Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686

Dziewit L, Czarnecki J, Prochwicz E, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
Frontiers in Microbiology 6: 852.

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Abstract / Bemerkung
Paracoccus aminophilus JCM 7686 (Alphaproteobacteria) is a facultative, heterotrophic methylotroph capable of utilizing a wide range of Cl compounds as sole carbon and energy sources. Analysis of the JCM 7686 genome revealed the presence of genes involved in the oxidation of methanol, methylamine, dimethylamine, trimethylamine, N,N-dimethylformamide, and formamide, as well as the serine cycle, which appears to be the only Cl assimilatory pathway in this strain. Many of these genes are located in different extrachromosomal replicons and are not present in the genomes of most members of the genus Paracoccus, which strongly suggests that they have been horizontally acquired. When compared with Paracoccus denitrificans Pd1222 (type strain of the genus Paracoccus), P aminophilus JCM 7686 has many additional methylotrophic capabilities (oxidation of dimethylamine, trimethylamine, N,N-dimethylformamide, the serine cycle), which are determined by the presence of three separate gene clusters. Interestingly, related clusters form compact methylotrophy islands within the genomes of Paracoccus sp. N5 and many marine bacteria of the Roseobacter clade.
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Frontiers in Microbiology
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6
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852
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Dziewit L, Czarnecki J, Prochwicz E, et al. Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology. 2015;6: 852.
Dziewit, L., Czarnecki, J., Prochwicz, E., Wibberg, D., Schlüter, A., Pühler, A., & Bartosik, D. (2015). Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology, 6, 852. doi:10.3389/fmicb.2015.00852
Dziewit, L., Czarnecki, J., Prochwicz, E., Wibberg, D., Schlüter, A., Pühler, A., and Bartosik, D. (2015). Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology 6:852.
Dziewit, L., et al., 2015. Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology, 6: 852.
L. Dziewit, et al., “Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686”, Frontiers in Microbiology, vol. 6, 2015, : 852.
Dziewit, L., Czarnecki, J., Prochwicz, E., Wibberg, D., Schlüter, A., Pühler, A., Bartosik, D.: Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. Frontiers in Microbiology. 6, : 852 (2015).
Dziewit, Lukasz, Czarnecki, Jakub, Prochwicz, Emilia, Wibberg, Daniel, Schlüter, Andreas, Pühler, Alfred, and Bartosik, Dariusz. “Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686”. Frontiers in Microbiology 6 (2015): 852.

6 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Genomic insights into the pathogenicity and environmental adaptability of Enterococcus hirae R17 isolated from pork offered for retail sale.
Peng Z, Li M, Wang W, Liu H, Fanning S, Hu Y, Zhang J, Li F., Microbiologyopen 6(6), 2017
PMID: 28799224
Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685.
Czarnecki J, Dziewit L, Puzyna M, Prochwicz E, Tudek A, Wibberg D, Schlüter A, Pühler A, Bartosik D., Environ Microbiol 19(11), 2017
PMID: 28856785
An oxidative N-demethylase reveals PAS transition from ubiquitous sensor to enzyme.
Ortmayer M, Lafite P, Menon BR, Tralau T, Fisher K, Denkhaus L, Scrutton NS, Rigby SE, Munro AW, Hay S, Leys D., Nature 539(7630), 2016
PMID: 27851736

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