Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)

Hunger S, Di Gaspero G, Mohring S, Bellin D, Schafer-Pregl R, Borchardt DC, Durel C-E, Werber M, Weisshaar B, Salamini F, Schneider K (2003)
Genome 46(1): 70-82.

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Abstract
Sequence conservation among resistance genes (R genes) was exploited to identify 47 R gene analogues (RGAs) from sugar beet (Beta vulgaris L.). Using degenerate primers, 11 RGAs were amplified from genomic DNA and 7 from leaf or beet cDNA. Twenty-nine were selected from an EST sequencing program. Twenty-one RGAs contained structures similar to the nucleotide binding site (NBS)--leucine rich repeat (LRR) domain, a motif commonly found in several R genes. Among the remaining RGAs, 19 revealed similarity to the serine (threonine) protein kinase domain of R genes, 4 showed features related to the LRR region of the rice disease resistance gene Xa21, 1 RGA resembled the sugar beet nematode resistance gene Hs1pro-1, and 2 had homologies to other gene products associated with disease resistance. For 20 EST-derived RGAs, transcript levels were compared in leaf and root tissue revealing organ-specific transcription in 7 cases. Thirty-three RGAs were spread over all nine sugar beet chromosomes, except for a cluster of nine closely linked RGAs on chromosome 7. The analysis of linkage between RGAs and loci for rhizomania and Cercospora resistance identified alleles associated with resistance in both cases.
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Hunger S, Di Gaspero G, Mohring S, et al. Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome. 2003;46(1):70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D. C., Durel, C. - E., et al. (2003). Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome, 46(1), 70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D. C., Durel, C. - E., Werber, M., Weisshaar, B., Salamini, F., et al. (2003). Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome 46, 70-82.
Hunger, S., et al., 2003. Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome, 46(1), p 70-82.
S. Hunger, et al., “Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)”, Genome, vol. 46, 2003, pp. 70-82.
Hunger, S., Di Gaspero, G., Mohring, S., Bellin, D., Schafer-Pregl, R., Borchardt, D.C., Durel, C.-E., Werber, M., Weisshaar, B., Salamini, F., Schneider, K.: Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.). Genome. 46, 70-82 (2003).
Hunger, Sandra, Di Gaspero, Gabriele, Mohring, Slike, Bellin, Diana, Schafer-Pregl, Ralf, Borchardt, Dietrich C, Durel, Charles-Eric, Werber, Martin, Weisshaar, Bernd, Salamini, Francesco, and Schneider, Katharina. “Isolation and linkage analysis of expressed disease-resistance gene analogues of sugar beet (Beta vulgaris L.)”. Genome 46.1 (2003): 70-82.
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Data provided by Europe PubMed Central.

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PMID: 26647370
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Liu Z, Feng S, Pandey MK, Chen X, Culbreath AK, Varshney RK, Guo B., J Integr Plant Biol 55(5), 2013
PMID: 23384141
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SCHMIDT KLAUS, PFLUGMACHER MAIKE, KLAGES SIMONE, MASER ANJA, MOCK ANDREA, STAHL DIETMARJ., Mol. Plant Pathol. 9(5), 2008
PMID: IND44089693
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Zhang C-L, Xu D-C, Jiang X-C, Zhou Y, Cui J, Zhang C-X, Chen D-F, Fowler MR, Elliott MC, Scott NW, Dewar AM, Slater A., Ann. Appl. Biol. 152(2), 2008
PMID: IND44036241
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Schneider K, Kulosa D, Soerensen TR, Mohring S, Heine M, Durstewitz G, Polley A, Weber E, Jamsari , Lein J, Hohmann U, Tahiro E, Weisshaar B, Schulz B, Koch G, Jung C, Ganal M., Theor. Appl. Genet. 115(5), 2007
PMID: 17622508
Resistance gene analogues are clustered on chromosome 3 of sugar beet and cosegregate with QTL for rhizomania resistance.
Lein JC, Asbach K, Tian Y, Schulte D, Li C, Koch G, Jung C, Cai D., Genome 50(1), 2007
PMID: 17546072
Genome-wide isolation of resistance gene analogs in maize (Zea mays L.).
Wenkai X, Mingliang X, Jiuren Z, Fengge W, Jiansheng L, Jingrui D., Theor. Appl. Genet. 113(1), 2006
PMID: 16607513
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Park TH, Gros J, Sikkema A, Vleeshouwers VG, Muskens M, Allefs S, Jacobsen E, Visser RG, van der Vossen EA., Mol. Plant Microbe Interact. 18(7), 2005
PMID: 16042018
Mapping quantitative trait loci and expressed sequence tags related to brown planthopper resistance in rice.
Ren X, Wang X, Yuan H, Weng Q, Zhu L, He G., Plant Breed. 123(4), 2004
PMID: IND43642668
Sugarbeet leaf spot disease (Cercospora beticola Sacc.)
Weiland John, Koch Georg., Mol. Plant Pathol. 5(3), 2004
PMID: IND43627820

31 References

Data provided by Europe PubMed Central.

High resolution cosmid and P1 maps spanning the 14 Mb genome of the fission yeast S. pombe.
Hoheisel JD, Maier E, Mott R, McCarthy L, Grigoriev AV, Schalkwyk LC, Nizetic D, Francis F, Lehrach H., Cell 73(1), 1993
PMID: 8462094
Molecular identification and isolation of the Waxy locus in maize.
Shure M, Wessler S, Fedoroff N., Cell 35(1), 1983
PMID: 6313224
BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences.
Tatusova TA, Madden TL., FEMS Microbiol. Lett. 174(2), 1999
PMID: 10339815
Integration of AFLP markers into a linkage map of sugar beet (Beta vulgaris L.).
Schondelmaier J, Steinrucken G, Jung C., Plant Breed. 115(4), 1996
PMID: IND20559576
The characterization of cDNA clones coding for wheat storage proteins.
Bartels D, Thompson RD., Nucleic Acids Res. 11(10), 1983
PMID: 6190127

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