Emerging role for RNA-based regulation in plant immunity

Staiger D, Korneli C, Lummer M, Navarro L (2013)
The New phytologist 197(2): 394-404.

Download
No fulltext has been uploaded. References only!
Journal Article | Original Article | Published | English

No fulltext has been uploaded

Abstract
I. II. III. IV. V. VI. VII. References SUMMARY: Infection by phytopathogenic bacteria triggers massive changes in plant gene expression, which are thought to be mostly a result of transcriptional reprogramming. However, evidence is accumulating that plants additionally use post-transcriptional regulation of immune-responsive mRNAs as a strategic weapon to shape the defense-related transcriptome. Cellular RNA-binding proteins regulate RNA stability, splicing or mRNA export of immune-response transcripts. In particular, mutants defective in alternative splicing of resistance genes exhibit compromised disease resistance. Furthermore, detection of bacterial pathogens induces the differential expression of small non-coding RNAs including microRNAs that impact the host defense transcriptome. Phytopathogenic bacteria in turn have evolved effector proteins to inhibit biogenesis and/or activity of cellular microRNAs. Whereas RNA silencing has long been known as an antiviral defense response, recent findings also reveal a major role of this process in antibacterial defense. Here we review the function of RNA-binding proteins and small RNA-directed post-transcriptional regulation in antibacterial defense. We mainly focus on studies that used the model system Arabidopsis thaliana and also discuss selected examples from other plants.
Publishing Year
ISSN
PUB-ID

Cite this

Staiger D, Korneli C, Lummer M, Navarro L. Emerging role for RNA-based regulation in plant immunity. The New phytologist. 2013;197(2):394-404.
Staiger, D., Korneli, C., Lummer, M., & Navarro, L. (2013). Emerging role for RNA-based regulation in plant immunity. The New phytologist, 197(2), 394-404. doi:10.1111/nph.12022
Staiger, D., Korneli, C., Lummer, M., and Navarro, L. (2013). Emerging role for RNA-based regulation in plant immunity. The New phytologist 197, 394-404.
Staiger, D., et al., 2013. Emerging role for RNA-based regulation in plant immunity. The New phytologist, 197(2), p 394-404.
D. Staiger, et al., “Emerging role for RNA-based regulation in plant immunity”, The New phytologist, vol. 197, 2013, pp. 394-404.
Staiger, D., Korneli, C., Lummer, M., Navarro, L.: Emerging role for RNA-based regulation in plant immunity. The New phytologist. 197, 394-404 (2013).
Staiger, Dorothee, Korneli, Christin, Lummer, Martina, and Navarro, Lionel. “Emerging role for RNA-based regulation in plant immunity”. The New phytologist 197.2 (2013): 394-404.
This data publication is cited in the following publications:
This publication cites the following data publications:

45 Citations in Europe PMC

Data provided by Europe PubMed Central.

Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D., Plant Cell Environ 37(3), 2014
PMID: 23961939
Long noncoding RNAs responsive to Fusarium oxysporum infection in Arabidopsis thaliana.
Zhu QH, Stephen S, Taylor J, Helliwell CA, Wang MB., New Phytol 201(2), 2014
PMID: 24117540
Roles of small RNAs in plant disease resistance.
Yang L, Huang H., J Integr Plant Biol 56(10), 2014
PMID: 24667020
The hnRNP-Q protein LIF2 participates in the plant immune response.
Le Roux C, Del Prete S, Boutet-Mercey S, Perreau F, Balagué C, Roby D, Fagard M, Gaudin V., PLoS One 9(6), 2014
PMID: 24914891
Alternative splicing in plant immunity.
Yang S, Tang F, Zhu H., Int J Mol Sci 15(6), 2014
PMID: 24918296
Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection.
Maudet C, Mano M, Sunkavalli U, Sharan M, Giacca M, Förstner KU, Eulalio A., Nat Commun 5(), 2014
PMID: 25146723
Nonsense-mediated mRNA decay modulates immune receptor levels to regulate plant antibacterial defense.
Gloggnitzer J, Akimcheva S, Srinivasan A, Kusenda B, Riehs N, Stampfl H, Bautor J, Dekrout B, Jonak C, Jiménez-Gómez JM, Parker JE, Riha K., Cell Host Microbe 16(3), 2014
PMID: 25211079
Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants.
Moreno AB, Martínez de Alba AE, Bardou F, Crespi MD, Vaucheret H, Maizel A, Mallory AC., Nucleic Acids Res 41(8), 2013
PMID: 23482394
Alternative splicing is required for RCT1-mediated disease resistance in Medicago truncatula.
Tang F, Yang S, Gao M, Zhu H., Plant Mol Biol 82(4-5), 2013
PMID: 23657790
Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana.
Streitner C, Simpson CG, Shaw P, Danisman S, Brown JW, Staiger D., Plant Signal Behav 8(7), 2013
PMID: 23656882
Impacts of resistance gene genetics, function, and evolution on a durable future.
Michelmore RW, Christopoulou M, Caldwell KS., Annu Rev Phytopathol 51(), 2013
PMID: 23682913
Nitric oxide and reactive oxygen species in plant biotic interactions.
Scheler C, Durner J, Astier J., Curr Opin Plant Biol 16(4), 2013
PMID: 23880111
The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation.
Lyons R, Iwase A, Gänsewig T, Sherstnev A, Duc C, Barton GJ, Hanada K, Higuchi-Takeuchi M, Matsui M, Sugimoto K, Kazan K, Simpson GG, Shirasu K., Sci Rep 3(), 2013
PMID: 24104185
Arabidopsis TNL-WRKY domain receptor RRS1 contributes to temperature-conditioned RPS4 auto-immunity.
Heidrich K, Tsuda K, Blanvillain-Baufumé S, Wirthmueller L, Bautor J, Parker JE., Front Plant Sci 4(), 2013
PMID: 24146667
RNA biology in fungal phytopathogens.
Göhre V, Haag C, Feldbrügge M., PLoS Pathog 9(10), 2013
PMID: 24146612
Changes in RNA Splicing in Developing Soybean (Glycine max) Embryos.
Aghamirzaie D, Nabiyouni M, Fang Y, Klumas C, Heath LS, Grene R, Collakova E., Biology (Basel) 2(4), 2013
PMID: 24833227
The intestinal microbiota interferes with the microRNA response upon oral Listeria infection.
Archambaud C, Sismeiro O, Toedling J, Soubigou G, Bécavin C, Lechat P, Lebreton A, Ciaudo C, Cossart P., MBio 4(6), 2013
PMID: 24327339

94 References

Data provided by Europe PubMed Central.

Comparing signaling mechanisms engaged in pattern-triggered and effector-triggered immunity.
Tsuda K, Katagiri F., Curr. Opin. Plant Biol. 13(4), 2010
PMID: 20471306
Plant disease-resistance proteins and the gene-for-gene concept.
Van der Biezen EA, Jones JD., Trends Biochem. Sci. 23(12), 1998
PMID: 9868361
Putative members of the Arabidopsis Nup107-160 nuclear pore sub-complex contribute to pathogen defense.
Wiermer M, Cheng YT, Imkampe J, Li M, Wang D, Lipka V, Li X., Plant J. 70(5), 2012
PMID: 22288649
DNA methylation mediated by a microRNA pathway.
Wu L, Zhou H, Zhang Q, Zhang J, Ni F, Liu C, Qi Y., Mol. Cell 38(3), 2010
PMID: 20381393
Transportin-SR is required for proper splicing of resistance genes and plant immunity.
Xu S, Zhang Z, Jing B, Gannon P, Ding J, Xu F, Li X, Zhang Y., PLoS Genet. 7(6), 2011
PMID: 21738492
Arabidopsis Argonaute 2 regulates innate immunity via miRNA393(∗)-mediated silencing of a Golgi-localized SNARE gene, MEMB12.
Zhang X, Zhao H, Gao S, Wang WC, Katiyar-Agarwal S, Huang HD, Raikhel N, Jin H., Mol. Cell 42(3), 2011
PMID: 21549312
Disruption of PAMP-induced MAP kinase cascade by a Pseudomonas syringae effector activates plant immunity mediated by the NB-LRR protein SUMM2.
Zhang Z, Wu Y, Gao M, Zhang J, Kong Q, Liu Y, Ba H, Zhou J, Zhang Y., Cell Host Microbe 11(3), 2012
PMID: 22423965
The Arabidopsis nucleotidyl transferase HESO1 uridylates unmethylated small RNAs to trigger their degradation.
Zhao Y, Yu Y, Zhai J, Ramachandran V, Dinh TT, Meyers BC, Mo B, Chen X., Curr. Biol. 22(8), 2012
PMID: 22464194

Export

0 Marked Publications

Open Data PUB

Web of Science

View record in Web of Science®

Sources

PMID: 23163405
PubMed | Europe PMC

Search this title in

Google Scholar