Browsing RNA Structures by Interactive Sonification

Grond F, Janssen S, Schirmer S, Hermann T (2010)
In: Proceedings of the 3rd Interactive Sonification Workshop. Bresin R, Hermann T, Hunt A (Eds);KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC): 11-16.

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Conference Paper | Published | English
Editor
Bresin, Roberto ; Hermann, Thomas ; Hunt, Andy
Abstract
This paper presents a new interactive sonification technique 1 to browse ribonucleic acid (RNA) secondary structures using a combined auditory and visual interface. 2 Despite the existence of several optimization criteria for RNA sequences, it is still necessary to manually inspect a huge number of the resulting structures in detail. Our first sonifications turn RNA structures into auditory timbre gestalts according to the shape classes they belong to, so that transitions amongst shape classes becomes clearly audible, while scanning over a visual display.
Publishing Year
Conference
ISon 2010 - Interactive Sonification Workshop
Location
KTH, Stockholm, Sweden
Conference Date
2010-04-07
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Grond F, Janssen S, Schirmer S, Hermann T. Browsing RNA Structures by Interactive Sonification. In: Bresin R, Hermann T, Hunt A, eds. Proceedings of the 3rd Interactive Sonification Workshop. KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC); 2010: 11-16.
Grond, F., Janssen, S., Schirmer, S., & Hermann, T. (2010). Browsing RNA Structures by Interactive Sonification. In R. Bresin, T. Hermann, & A. Hunt (Eds.), Proceedings of the 3rd Interactive Sonification Workshop (pp. 11-16). KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC).
Grond, F., Janssen, S., Schirmer, S., and Hermann, T. (2010). “Browsing RNA Structures by Interactive Sonification” in Proceedings of the 3rd Interactive Sonification Workshop, ed. R. Bresin, T. Hermann, and A. Hunt (KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), 11-16.
Grond, F., et al., 2010. Browsing RNA Structures by Interactive Sonification. In R. Bresin, T. Hermann, & A. Hunt, eds. Proceedings of the 3rd Interactive Sonification Workshop. KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), pp. 11-16.
F. Grond, et al., “Browsing RNA Structures by Interactive Sonification”, Proceedings of the 3rd Interactive Sonification Workshop, R. Bresin, T. Hermann, and A. Hunt, eds., KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), 2010, pp.11-16.
Grond, F., Janssen, S., Schirmer, S., Hermann, T.: Browsing RNA Structures by Interactive Sonification. In: Bresin, R., Hermann, T., and Hunt, A. (eds.) Proceedings of the 3rd Interactive Sonification Workshop. p. 11-16. KTH School of Computer Science and Communication (CSC), KTH, Stockholm, Sweden (2010).
Grond, Florian, Janssen, Stefan, Schirmer, Stefanie, and Hermann, Thomas. “Browsing RNA Structures by Interactive Sonification”. Proceedings of the 3rd Interactive Sonification Workshop. Ed. Roberto Bresin, Thomas Hermann, and Andy Hunt. KTH, Stockholm, Sweden: KTH School of Computer Science and Communication (CSC), 2010. 11-16.
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Supplementary Material for "Browsing RNA Structures by Interactive Sonification"
Grond F, Janssen S, Schirmer S, Hermann T (2010)
Bielefeld University.
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