CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks

Schneider J, Vorhölter F-J, Trost E, Blom J, Musa YR, Neuweger H, Niehaus K, Schatschneider S, Tauch A, Goesmann A (2010)
Genetics and Molecular Research 9(3): 1660-1672.

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Schneider J, Vorhölter F-J, Trost E, et al. CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research. 2010;9(3):1660-1672.
Schneider, J., Vorhölter, F. - J., Trost, E., Blom, J., Musa, Y. R., Neuweger, H., Niehaus, K., et al. (2010). CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research, 9(3), 1660-1672.
Schneider, J., Vorhölter, F. - J., Trost, E., Blom, J., Musa, Y. R., Neuweger, H., Niehaus, K., Schatschneider, S., Tauch, A., and Goesmann, A. (2010). CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research 9, 1660-1672.
Schneider, J., et al., 2010. CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research, 9(3), p 1660-1672.
J. Schneider, et al., “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”, Genetics and Molecular Research, vol. 9, 2010, pp. 1660-1672.
Schneider, J., Vorhölter, F.-J., Trost, E., Blom, J., Musa, Y.R., Neuweger, H., Niehaus, K., Schatschneider, S., Tauch, A., Goesmann, A.: CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research. 9, 1660-1672 (2010).
Schneider, Jessica, Vorhölter, Frank-Jörg, Trost, Eva, Blom, Jochen, Musa, Y. R., Neuweger, Heiko, Niehaus, Karsten, Schatschneider, Sarah, Tauch, Andreas, and Goesmann, Alexander. “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”. Genetics and Molecular Research 9.3 (2010): 1660-1672.
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8 Citations in Europe PMC

Data provided by Europe PubMed Central.

D-Xylose assimilation via the Weimberg pathway by solvent-tolerant Pseudomonas taiwanensis VLB120.
Kohler KA, Blank LM, Frick O, Schmid A., Environ. Microbiol. 17(1), 2015
PMID: 24934825
Establishment, in silico analysis, and experimental verification of a large-scale metabolic network of the xanthan producing Xanthomonas campestris pv. campestris strain B100.
Schatschneider S, Persicke M, Watt SA, Hublik G, Puhler A, Niehaus K, Vorholter FJ., J. Biotechnol. 167(2), 2013
PMID: 23395674
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient.
Schroder J, Maus I, Meyer K, Wordemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A., BMC Genomics 13(), 2012
PMID: 22524407
Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and pneumonia.
Trost E, Blom J, Soares Sde C, Huang IH, Al-Dilaimi A, Schroder J, Jaenicke S, Dorella FA, Rocha FS, Miyoshi A, Azevedo V, Schneider MP, Silva A, Camello TC, Sabbadini PS, Santos CS, Santos LS, Hirata R Jr, Mattos-Guaraldi AL, Efstratiou A, Schmitt MP, Ton-That H, Tauch A., J. Bacteriol. 194(12), 2012
PMID: 22505676
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors.
Trost E, Al-Dilaimi A, Papavasiliou P, Schneider J, Viehoever P, Burkovski A, Soares SC, Almeida SS, Dorella FA, Miyoshi A, Azevedo V, Schneider MP, Silva A, Santos CS, Santos LS, Sabbadini P, Dias AA, Hirata R Jr, Mattos-Guaraldi AL, Tauch A., BMC Genomics 12(), 2011
PMID: 21801446
Pathogenomics of Xanthomonas: understanding bacterium-plant interactions.
Ryan RP, Vorholter FJ, Potnis N, Jones JB, Van Sluys MA, Bogdanove AJ, Dow JM., Nat. Rev. Microbiol. 9(5), 2011
PMID: 21478901
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence.
Trost E, Ott L, Schneider J, Schroder J, Jaenicke S, Goesmann A, Husemann P, Stoye J, Dorella FA, Rocha FS, Soares Sde C, D'Afonseca V, Miyoshi A, Ruiz J, Silva A, Azevedo V, Burkovski A, Guiso N, Join-Lambert OF, Kayal S, Tauch A., BMC Genomics 11(), 2010
PMID: 21192786

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