörensen T, Borchardt D, Schulz B, Lehrach H, Weisshaar B, Himmelbauer H (2012)
Palaeohexaploid Ancestry for Caryophyllales Inferred from Extensive Gene-Based Physical and Genetic Mapping of the Sugar Beet Genome (Beta vulgaris).
The Plant Journal 70(3): 528-540.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2532965
Wollrab C, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T (2012)
Evolutionary reshuffling in the Errantivirus lineage Elbe within the Beta vulgaris genome.
The Plant Journal 72(4): 636-651.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498922
Pin PA, Zhang W, Vogt SH, Dally N, Büttner B, Schulze-Buxloh G, Jelly NS, Chia TYP, Mutasa-Göttgens ES, Dohm JC, Himmelbauer H, Weisshaar B, Kraus J, Gielen JJL, Lommel M, Weyens G, Wahl B, Schechert A, Nilsson O, Jung C, Kraft T, Müller AE (2012)
The Role of a Pseudo-Response Regulator Gene in Life Cycle Adaptation and Domestication of Beet.
Current Biology 22(12): 1095-1101.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2457584
Menzel G, Krebs C, Diez M, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T (2012)
Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives.
Plant Molecular Biology 78(4-5): 393-405.
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2528126
Mönke G, Seifert M, Keilwagen J, Mohr M, Grosse I, Hähnel U, Junker A, Weisshaar B, Conrad U, Bäumlein H, Altschmied L (2012)
Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon.
Nucleic Acids Research 40(17): 8240-8254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2353318
Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun J-H, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park B-S, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IAP, Batley J, Kim J-S, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon S-J, Choi S-R, Lee T-H, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z (2011)
The genome of the mesopolyploid crop species Brassica rapa.
Nature Genetics 43(10): 1035-1039.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2379960
Pedersen DS, Coppens F, Ma L, Antosch M, Marktl B, Merkle T, Beemster GT, Houben A, Grasser KD (2011)
The plant-specific family of DNA-binding proteins containing three HMG-box domains interacts with mitotic and meiotic chromosomes.
New Phytologist 192(3): 577-589.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411320
Wenke T, Dobel T, Rosleff Sörensen T, Junghans H, Weisshaar B, Schmidt T (2011)
Targeted identification of short interspersed nuclear element families shows their widespread existence and extreme heterogeneity in plant genomes.
The Plant Cell 23(9): 3117-3128.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317352
Zakrzewski F, Weisshaar B, Fuchs J, Bannack E, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T (2011)
Epigenetic profiling of heterochromatic satellite DNA.
Chromosoma 120(4): 409-422.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375640
Merkle T, Grasser KD (2011)
Unexpected mobility of plant chromatin-associated HMGB proteins.
Plant Signaling & Behavior 6(6): 878-880.
PUB | DOI | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2286819
Appelhagen I, Lu G-H, Huep G, Schmelzer E, Weisshaar B, Sagasser M (2011)
TRANSPARENT TESTA1 interacts with R2R3-MYB factors and affects early and late steps of flavonoid biosynthesis in the endothelium of Arabidopsis thaliana seeds.
The Plant Journal 67(3): 406-419.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317309
Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R (2011)
Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: Characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes.
Gene 484(1-2): 61-68.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1994730
Merkle T (2011)
Nucleo-cytoplasmic transport of proteins and RNA in plants.
Plant Cell Reports 30(2): 153-176.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1896541
Frank S, Keck M, Sagasser M, Niehaus K, Weisshaar B, Stracke R (2011)
Two differentially expressed MATE factor genes from apple complement the Arabidopsis transparent testa12 mutant.
Plant Biology 13(1): 42-50.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1987138
Grewe F, Herres S, Viehöver P, Polsakiewicz M, Weisshaar B, Knoop V (2011)
A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii.
Nucleic Acids Research 39(7): 2890-2902.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1912700
Stracke R, Jahns O, Keck M, Tohge T, Niehaus K, Fernie AR, Weisshaar B (2010)
Analysis of PRODUCTION OF FLAVONOL GLYCOSIDES-dependent flavonol glycoside accumulation in Arabidopsis thaliana plants reveals MYB11-, MYB12- and MYB111-independent flavonol glycoside accumulation.
New Phytologist 188(4): 985-1000.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1794548
Lange C, Mittermayr L, Dohm JC, Holtgräwe D, Weisshaar B, Himmelbauer H (2010)
High-throughput identification of genetic markers using representational oligonucleotide microarray analysis.
Theoretical and Applied Genetics 121(3): 549-565.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275
Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehöver P, Arnold W, Bekel T, Blom J, Gartemann K-H, Linke B, Goesmann A, Pühler A, Shukla SK, Tauch A (2010)
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.
BMC Genomics 11(1): 91.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1665020
Zakrzewski F, Wenke T, Holtgräwe D, Weisshaar B, Schmidt T (2010)
Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris.
BMC Plant Biology 10(1): 8.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588954
Chandran D, Inada N, Hather G, Kleindt CK, Wildermuth MC (2010)
Laser microdissection of Arabidopsis cells at the powdery mildew infection site reveals site-specific processes and regulators.
Proceedings of the National Academy of Sciences of the United States of America 107(1): 460-465.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588513
Brueggemann J, Weisshaar B, Sagasser M (2010)
A WD40-repeat gene from Malus x domestica is a functional homologue of Arabidopsis thaliana TRANSPARENT TESTA GLABRA1.
Plant Cell Reports 29(3): 285-294.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589272
Stracke R, Favory J-J, Gruber H, Bartelniewoehner L, Bartels S, Binkert M, Funk M, Weisshaar B, Ulm R (2010)
The Arabidopsis bZIP transcription factor HY5 regulates expression of the PFG1/MYB12 gene in response to light and ultraviolet-B radiation.
Plant Cell and Environment 33(1): 88-103.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588692
Steinweg C, Kuenne CT, Billion A, Mraheil MA, Domann E, Ghai R, Barbuddhe SB, Kaerst U, Goesmann A, Pühler A, Weisshaar B, Wehland J, Lampidis R, Kreft J, Goebel W, Chakraborty T, Hain T (2010)
Complete Genome Sequence of Listeria seeligeri, a Nonpathogenic Member of the Genus Listeria.
Journal of Bacteriology 192(5): 1473-1474.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1912695
Kleindt CK, Stracke R, Mehrtens F, Weisshaar B (2010)
Expression analysis of flavonoid biosynthesis genes during Arabidopsis thaliana silique and seed development with a primary focus on the proanthocyanidin biosynthetic pathway.
BMC Research Notes 3(1): 255.
PUB | PDF | DOI | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795152
Wolf L, Rizzini L, Stracke R, Ulm R, Rensing SA (2010)
The Molecular and Physiological Responses of Physcomitrella patens to Ultraviolet-B Radiation.
Plant Physiology 153(3): 1123-1134.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795171
Appelhagen I, Huep G, Lu G-H, Strompen G, Weisshaar B, Sagasser M (2010)
Weird fingers: Functional analysis of WIP domain proteins.
FEBS Letters 584(14): 3116-3122.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996275
Niemeier S, Alves jun. L, Merkle T (2010)
Improvement of the design and generation of highly specific plant knockdown lines using primary synthetic microRNAs (pri-smiRNAs).
BMC Research Notes 3(1): 59.
PUB | PDF | DOI | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1896548
Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L (2010)
MYB transcription factors in Arabidopsis.
Trends in Plant Science 15(10): 573-581.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968236
Pedersen DS, Merkle T, Marktl B, Lildballe DL, Antosch M, Bergmann T, Tönsing K, Anselmetti D, Grasser KD (2010)
Nucleocytoplasmic Distribution of the Arabidopsis Chromatin-Associated HMGB2/3 and HMGB4 Proteins.
Plant Physiology 154(4): 1831-1841.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1968319
Armbruster U, Zuehlke J, Rengstl B, Kreller R, Makarenko E, Ruehle T, Schuenemann D, Jahns P, Weisshaar B, Nickelsen J, Leister D (2010)
The Arabidopsis Thylakoid Protein PAM68 Is Required for Efficient D1 Biogenesis and Photosystem II Assembly.
The Plant Cell 22(10): 3439-3460.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783022
Krawczyk J, Goesmann A, Nolte R, Werber M, Weisshaar B (2009)
Trace2PS and FSA2PS: two software toolkits for converting trace and fsa files to PostScript format.
Source Code for Biology and Medicine 4(1): 4.
PUB | PDF | DOI | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929146
Baumbach J, Wittkop T, Kleindt CK, Tauch A (2009)
Integrated analysis and reconstruction of microbial transcriptional gene regulatory networks using CoryneRegNet.
Nature Protocols 4(6): 992-1005.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321
Dondrup M, Albaum S, Griebel T, Henckel K, Jünemann S, Kahlke T, Kleindt CK, Kuester H, Linke B, Mertens D, Mittard-Runte V, Neuweger H, Runte KJ, Tauch A, Tille F, Pühler A, Goesmann A (2009)
EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data.
BMC Bioinformatics 10(1): 50.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591742
Preuss A, Stracke R, Weisshaar B, Hillebrecht A, Matern U, Martens S (2009)
Arabidopsis thaliana expresses a second functional flavonol synthase.
FEBS Letters 583(12): 1981-1986.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1590766
Grewe F, Viehöver P, Weisshaar B, Knoop V (2009)
A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii.
Nucleic Acids Research 37(15): 5093-5104.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539
Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T (2009)
Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana.
Nucleic Acids Research 37(12): 4010-4021.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589556
Wenke T, Holtgräwe D, Horn AV, Weisshaar B, Schmidt T (2009)
An abundant and heavily truncated non-LTR retrotransposon (LINE) family in Beta vulgaris.
Plant Molecular Biology 71(6): 585-597.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589760
Czemmel S, Stracke R, Weisshaar B, Cordon N, Harris NN, Walker AR, Robinson SP, Bogs J (2009)
The Grapevine R2R3-MYB Transcription Factor VvMYBF1 Regulates Flavonol Synthesis in Developing Grape Berries.
Plant Physiology 151(3): 1513-1530.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635243
Grasser M, Kane CM, Merkle T, Melzer M, Emmersen J, Grasser KD (2009)
Transcript Elongation Factor TFIIS Is Involved in Arabidopsis Seed Dormancy.
Journal of Molecular Biology 386(3): 598-611.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636402
Stracke R, De Vos RCH, Bartelniewoehner L, Ishihara H, Sagasser M, Martens S, Weisshaar B (2009)
Metabolomic and genetic analyses of flavonol synthesis in Arabidopsis thaliana support the in vivo involvement of leucoanthocyanidin dioxygenase.
Planta 229(2): 427-445.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636583
Hansen FT, Madsen CK, Nordland AM, Grasser M, Merkle T, Grasser KD (2008)
A Novel Family of Plant DNA-Binding Proteins Containing both HMG-Box and AT-Rich Interaction Domains.
Biochemistry 47(50): 13207-13214.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592024
Vorhölter F-J, Schneiker-Bekel S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Pühler A (2008)
The genome of Xanthomonas campestris pv. campestris B 100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
Journal of Biotechnology 134(1-2): 33-45.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586197
Dubos C, Le Gourrierec J, Baudry A, Huep G, Lanet E, Debeaujon I, Routaboul J-M, Alboresi A, Weisshaar B, Lepiniec L (2008)
MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana.
The Plant Journal 55(6): 940-953.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587614
Hanano S, Stracke R, Jakoby M, Merkle T, Domagalska MA, Weisshaar B, Davis SJ (2008)
A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters.
BMC Genomics 9(1): 182.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585682
Benhamed M, Martin-Magniette M-L, Taconnat L, Bitton F, Servet C, De Clercq R, De Meyer B, Buysschaert C, Rombauts S, Villarroel R, Aubourg S, Beynon J, Bhalerao RP, Coupland G, Gruissem W, Menke FLH, Weisshaar B, Renou J-P, Zhou D-X, Hilson P (2008)
Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.
The Plant Journal 56(3): 493-504.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586335
Menzel G, Dechyeva D, Wenke T, Holtgräwe D, Weisshaar B, Schmidt T (2008)
Diversity of a complex centromeric satellite and molecular characterization of dispersed sequence families in sugar beet (Beta vulgaris).
Annals of Botany 102(4): 521-530.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592809
Kiilerich B, Stemmer C, Merkle T, Launholt D, Gorr G, Grasser KD (2008)
Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens.
Gene 407(1-2): 86-97.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586460
Uelker B, Li Y, Rosso MG, Logemann E, Somssich IE, Weisshaar B (2008)
T-DNA-mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants.
Nature Biotechnology 26(9): 1015-1017.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585886
Luo J, Butelli E, Hill L, Parr A, Niggeweg R, Bailey P, Weisshaar B, Martin C (2008)
AtMYB12 regulates caffeoyl quinic acid and flavonol synthesis in tomato: expression in fruit results in very high levels of both types of polyphenol.
The Plant Journal 56(2): 316-326.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585918
Tauch A, Trost E, Tilker A, Ludewig U, Schneiker-Bekel S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Goetker S, Kalinowski J, Kamp P-B, Lobo FP, Viehöver P, Weisshaar B, Soriano F, Droege M, Pühler A (2008)
The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing.
Journal of Biotechnology 136(1-2): 11-21.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939
Tauch A, Schneider J, Szczepanowski R, Tilker A, Viehöver P, Gartemann K-H, Arnold W, Blom J, Brinkrolf K, Brune I, Goetker S, Weisshaar B, Goesmann A, Droege M, Pühler A (2008)
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids.
Journal of Biotechnology 136(1-2): 22-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635969
Lange C, Holtgräwe D, Schulz B, Weisshaar B, Himmelbauer H (2008)
Construction and characterization of a sugar beet (Beta vulgaris) fosmid library.
Genome 51(11): 948-951.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316612
Anselmetti D, Hansmeier N, Kalinowski J, Martini J, Merkle T, Palmisano R, Ros R, Schmied K, Sischka A, Tönsing K (2007)
Analysis of Subcellular Surface Structure, Function and Dynamics.
Analytical and Bioanalytical Chemistry 387(1): 83-89.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632730
Wang H-Y, Klatte M, Jakoby M, Baeumlein H, Weisshaar B, Bauer P (2007)
Iron deficiency-mediated stress regulation of four subgroup Ib BHLH genes in Arabidopsis thaliana.
Planta 226(4): 897-908.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593589
Martini J, Schmied K, Palmisano R, Tönsing K, Anselmetti D, Merkle T (2007)
Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time.
Journal of Structural Biology 158(3): 401-409.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596131
Li Y, Rosso MG, Viehöver P, Weisshaar B (2007)
GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions.
Nucleic Acids Research 35(Database): D874-D878.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593810
Vorwieger A, Gryczka C, Czihal A, Douchkov D, Tiedemann J, Mock H-P, Jakoby M, Weisshaar B, Saalbach I, Baumlein H (2007)
Iron assimilation and transcription factor controlled synthesis of riboflavin in plants.
Planta 226(1): 147-158.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593906
Stracke R, Ishihara H, Huep G, Mehrtens F, Niehaus K, Weisshaar B, Barsch A (2007)
Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling.
The Plant Journal 50(4): 660-677.
PUB | DOI | WoS | PubMed | Europe PMC | NASC Seedstock
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593498
Gigolashvili T, Berger B, Mock H-P, Müller C, Weisshaar B, Fluegge U-I (2007)
The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in *Arabidopsis thaliana*.
The Plant Journal 50(5): 886-901.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593506
Berger B, Stracke R, Yatusevich R, Weisshaar B, Fluegge U-I, Gigolashvili T (2007)
A simplified method for the analysis of transcription factor-promoter interactions that allows high-throughput data generation.
The Plant Journal 50(5): 911-916.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595711
Gronlund JT, Stemmer C, Lichota J, Merkle T, Grasser KD (2007)
Functionality of the beta/six site-specific recombination system in tobacco and Arabidopsis: A novel tool for genetic engineering of plant genomes.
Plant Molecular Biology 63(4): 545-556.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996264
Bellin D, Schulz B, Rosleff Sörensen T, Salamini F, Schneider K (2007)
Transcript profiles at different growth stages and tap-root zones identify correlated developmental and metabolic pathways of sugar beet.
Journal of Experimental Botany 58(3): 699-715.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593770
Ballvora A, Joecker A, Viehöver P, Ishihara H, Paal J, Meksem K, Bruggmann R, Schoof H, Weisshaar B, Gebhardt C (2007)
Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments.
BMC Genomics 8(1): 112.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1632708
Schneider K, Kulosa D, Rosleff Sörensen T, Moehring S, Heine M, Durstewitz G, Polley A, Weber E, Jamsari *, Lein J, Hohmann U, Tahiro E, Weisshaar B, Schulz B, Koch G, Jung C, Ganal M (2007)
Analysis of DNA polymorphisms in sugar beet (Beta vulgaris L.) and development of an SNP-based map of expressed genes.
Theoretical and Applied Genetics 115(5): 601-615.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599537
Grasser M, Lentz A, Lichota J, Merkle T, Grasser KD (2006)
The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins.
Journal of Molecular Biology 358(3): 654-664.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596329
Launholt D, Merkle T, Houben A, Schulz A, Grasser KD (2006)
Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus.
The Plant Cell 18(11): 2904-2918.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599409
Calderon-Villalobos LIA, Kuhnle C, Li HB, Rosso MG, Weisshaar B, Schwechheimer C (2006)
LucTrap vectors are tools to generate luciferase fusions for the quantification of transcript and protein abundance in vivo.
Plant Physiology 141(1): 3-14.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598258
Jakoby MJ, Weinl C, Pusch S, Kuijt SJH, Merkle T, Dissmeyer N, Schnittger A (2006)
Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1.
Plant Physiology 141(4): 1293-1305.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599329
Li Y, Rosso MG, Uelker B, Weisshaar B (2006)
Analysis of T-DNA insertion site distribution patterns in Arabidopsis thaliana reveals special features of genes without insertions.
Genomics 87(5): 645-652.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597316
Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Kaerst U, Goesmann A, Bekel T, Bartels D, Kaiser O, Meyer F, Pühler A, Weisshaar B, Wehland J, Liang C, Dandekar T, Lampidis R, Kreft J, Goebel W, Chakraborty T (2006)
Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes.
Journal of Bacteriology 188(23): 8299-8302.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1597619
Kaminaka H, Naeke C, Epple P, Dittgen J, Schuetze K, Chaban C, Holt BF, III, Merkle T, Schaefer E, Harter K, Dangl JL (2006)
bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection.
The EMBO JOURNAL 25(18): 4400-4411.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867610
Schmid KJ, Ramos-Onsins S, Ringys-Beckstein H, Weisshaar B, Mitchell-Olds T (2005)
A multilocus sequence survey in Arabidopsis thaliana reveals a genome-wide departure from a neutral model of DNA sequence polymorphism.
Genetics 169(3): 1601-1615.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864027
Carrari F, Coll-Garcia D, Schauer N, Lytovchenko A, Palacios-Rojas N, Balbo I, Rosso MG, Fernie AR (2005)
Deficiency of a plastidial adenylate kinase in Arabidopsis results in elevated photosynthetic amino acid biosynthesis and enhanced growth.
Plant Physiology 137(1): 70-82.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867606
Mehrtens F, Kranz HD, Bednarek P, Weisshaar B (2005)
The Arabidopsis transcription factor MYB12 is a flavonol-specific regulator of phenylpropanoid biosynthesis.
Plant Physiology 138(2): 1083-1096.
PUB | DOI | WoS | PubMed | Europe PMC | NASC Seedstock
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996239
Sarnowski TJ, Ríos G, Jásik J, Swiezewski S, Kaczanowski S, Li Y, Kwiatkowska A, Pawlikowska K, Koźbiał M, Koźbiał P, Koncz C, Jerzmanowski A (2005)
SWI3 subunits of putative SWI/SNF chromatin-remodeling complexes play distinct roles during Arabidopsis development.
The Plant Cell 17(9): 2454-2472.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996253
Casazza AP, Rossini S, Rosso MG, Soave C (2005)
Mutational and expression analysis of ELIP1 and ELIP2 in Arabidopsis thaliana.
Plant Molecular Biology 58(1): 41-51.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864047
Xing S, Rosso MG, Zachgo S (2005)
ROXY1, a member of the plant glutaredoxin family, is required for petal development in Arabidopsis thaliana.
Development 132(7): 1555-1565.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864201
Pan X, Li Y, Stein L (2005)
Site preferences of insertional mutagenesis agents in Arabidopsis.
Plant Physiology 137(1): 168-175.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604404
Hartmann U, Sagasser M, Mehrtens F, Stracke R, Weisshaar B (2005)
Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light-responsive and tissue-specific activation of phenylpropanoid biosynthesis genes.
Plant Molecular Biology 57(2): 155-171.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864036
Niewiadomski P, Knappe S, Geimer S, Fischer K, Schulz B, Unte US, Rosso MG, Ache P, Flugge U-I, Schneider A (2005)
The Arabidopsis Plastidic Glucose 6-Phosphate/Phosphate Translocator GPT1 Is Essential for Pollen Maturation and Embryo Sac Development.
The Plant Cell 17(3): 760-775.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601626
Schmitt-John T, Drepper C, Mussmann A, Hahn P, Kuhlmann M, Thiel C, Hafner M, Lengeling A, Heimann P, Jones JM, Meisler MH, Jockusch H (2005)
Mutation of Vps54 causes motor neuron disease and defective spermiogenesis in the wobbler mouse.
Nature Genetics 37(11): 1213-1215.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603317
Tauch A, Kaiser O, Hain T, Goesmann A, Weisshaar B, Albersmeier A, Bekel T, Bischoff N, Brune I, Chakraborty T, Kalinowski J, Meyer F, Rupp O, Schneiker-Bekel S, Viehöver P, Pühler A (2005)
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora.
Journal of Bacteriology 187(13): 4671-4682.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996233
Holtgräwe D, Scholz A, Altmann B, Scheibe R (2005)
Cytoskeleton-associated, carbohydrate-metabolizing enzymes in maize identified by yeast two-hybrid screening.
Physiologia Plantarum 125(2): 141-156.
PUB | DOI | WoS
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996216
Kanter U, Usadel B, Guerineau F, Li Y, Pauly M, Tenhaken R (2005)
The inositol oxygenase gene family of Arabidopsis is involved in the biosynthesis of nucleotide sugar precursors for cell-wall matrix polysaccharides.
Planta 221(2): 243-254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996259
Witte C-P, Rosso MG, Romeis T (2005)
Identification of three urease accessory proteins that are required for urease activation in Arabidopsis.
Plant Physiology 139(3): 1155-1162.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996224
Vetter G, Hily J-M, Klein E, Schmidlin L, Haas M, Merkle T, Gilmer D (2004)
Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein.
The Journal of General Virology 85(8): 2459-2469.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606567
Zimmermann IM, Heim MA, Weisshaar B, Uhrig JF (2004)
Comprehensive identification of Arabidopsis thaliana MYB transcription factors interacting with R/B-like BHLH proteins.
The Plant Journal 40(1): 22-34.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867628
Baudry A, Heim MA, Dubreucq B, Caboche M, Weisshaar B, Lepiniec L (2004)
TT2, TT8, and TTG1 synergistically specify the expression of BANYULS and proanthocyanidin biosynthesis in Arabidopsis thaliana.
The Plant Journal 39(3): 366-380.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867619
Jakoby M, Wang H-Y, Reidt W, Weisshaar B, Bauer P (2004)
FRU (BHLH029) is required for induction of iron mobilization genes in Arabidopsis thaliana.
FEBS Letters 577(3): 528-534.
PUB | DOI | WoS | PubMed | Europe PMC
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864021
Usadel B, Kuschinsky AM, Rosso MG, Eckermann N, Pauly M (2004)
RHM2 is involved in mucilage pectin synthesis and is required for the development of the seed coat in Arabidopsis.
Plant Physiology 134(1): 286-295.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1996206
Grasser KD, Grill S, Duroux M, Launholt D, Thomsen MS, Nielsen BV, Nielsen HK, Merkle T (2004)
HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein.
Biochemistry 43(5): 1309-1314.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609377
Strizhov N, Li Y, Rosso MG, Viehöver P, Dekker K, Weisshaar B (2003)
High-throughput generation of sequence indexes from T-DNA mutagenized Arabidopsis thaliana lines.
Biotechniques 35(6): 1164-1168.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2439047
Ziemienowicz A, Haasen D, Staiger D, Merkle T (2003)
Arabidopsis transportin1 is the nuclear import receptor for the circadian clock-regulated RNA-binding protein AtGRP7.
Plant Molecular Biology 53(1/2): 201-212.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867634
Dekker KA, Rosleff Sörensen T, Saedler H, Weisshaar B (2003)
Functional Genomic Tools for Arabidopsis available at the MPIZ.
Biotechnoligia 4(63): 19-31.
PUB
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867653
Törjék O, Berger D, Meyer RC, Müssig C, Schmid KJ, Rosleff Sörensen T, Weisshaar B, Mitchell-Olds T, Altmann T (2003)
Establishment of a high-efficiency SNP-based framework marker set for Arabidopsis.
The Plant Journal 36(1): 122-140.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1867691
Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC (2003)
The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.
Molecular Biology and Evolution 20(5): 735-747.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609623
Bailey PC, Martin C, Toledo-Ortiz G, Quail PH, Huq E, Heim MA, Jakoby M, Werber M, Weisshaar B (2003)
Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.
The Plant Cell 15(11): 2497-2502.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1610687
Li Y, Rosso MG, Strizhov N, Viehöver P, Weisshaar B (2003)
GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana.
Bioinformatics 19(11): 1441-1442.
PUB | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609190
Rosso MG, Li Y, Strizhov N, Reiss B, Dekker K, Weisshaar B (2003)
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics.
Plant Molecular Biology 53(1/2): 247-259.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank | NASC Seedstock
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1990229
Hunger S, Di Gaspero G, Mohring S, Bellin D, Schafer-Pregl R, Borchardt DC, Durel C-E, Werber M, Weisshaar B, Salamini F, Schneider K (2003)
Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.).
Genome 46(1): 70-82.
PUB | DOI | WoS | PubMed | Europe PMC
 

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