Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions

Popik OV, Saik OV, Petrovskiy ED, Sommer B, Hofestädt R, Lavrik IN, Ivanisenko VA (2014)
BMC Genomics 15(Suppl 12).

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http://www.biomedcentral.com/1471-2164/15/S12/S7
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Popik OV, Saik OV, Petrovskiy ED, et al. Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics. 2014;15(Suppl 12).
Popik, O. V., Saik, O. V., Petrovskiy, E. D., Sommer, B., Hofestädt, R., Lavrik, I. N., & Ivanisenko, V. A. (2014). Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics, 15(Suppl 12).
Popik, O. V., Saik, O. V., Petrovskiy, E. D., Sommer, B., Hofestädt, R., Lavrik, I. N., and Ivanisenko, V. A. (2014). Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics 15.
Popik, O.V., et al., 2014. Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics, 15(Suppl 12).
O.V. Popik, et al., “Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions”, BMC Genomics, vol. 15, 2014.
Popik, O.V., Saik, O.V., Petrovskiy, E.D., Sommer, B., Hofestädt, R., Lavrik, I.N., Ivanisenko, V.A.: Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics. 15, (2014).
Popik, Olga V., Saik, Olga V., Petrovskiy, Evgeny D., Sommer, Björn, Hofestädt, Ralf, Lavrik, Inna N., and Ivanisenko, Vladimir A. “Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions”. BMC Genomics 15.Suppl 12 (2014).
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20 References

Data provided by Europe PubMed Central.

Modelling and analysis of gene regulatory networks.
Karlebach G, Shamir R., Nat. Rev. Mol. Cell Biol. 9(10), 2008
PMID: 18797474
Network pharmacology: the next paradigm in drug discovery.
Hopkins AL., Nat. Chem. Biol. 4(11), 2008
PMID: 18936753
The efficiency of multi-target drugs: the network approach might help drug design.
Csermely P, Agoston V, Pongor S., Trends Pharmacol. Sci. 26(4), 2005
PMID: 15808341
Metabolic control analysis in drug discovery and disease.
Cascante M, Boros LG, Comin-Anduix B, de Atauri P, Centelles JJ, Lee PW., Nat. Biotechnol. 20(3), 2002
PMID: 11875424
Metabolic network structure determines key aspects of functionality and regulation.
Stelling J, Klamt S, Bettenbrock K, Schuster S, Gilles ED., Nature 420(6912), 2002
PMID: 12432396
Metabolic network flux analysis for engineering plant systems.
Shachar-Hill Y., Curr. Opin. Biotechnol. 24(2), 2013
PMID: 23395406
Advances in flux balance analysis.
Kauffman KJ, Prakash P, Edwards JS., Curr. Opin. Biotechnol. 14(5), 2003
PMID: 14580578
Dynamic simulation of an in vitro multi-enzyme system.
Ishii N, Suga Y, Hagiya A, Watanabe H, Mori H, Yoshino M, Tomita M., FEBS Lett. 581(3), 2007
PMID: 17239859
Robustness and fragility of Boolean models for genetic regulatory networks.
Chaves M, Albert R, Sontag ED., J. Theor. Biol. 235(3), 2005
PMID: 15882705
Petri nets for modelling metabolic pathways: a survey
AUTHOR UNKNOWN, 2010
Steady state analysis of metabolic pathways using Petri nets.
Voss K, Heiner M, Koch I., In Silico Biol. (Gedrukt) 3(3), 2003
PMID: 14700469
AKAP signaling complexes: getting to the heart of the matter.
McConnachie G, Langeberg LK, Scott JD., Trends Mol Med 12(7), 2006
PMID: 16809066
Subcellular localization charts: a new visual methodology for the semi-automatic localization of protein-related data sets
AUTHOR UNKNOWN, 2013
The universal protein resource (UniProt).
UniProt Consortium., Nucleic Acids Res. 36(Database issue), 2008
PMID: 18045787
KEGG: kyoto encyclopedia of genes and genomes.
Kanehisa M, Goto S., Nucleic Acids Res. 28(1), 2000
PMID: 10592173
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.
Szklarczyk D, Franceschini A, Kuhn M, Simonovic M, Roth A, Minguez P, Doerks T, Stark M, Muller J, Bork P, Jensen LJ, von Mering C., Nucleic Acids Res. 39(Database issue), 2011
PMID: 21045058
IntAct--open source resource for molecular interaction data.
Kerrien S, Alam-Faruque Y, Aranda B, Bancarz I, Bridge A, Derow C, Dimmer E, Feuermann M, Friedrichsen A, Huntley R, Kohler C, Khadake J, Leroy C, Liban A, Lieftink C, Montecchi-Palazzi L, Orchard S, Risse J, Robbe K, Roechert B, Thorneycroft D, Zhang Y, Apweiler R, Hermjakob H., Nucleic Acids Res. 35(Database issue), 2007
PMID: 17145710
Associative network discovery (AND)-the computer system for automated reconstruction networks of associative knowledge about molecular-genetic interactions
AUTHOR UNKNOWN, 2008

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