On the Similarity of Sets of Permutations and its Applications to Genome Comparison

Bergeron A, Stoye J (2003) Forschungsberichte.
Bielefeld: Technische Fakultät der Universität Bielefeld.

Download
OA
Report | Englisch
Autor
;
Abstract / Bemerkung
The comparison of genomes with the same gene content relies on our ability to compare permutations, either by measuring how much they differ, or by measuring how much they are alike. With the notable exception of the breakpoint distance, which is based on the concept of conserved adjacencies, measures of distance do not generalize easily to sets of more than two permutations. In this paper, we present a basic unifying notion, conserved intervals, as a powerful generalization of adjacencies, and as a key feature of genome rearrangement theories. We also show that sets of conserved intervals have elegant nesting and chaining properties that allow the development of compact graphic representations, and linear time algorithms to manipulate them.
Erscheinungsjahr
PUB-ID

Zitieren

Bergeron A, Stoye J. On the Similarity of Sets of Permutations and its Applications to Genome Comparison. Forschungsberichte. Bielefeld: Technische Fakultät der Universität Bielefeld; 2003.
Bergeron, A., & Stoye, J. (2003). On the Similarity of Sets of Permutations and its Applications to Genome Comparison (Forschungsberichte). Bielefeld: Technische Fakultät der Universität Bielefeld.
Bergeron, A., and Stoye, J. (2003). On the Similarity of Sets of Permutations and its Applications to Genome Comparison. Forschungsberichte, Bielefeld: Technische Fakultät der Universität Bielefeld.
Bergeron, A., & Stoye, J., 2003. On the Similarity of Sets of Permutations and its Applications to Genome Comparison, Forschungsberichte, Bielefeld: Technische Fakultät der Universität Bielefeld.
A. Bergeron and J. Stoye, On the Similarity of Sets of Permutations and its Applications to Genome Comparison, Forschungsberichte, Bielefeld: Technische Fakultät der Universität Bielefeld, 2003.
Bergeron, A., Stoye, J.: On the Similarity of Sets of Permutations and its Applications to Genome Comparison. Forschungsberichte. Technische Fakultät der Universität Bielefeld, Bielefeld (2003).
Bergeron, Anne, and Stoye, Jens. On the Similarity of Sets of Permutations and its Applications to Genome Comparison. Bielefeld: Technische Fakultät der Universität Bielefeld, 2003. Forschungsberichte.
Alle Dateien verfügbar unter der/den folgenden Lizenz(en):
Copyright Statement:
This Item is protected by copyright and/or related rights. [...]
Volltext(e)
Access Level
OA Open Access
Zuletzt Hochgeladen
1970-01-01T00:00:00Z

Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Suchen in

Google Scholar