Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100

Schatschneider S, Persicke M, Watt T, Hublik G, Pühler A, Niehaus K, Vorhölter F-J (2013)
Journal of Biotechnology 167(2): 123-134.

Journal Article | Published | English

No fulltext has been uploaded

Publishing Year
ISSN
PUB-ID

Cite this

Schatschneider S, Persicke M, Watt T, et al. Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100. Journal of Biotechnology. 2013;167(2):123-134.
Schatschneider, S., Persicke, M., Watt, T., Hublik, G., Pühler, A., Niehaus, K., & Vorhölter, F. - J. (2013). Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100. Journal of Biotechnology, 167(2), 123-134.
Schatschneider, S., Persicke, M., Watt, T., Hublik, G., Pühler, A., Niehaus, K., and Vorhölter, F. - J. (2013). Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100. Journal of Biotechnology 167, 123-134.
Schatschneider, S., et al., 2013. Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100. Journal of Biotechnology, 167(2), p 123-134.
S. Schatschneider, et al., “Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100”, Journal of Biotechnology, vol. 167, 2013, pp. 123-134.
Schatschneider, S., Persicke, M., Watt, T., Hublik, G., Pühler, A., Niehaus, K., Vorhölter, F.-J.: Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100. Journal of Biotechnology. 167, 123-134 (2013).
Schatschneider, Sarah, Persicke, Marcus, Watt, Tony, Hublik, Gerd, Pühler, Alfred, Niehaus, Karsten, and Vorhölter, Frank-Jörg. “Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100”. Journal of Biotechnology 167.2 (2013): 123-134.
This data publication is cited in the following publications:
This publication cites the following data publications:

4 Citations in Europe PMC

Data provided by Europe PubMed Central.

Systems Biology of Microbial Exopolysaccharides Production.
Ates O., Front Bioeng Biotechnol 3(), 2015
PMID: 26734603
Bacterial exopolysaccharides: biosynthesis pathways and engineering strategies.
Schmid J, Sieber V, Rehm B., Front Microbiol 6(), 2015
PMID: 26074894
Genome-scale metabolic reconstruction and constraint-based modelling of the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125.
Fondi M, Maida I, Perrin E, Mellera A, Mocali S, Parrilli E, Tutino ML, Lio P, Fani R., Environ. Microbiol. 17(3), 2015
PMID: 24889559
Characterization of the pyrophosphate-dependent 6-phosphofructokinase from Xanthomonas campestris pv. campestris.
Frese M, Schatschneider S, Voss J, Vorholter FJ, Niehaus K., Arch. Biochem. Biophys. 546(), 2014
PMID: 24508689

98 References

Data provided by Europe PubMed Central.

CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks.
Schneider J, Vorholter FJ, Trost E, Blom J, Musa YR, Neuweger H, Niehaus K, Schatschneider S, Tauch A, Goesmann A., Genet. Mol. Res. 9(3), 2010
PMID: 20799163
Analysis of optimality in natural and perturbed metabolic networks.
Segre D, Vitkup D, Church GM., Proc. Natl. Acad. Sci. U.S.A. 99(23), 2002
PMID: 12415116
Identification of Xanthomonas campestris pv. campestris galactose utilization genes from transcriptome data.
Serrania J, Vorholter FJ, Niehaus K, Puhler A, Becker A., J. Biotechnol. 135(3), 2008
PMID: 18538881
The influence of acetyl and pyruvate substituents on the helix-coil transition behaviour of xanthan
Shatwell, Carbohydrate Research 206(), 1990
Towards a genome-scale kinetic model of cellular metabolism.
Smallbone K, Simeonidis E, Swainston N, Mendes P., BMC Syst Biol 4(), 2010
PMID: 20109182
Functional characterization of the Xcs and Xps type II secretion systems from the plant pathogenic bacterium Xanthomonas campestris pv vesicatoria.
Szczesny R, Jordan M, Schramm C, Schulz S, Cogez V, Bonas U, Buttner D., New Phytol. 187(4), 2010
PMID: 20524995
Xanthomonas campestris pv. campestris possesses a single gluconeogenic pathway that is required for virulence.
Tang DJ, He YQ, Feng JX, He BR, Jiang BL, Lu GT, Chen B, Tang JL., J. Bacteriol. 187(17), 2005
PMID: 16109965
Genome sequence of Xanthomonas campestris JX, an industrially productive strain for Xanthan gum.
Tao F, Wang X, Ma C, Yang C, Tang H, Gai Z, Xu P., J. Bacteriol. 194(17), 2012
PMID: 22887662
Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to Brassica crops
Vicente, Molecular Plant Pathology 14(), 2012
The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
Vorholter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Ruckert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Puhler A., J. Biotechnol. 134(1-2), 2008
PMID: 18304669
Glucose metabolism in Xanthomonas campestris
Whitfield, Journal of General Microbiology 128(), 1982
Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model.
Yizhak K, Benyamini T, Liebermeister W, Ruppin E, Shlomi T., Bioinformatics 26(12), 2010
PMID: 20529914
Xanthan induces plant susceptibility by suppressing callose deposition.
Yun MH, Torres PS, El Oirdi M, Rigano LA, Gonzalez-Lamothe R, Marano MR, Castagnaro AP, Dankert MA, Bouarab K, Vojnov AA., Plant Physiol. 141(1), 2006
PMID: 16531487
Comparative glucose catabolism of Xanthomonas species.
Zagallo AC, Wang CH., J. Bacteriol. 93(3), 1967
PMID: 6025434

Export

0 Marked Publications

Open Data PUB

Web of Science

View record in Web of Science®

Sources

PMID: 23395674
PubMed | Europe PMC

Search this title in

Google Scholar