Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system

Fernandes G de C, Trarbach LJ, Bolzan de Campos S, Beneduzi A, Passaglia L (2014)
Research in Microbiology 165: 571-580.

Download
Es wurde kein Volltext hochgeladen. Nur Publikationsnachweis!
Zeitschriftenaufsatz | Veröffentlicht | Englisch
Autor
; ; ; ;
Erscheinungsjahr
Zeitschriftentitel
Research in Microbiology
Band
165
Seite
571-580
ISSN
PUB-ID

Zitieren

Fernandes G de C, Trarbach LJ, Bolzan de Campos S, Beneduzi A, Passaglia L. Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system. Research in Microbiology. 2014;165:571-580.
Fernandes, G. de C., Trarbach, L. J., Bolzan de Campos, S., Beneduzi, A., & Passaglia, L. (2014). Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system. Research in Microbiology, 165, 571-580. doi:10.1016/j.resmic.2014.06.002
Fernandes, G. de C., Trarbach, L. J., Bolzan de Campos, S., Beneduzi, A., and Passaglia, L. (2014). Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system. Research in Microbiology 165, 571-580.
Fernandes, G. de C., et al., 2014. Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system. Research in Microbiology, 165, p 571-580.
G. de C. Fernandes, et al., “Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system”, Research in Microbiology, vol. 165, 2014, pp. 571-580.
Fernandes, G. de C., Trarbach, L.J., Bolzan de Campos, S., Beneduzi, A., Passaglia, L.: Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system. Research in Microbiology. 165, 571-580 (2014).
Fernandes, Gabriela de C., Trarbach, Laura J., Bolzan de Campos, Samanta, Beneduzi, Anelisi, and Passaglia, Luciane. “Alternative nitrogenase and pseudogenes: unique features of the *Paenibacillus riograndensis* nitrogen fixation system”. Research in Microbiology 165 (2014): 571-580.

6 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Glutamine synthetase stabilizes the binding of GlnR to nitrogen fixation gene operators.
Fernandes GC, Hauf K, Sant'Anna FH, Forchhammer K, Passaglia LM., FEBS J 284(6), 2017
PMID: 28109177
How to transform a recalcitrant Paenibacillus strain: From culture medium to restriction barrier.
Bach E, de Carvalho Fernandes G, Passaglia LMP., J Microbiol Methods 131(), 2016
PMID: 27780731
Current knowledge and perspectives of Paenibacillus: a review.
Grady EN, MacDonald J, Liu L, Richman A, Yuan ZC., Microb Cell Fact 15(1), 2016
PMID: 27905924
Complete genome sequence of Paenibacillus riograndensis SBR5(T), a Gram-positive diazotrophic rhizobacterium.
Brito LF, Bach E, Kalinowski J, Rückert C, Wibberg D, Passaglia LM, Wendisch VF., J Biotechnol 207(), 2015
PMID: 25959170

44 References

Daten bereitgestellt von Europe PubMed Central.

Structural Basis of Biological Nitrogen Fixation.
Howard JB, Rees DC., Chem. Rev. 96(7), 1996
PMID: 11848848
Genetic regulation of biological nitrogen fixation.
Dixon R, Kahn D., Nat. Rev. Microbiol. 2(8), 2004
PMID: 15263897
Biosynthesis of the metalloclusters of molybdenum nitrogenase.
Hu Y, Ribbe MW., Microbiol. Mol. Biol. Rev. 75(4), 2011
PMID: 22126998
Biosynthesis of the iron-molybdenum cofactor of nitrogenase.
Rubio LM, Ludden PW., Annu. Rev. Microbiol. 62(), 2008
PMID: 18429691
Genetics and molecular biology of alternative nitrogen fixation systems
Bishop, Annu Rev Plant Physiol Plant Mol Biol 41(), 1990
Diversity of nitrogenase systems in diazotrophs
Zhao, J Integr Plant Biol 48(), 2006
ADP-ribosylation, a mechanism regulating nitrogenase activity.
Nordlund S, Hogbom M., FEBS J. 280(15), 2013
PMID: 23574616
A minimal nitrogen fixation gene cluster from Paenibacillus sp WLY78 enables expression of active nitrogenase in Escherichia coli
Wang, PLoS Genet 9(), 2013
Paenibacillus riograndensis sp. nov., a nitrogen-fixing species isolated from the rhizosphere of Triticum aestivum.
Beneduzi A, Costa PB, Parma M, Melo IS, Bodanese-Zanettini MH, Passaglia LM., Int. J. Syst. Evol. Microbiol. 60(Pt 1), 2009
PMID: 19648317
Genetic and phenotypic diversity of plant-growth-promoting bacilli isolated from wheat fields in southern Brazil.
Beneduzi A, Peres D, da Costa PB, Bodanese Zanettini MH, Passaglia LM., Res. Microbiol. 159(4), 2008
PMID: 18490146
Genome sequence of the diazotrophic Gram-positive rhizobacterium Paenibacillus riograndensis SBR5(T).
Beneduzi A, Campos S, Ambrosini A, de Souza R, Granada C, Costa P, Arruda L, Moreira F, Vargas LK, Weiss V, Tieppo E, Faoro H, de Souza EM, Pedrosa FO, Passaglia LM., J. Bacteriol. 193(22), 2011
PMID: 22038959
Bacillus nitrogen fixers from Brazilian soils
Seldin, Plant Soil 255(), 1983
Improved gfp and inaZ broad-host-range promoter-probe vectors.
Miller WG, Leveau JH, Lindow SE., Mol. Plant Microbe Interact. 13(11), 2000
PMID: 11059491
Methods for quantification of nitrogen fixation associated with gramineae
Boddey, Crit Rev Plant Sci 6(), 1987
A Rapid and sensitive method for the quantitation microgram quantities of protein utilizing the principle of protein-dye binding
Bradford, Anal Biochem 254(), 1976
Selective removal of molybdenum traces from growth media of N2-fixing bacteria.
Schneider K, Muller A, Johannes KU, Diemann E, Kottmann J., Anal. Biochem. 193(2), 1991
PMID: 1908197
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S., Mol. Biol. Evol. 28(10), 2011
PMID: 21546353
MrBayes 3: Bayesian phylogenetic inference under mixed models.
Ronquist F, Huelsenbeck JP., Bioinformatics 19(12), 2003
PMID: 12912839
ARNold: a web tool for the prediction of Rho-independent transcription terminators.
Naville M, Ghuillot-Gaudeffroy A, Marchais A, Gautheret D., RNA Biol 8(1), 2011
PMID: 21282983
Fast folding and comparison of RNA secondary structures
Hofacker, Monatsh Chem 125(), 1994
Detection of alternative nitrogenases in aerobic gram-negative nitrogen-fixing bacteria.
Fallik E, Chan YK, Robson RL., J. Bacteriol. 173(1), 1991
PMID: 1987127
nif gene sequence and arrangement in the endophytic diazotroph Paenibacillus polymyxa strain P2b-2R
Anand, Biol Fertil Soils 49(), 2013
Nitrogen fixation in the clostridia
Chen, 2004
Physical and genetic map of the major nif gene cluster from Azotobacter vinelandii.
Jacobson MR, Brigle KE, Bennett LT, Setterquist RA, Wilson MS, Cash VL, Beynon J, Newton WE, Dean DR., J. Bacteriol. 171(2), 1989
PMID: 2644218
Phylogeny of 16S rRNA and nifH genes and regulation of nitrogenase activity by oxygen and ammonium in the genus Paenibacillus
Xie, Microbiology 81(), 2012
Phylogeny and characterization of three nifH-homologous genes from Paenibacillus azotofixans.
Choo QC, Samian MR, Najimudin N., Appl. Environ. Microbiol. 69(6), 2003
PMID: 12788777
Where are the pseudogenes in bacterial genomes?
Lawrence JG, Hendrix RW, Casjens S., Trends Microbiol. 9(11), 2001
PMID: 11825713
Psi-Phi: exploring the outer limits of bacterial pseudogenes.
Lerat E, Ochman H., Genome Res. 14(11), 2004
PMID: 15479949
Recognizing the pseudogenes in bacterial genomes.
Lerat E, Ochman H., Nucleic Acids Res. 33(10), 2005
PMID: 15933207
Characterization and analysis of nifH genes from Paenibacillus sabinae T27.
Hong Y, Ma Y, Wu L, Maki M, Qin W, Chen S., Microbiol. Res. 167(10), 2012
PMID: 22717371
Characterization of diazotrophs containing Mo-independent nitrogenases, isolated from diverse natural environments.
Betancourt DA, Loveless TM, Brown JW, Bishop PE., Appl. Environ. Microbiol. 74(11), 2008
PMID: 18378646
Organization of potential alternative nitrogenase genes from Clostridium pasteurianum.
Zinoni F, Robson RM, Robson RL., Biochim. Biophys. Acta 1174(1), 1993
PMID: 8334167
Evidence for an alternative nitrogenase in Heliobacterium gestii
KimbleL, FEMS Microbiol Lett 100(), 1992
Transcriptional profiling of nitrogen fixation in Azotobacter vinelandii.
Hamilton TL, Ludwig M, Dixon R, Boyd ES, Dos Santos PC, Setubal JC, Bryant DA, Dean DR, Peters JW., J. Bacteriol. 193(17), 2011
PMID: 21724999

Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®

Quellen

PMID: 24956360
PubMed | Europe PMC

Suchen in

Google Scholar