Understanding metabolite transport and metabolism in C-4 plants through RNA-seq

Schlueter U, Denton AK, Bräutigam A (2016)
Current Opinion in Plant Biology 31: 83-90.

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RNA-seq, the measurement of steady-state RNA levels by next generation sequencing, has enabled quantitative transcriptome analyses of complex traits in many species without requiring the parallel sequencing of their genomes. The complex trait of C-4 photosynthesis, which increases photosynthetic efficiency via a biochemical pump that concentrates CO2 around RubisCO, has evolved convergently multiple times. Due to these interesting properties, C-4 photosynthesis has been analyzed in a series of comparative RNA-seq projects. These projects compared both species with and without the C-4 trait and different tissues or organs within a C-4 plant. The RNA-seq studies were evaluated by comparing to earlier single gene studies. The studies confirmed the marked changes expected for C-4 signature genes, but also revealed numerous new players in C-4 metabolism showing that the C-4 cycle is more complex than previously thought, and suggesting modes of integration into the underlying C-3 metabolism.
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Current Opinion in Plant Biology
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31
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83-90
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Schlueter U, Denton AK, Bräutigam A. Understanding metabolite transport and metabolism in C-4 plants through RNA-seq. Current Opinion in Plant Biology. 2016;31:83-90.
Schlueter, U., Denton, A. K., & Bräutigam, A. (2016). Understanding metabolite transport and metabolism in C-4 plants through RNA-seq. Current Opinion in Plant Biology, 31, 83-90. doi:10.1016/j.pbi.2016.03.007
Schlueter, U., Denton, A. K., and Bräutigam, A. (2016). Understanding metabolite transport and metabolism in C-4 plants through RNA-seq. Current Opinion in Plant Biology 31, 83-90.
Schlueter, U., Denton, A.K., & Bräutigam, A., 2016. Understanding metabolite transport and metabolism in C-4 plants through RNA-seq. Current Opinion in Plant Biology, 31, p 83-90.
U. Schlueter, A.K. Denton, and A. Bräutigam, “Understanding metabolite transport and metabolism in C-4 plants through RNA-seq”, Current Opinion in Plant Biology, vol. 31, 2016, pp. 83-90.
Schlueter, U., Denton, A.K., Bräutigam, A.: Understanding metabolite transport and metabolism in C-4 plants through RNA-seq. Current Opinion in Plant Biology. 31, 83-90 (2016).
Schlueter, Urte, Denton, Alisandra K., and Bräutigam, Andrea. “Understanding metabolite transport and metabolism in C-4 plants through RNA-seq”. Current Opinion in Plant Biology 31 (2016): 83-90.
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2017-12-15T10:27:19Z

2 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

The role of alanine and aspartate aminotransferases in C4 photosynthesis.
Schlüter U, Bräutigam A, Droz JM, Schwender J, Weber APM., Plant Biol (Stuttg) (), 2018
PMID: 30126035
De novo Transcriptome Assembly and Comparison of C3, C3-C4, and C4 Species of Tribe Salsoleae (Chenopodiaceae).
Lauterbach M, Schmidt H, Billakurthi K, Hankeln T, Westhoff P, Gowik U, Kadereit G., Front Plant Sci 8(), 2017
PMID: 29184562

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