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136 Publications

2018 | Journal Article | PUB-ID: 2920750
Maus I, Rumming M, Bergmann I, Heeg K, Pohl M, Nettmann E, Jaenicke S, Blom J, Pühler A, Schlüter A, Sczyrba A, Klocke M (2018)
Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors.
Biotechnology for Biofuels 11: 167.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Journal Article | PUB-ID: 2916929
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A (2018)
Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants.
Microbial Biotechnology 11(4): 667-679.
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2018 | Journal Article | PUB-ID: 2920275
Sommermann L, Geistlinger J, Wibberg D, Deubel A, Zwanzig J, Babin D, Schlüter A, Schellenberg I (2018)
Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing.
PLOS ONE 13(4): 32.
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2018 | Journal Article | PUB-ID: 2920173
Wibberg D, Salto IP, Eikmeyer FG, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2018)
Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11.
Antimicrobial Agents and Chemotherapy 62(5): e00212-18.
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2018 | Journal Article | PUB-ID: 2917037
Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A (2018)
Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome.
JOURNAL OF BIOTECHNOLOGY 267: 12-18.
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2018 | Journal Article | PUB-ID: 2920170
Hassa J, Maus I, Off S, Pühler A, Scherer P, Klocke M, Schlüter A (2018)
Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants.
Applied Microbiology and Biotechnology 102(12): 5045-5063.
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2018 | Journal Article | PUB-ID: 2920168
Tomazetto G, Hahnke S, Wibberg D, Pühler A, Klocke M, Schlüter A (2018)
Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions.
Biotechnology Reports 18: e00254.
PUB | DOI
 
2018 | Journal Article | PUB-ID: 2920169
Salto IP, Torres Tejerizo G, Wibberg D, Pühler A, Schlüter A, Pistorio M (2018)
Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats.
Scientific Reports 8(1): 7783.
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2018 | Journal Article | PUB-ID: 2918205
Pechtl A, Rückert C, Maus I, Koeck DE, Trushina N, Kornberger P, Schwarz WH, Schlüter A, Liebl W, Zverlov VV (2018)
Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing.
Genome Announcements 6(6): e01493-17.
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2017 | Journal Article | PUB-ID: 2913556
Jünemann S, Kleinbölting N, Jaenicke S, Henke C, Hassa J, Nelkner J, Stolze Y, Albaum S, Schlüter A, Goesmann A, Sczyrba A, Stoye J (2017)
Bioinformatics for NGS-based metagenomics and the application to biogas research.
Journal of Biotechnology 261(SI): 10-23.
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2017 | Journal Article | PUB-ID: 2911007
Ampattu BJ, Hagmann L, Liang C, Dittrich M, Schlüter A, Blom J, Krol E, Goesmann A, Becker A, Dandekar T, Mueller T, Schoen C (2017)
Transcriptomic buffering of cryptic genetic variation contributes to meningococcal virulence.
BMC Genomics 18: 282.
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2017 | Journal Article | PUB-ID: 2916490
Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A (2017)
Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3.
Archives of Microbiology 199(7): 1065-1068.
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2017 | Journal Article | PUB-ID: 2908419
Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T.
Genome Announcements 5(4): e01513-16.
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2017 | Journal Article | PUB-ID: 2916470
Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A (2017)
The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor.
Journal of Biotechnology 257: 178-186.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Journal Article | PUB-ID: 2910369
Maus I, Kim YS, Wibberg D, Stolze Y, Off S, Antonczyk S, Pühler A, Scherer P, Schlüter A (2017)
Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis.
Journal of Microbiology and Biotechnology 27(2): 321-334.
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2017 | Journal Article | PUB-ID: 2911777
Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste.
Journal of Biotechnology 247: 1-5.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Journal Article | PUB-ID: 2916406
Lasek R, Dziewit L, Ciok A, Decewicz P, Romaniuk K, Jedrys Z, Wibberg D, Schlüter A, Pühler A, Bartosik D (2017)
Genome content, metabolic pathways and biotechnological potential of the psychrophilic Arctic bacterium Psychrobacter sp DAB_AL43B, a source and a host of novel Psychrobacter-specific vectors.
Journal of Biotechnology 263: 64-74.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Journal Article | PUB-ID: 2916435
Czarnecki J, Dziewit L, Puzyna M, Prochwicz E, Tudek A, Wibberg D, Schlüter A, Pühler A, Bartosik D (2017)
Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685.
Environmental Microbiology 19(11): 4536-4550.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Journal Article | PUB-ID: 2910373
Bartholomäus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2017)
Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales.
Archives of Virology 162(2): 555-559.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Journal Article | PUB-ID: 2915516
Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, Off S, Stantscheff R, Zverlov VV, Schwarz WH, König H, Liebl W, Scherer P, McHardy AC, Sczyrba A, Klocke M, Pühler A, Schlüter A (2017)
Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.
Biotechnology for Biofuels 10(1): 264.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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