Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation

Geizecler T, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M (2014)
Journal of Biotechnology 192: 59-61.

Journal Article | Published | English

No fulltext has been uploaded

Abstract
The bacterium Peptoniphilus sp. strain ING2-D1G (DSM 28672), a mesophilic and obligate anaerobic bacterium belonging to the order Clostridiales was isolated from a biogas-producing lab-scale completely stirred tank reactor (CSTR) optimized for anaerobic digestion of maize silage in co-fermentation with pig and cattle manure. In this study, the whole genome sequence of Peptoniphilus sp. strain ING2-D1G, a new isolate potentially involved in protein breakdown and acidogenesis during biomass degradation, is reported. The chromosome of this strain is 1.6 Mb in size and encodes genes predicted to be involved in the production of acetate, lactate and butyrate specifying the acidogenic metabolism of the isolate. (C) 2014 Elsevier B.V. All rights reserved.
Publishing Year
ISSN
PUB-ID

Cite this

Geizecler T, Hahnke S, Maus I, et al. Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology. 2014;192:59-61.
Geizecler, T., Hahnke, S., Maus, I., Wibberg, D., Pühler, A., Schlüter, A., & Klocke, M. (2014). Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology, 192, 59-61.
Geizecler, T., Hahnke, S., Maus, I., Wibberg, D., Pühler, A., Schlüter, A., and Klocke, M. (2014). Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology 192, 59-61.
Geizecler, T., et al., 2014. Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology, 192, p 59-61.
T. Geizecler, et al., “Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation”, Journal of Biotechnology, vol. 192, 2014, pp. 59-61.
Geizecler, T., Hahnke, S., Maus, I., Wibberg, D., Pühler, A., Schlüter, A., Klocke, M.: Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation. Journal of Biotechnology. 192, 59-61 (2014).
Geizecler, Tomazetto, Hahnke, Sarah, Maus, Irena, Wibberg, Daniel, Pühler, Alfred, Schlüter, Andreas, and Klocke, Michael. “Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation”. Journal of Biotechnology 192 (2014): 59-61.
This data publication is cited in the following publications:
This publication cites the following data publications:

4 Citations in Europe PMC

Data provided by Europe PubMed Central.

Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase Gene blaNDM-1.
Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Puhler A, Poirel L, Schluter A., Genome Announc 3(5), 2015
PMID: 26358593
Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant.
Maus I, Cibis KG, Wibberg D, Winkler A, Stolze Y, Konig H, Puhler A, Schluter A., J. Biotechnol. 203(), 2015
PMID: 25801333
Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system.
Wibberg D, Rupp O, Jelonek L, Krober M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Puhler A, Schluter A., J. Biotechnol. 203(), 2015
PMID: 25801332
Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.
Hahnke S, Maus I, Wibberg D, Tomazetto G, Puhler A, Klocke M, Schluter A., J. Biotechnol. 193(), 2015
PMID: 25444871

35 References

Data provided by Europe PubMed Central.

Non contiguous-finished genome sequence and description of Peptoniphilus timonensis sp. nov.
Mishra AK, Lagier JC, Robert C, Raoult D, Fournier PE., Stand Genomic Sci 7(1), 2012
PMID: 23449949
Polyphasic analyses of methanogenic archaeal communities in agricultural biogas plants.
Nettmann E, Bergmann I, Pramschufer S, Mundt K, Plogsties V, Herrmann C, Klocke M., Appl. Environ. Microbiol. 76(8), 2010
PMID: 20154117
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing.
Rademacher A, Zakrzewski M, Schluter A, Schonberg M, Szczepanowski R, Goesmann A, Puhler A, Klocke M., FEMS Microbiol. Ecol. 79(3), 2012
PMID: 22126587
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
Schluter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann KH, Krahn I, Krause L, Kromeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Puhler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehover P, Goesmann A., J. Biotechnol. 136(1-2), 2008
PMID: 18597880
454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters.
Sundberg C, Al-Soud WA, Larsson M, Alm E, Yekta SS, Svensson BH, Sorensen SJ, Karlsson A., FEMS Microbiol. Ecol. 85(3), 2013
PMID: 23678985
Bone and joint infections due to anaerobic bacteria: an analysis of 61 cases and review of the literature.
Walter G, Vernier M, Pinelli PO, Million M, Coulange M, Seng P, Stein A., Eur. J. Clin. Microbiol. Infect. Dis. 33(8), 2014
PMID: 24577953
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.
Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Puhler A, Schluter A., J. Biotechnol. 155(1), 2011
PMID: 21329740

Export

0 Marked Publications

Open Data PUB

Web of Science

View record in Web of Science®

Sources

PMID: 25242663
PubMed | Europe PMC

Search this title in

Google Scholar