Chemical tools for activity-based proteomics

Hagenstein MC, Sewald N (2006)
J Biotechnol 124(1): 56-73.

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Abstract / Bemerkung
Several approaches for proteome analysis and the generation of proteome subsets rely on engineered chemical probes that are tailored towards the detection of different protein classes. The concepts are presented in this review covering the literature until mid-2005.
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Zeitschriftentitel
J Biotechnol
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124
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1
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56-73
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Hagenstein MC, Sewald N. Chemical tools for activity-based proteomics. J Biotechnol. 2006;124(1):56-73.
Hagenstein, M. C., & Sewald, N. (2006). Chemical tools for activity-based proteomics. J Biotechnol, 124(1), 56-73. doi:10.1016/j.jbiotec.2005.12.005
Hagenstein, M. C., and Sewald, N. (2006). Chemical tools for activity-based proteomics. J Biotechnol 124, 56-73.
Hagenstein, M.C., & Sewald, N., 2006. Chemical tools for activity-based proteomics. J Biotechnol, 124(1), p 56-73.
M.C. Hagenstein and N. Sewald, “Chemical tools for activity-based proteomics”, J Biotechnol, vol. 124, 2006, pp. 56-73.
Hagenstein, M.C., Sewald, N.: Chemical tools for activity-based proteomics. J Biotechnol. 124, 56-73 (2006).
Hagenstein, Miriam C, and Sewald, Norbert. “Chemical tools for activity-based proteomics”. J Biotechnol 124.1 (2006): 56-73.

28 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Rational Development of Novel Activity Probes for the Analysis of Human Cytochromes P450.
Sellars JD, Skipsey M, Sadr-Ul-Shaheed, Gravell S, Abumansour H, Kashtl G, Irfan J, Khot M, Pors K, Patterson LH, Sutton CW., ChemMedChem 11(11), 2016
PMID: 27154431
Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue.
Chen W, Dong J, Plate L, Mortenson DE, Brighty GJ, Li S, Liu Y, Galmozzi A, Lee PS, Hulce JJ, Cravatt BF, Saez E, Powers ET, Wilson IA, Sharpless KB, Kelly JW., J Am Chem Soc 138(23), 2016
PMID: 27191344
Inhibitor-based affinity probes for the investigation of JAK signaling pathways.
Höfener M, Pachl F, Kuster B, Sewald N., Proteomics 15(17), 2015
PMID: 25959371
Evaluation of sulfatase-directed quinone methide traps for proteomics.
Lenger J, Schröder M, Ennemann EC, Müller B, Wong CH, Noll T, Dierks T, Hanson SR, Sewald N., Bioorg Med Chem 20(2), 2012
PMID: 21570853
Labeling and enrichment of Arabidopsis thaliana matrix metalloproteases using an active-site directed, marimastat-based photoreactive probe.
Lenger J, Kaschani F, Lenz T, Dalhoff C, Villamor JG, Köster H, Sewald N, van der Hoorn RA., Bioorg Med Chem 20(2), 2012
PMID: 21775155
Glycine fluoromethylketones as SENP-specific activity based probes.
Dobrotă C, Fasci D, Hădade ND, Roiban GD, Pop C, Meier VM, Dumitru I, Matache M, Salvesen GS, Funeriu DP., Chembiochem 13(1), 2012
PMID: 22134988
Rationale for the development of 2-aminobenzamide histone deacetylase inhibitors as therapeutics for Friedreich ataxia.
Soragni E, Xu C, Plasterer HL, Jacques V, Rusche JR, Gottesfeld JM., J Child Neurol 27(9), 2012
PMID: 22764181
Qualitative analysis of the fluorophosphonate-based chemical probes using the serine hydrolases from mouse liver and poly-3-hydroxybutyrate depolymerase (PhaZ) from Bacillus thuringiensis.
Huang YL, Chung TW, Chang CM, Chen CH, Liao CC, Tsay YG, Shaw GC, Liaw SH, Sun CM, Lin CH., Anal Bioanal Chem 404(8), 2012
PMID: 22941070
Cysteine tagging for MS-based proteomics.
Giron P, Dayon L, Sanchez JC., Mass Spectrom Rev 30(3), 2011
PMID: 21500242
Facile and rapid access to linear and truncated microcystin analogues for the implementation of immunoassays.
Clavé G, Ronco C, Boutal H, Kreich N, Volland H, Franck X, Romieu A, Renard PY., Org Biomol Chem 8(3), 2010
PMID: 20090987
Fluorescence quenched quinone methide based activity probes--a cautionary tale.
Sellars JD, Landrum M, Congreve A, Dixon DP, Mosely JA, Beeby A, Edwards R, Steel PG., Org Biomol Chem 8(7), 2010
PMID: 20237672
Mining the active proteome in plant science and biotechnology.
Kołodziejek I, van der Hoorn RA., Curr Opin Biotechnol 21(2), 2010
PMID: 20197235
Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling.
Zhang H, Brown RN, Qian WJ, Monroe ME, Purvine SO, Moore RJ, Gritsenko MA, Shi L, Romine MF, Fredrickson JK, Pasa-Tolić L, Smith RD, Lipton MS., J Proteome Res 9(5), 2010
PMID: 20380418
A universal and ready-to-use heterotrifunctional cross-linking reagent for facile synthetic access to sophisticated bioconjugates.
Clavé G, Volland H, Flaender M, Gasparutto D, Romieu A, Renard PY., Org Biomol Chem 8(19), 2010
PMID: 20694211
The current state of proteomics in GI oncology.
Lin Y, Dynan WS, Lee JR, Zhu ZH, Schade RR., Dig Dis Sci 54(3), 2009
PMID: 19104933
Target profiling of small molecules by chemical proteomics.
Rix U, Superti-Furga G., Nat Chem Biol 5(9), 2009
PMID: 19690537
Chemical probes identify a role for histone deacetylase 3 in Friedreich's ataxia gene silencing.
Xu C, Soragni E, Chou CJ, Herman D, Plasterer HL, Rusche JR, Gottesfeld JM., Chem Biol 16(9), 2009
PMID: 19778726
Affinity-based labeling of cytohesins with a bifunctional SecinH3 photoaffinity probe.
Bi X, Schmitz A, Hayallah AM, Song JN, Famulok M., Angew Chem Int Ed Engl 47(49), 2008
PMID: 18972479
Molecular tools for metalloprotease sub-proteome generation.
Collet M, Lenger J, Jenssen K, Plattner HP, Sewald N., J Biotechnol 129(2), 2007
PMID: 17207876
Probing glycomics.
Timmer MS, Stocker BL, Seeberger PH., Curr Opin Chem Biol 11(1), 2007
PMID: 17208037
The use of proteomics to identify novel therapeutic targets for the treatment of disease.
Moseley FL, Bicknell KA, Marber MS, Brooks G., J Pharm Pharmacol 59(5), 2007
PMID: 17524226
A new chemical probe for the detection of the cancer-linked galectin-3.
Ballell L, van Scherpenzeel M, Buchalova K, Liskamp RM, Pieters RJ., Org Biomol Chem 4(23), 2006
PMID: 17102885

92 References

Daten bereitgestellt von Europe PubMed Central.

Proteomic profiling of mechanistically distinct enzyme classes using a common chemotype.
Adam GC, Sorensen EJ, Cravatt BF., Nat. Biotechnol. 20(8), 2002
PMID: 12091914
Chemical strategies for functional proteomics.
Adam GC, Sorensen EJ, Cravatt BF., Mol. Cell Proteomics 1(10), 2002
PMID: 12438561
Profiling the specific reactivity of the proteome with non-directed activity-based probes.
Adam GC, Cravatt BF, Sorensen EJ., Chem. Biol. 8(1), 2001
PMID: 11182321
Mapping enzyme active sites in complex proteomes.
Adam GC, Burbaum J, Kozarich JW, Patricelli MP, Cravatt BF., J. Am. Chem. Soc. 126(5), 2004
PMID: 14759193
A new chemical probe for proteomics of carbohydrate-binding proteins.
Ballell L, Alink KJ, Slijper M, Versluis C, Liskamp RM, Pieters RJ., Chembiochem 6(2), 2005
PMID: 15578642
Discovering disease-associated enzymes by proteome reactivity profiling.
Barglow KT, Cravatt BF., Chem. Biol. 11(11), 2004
PMID: 15556003
Selective targeting of lysosomal cysteine proteases with radiolabeled electrophilic substrate analogs.
Bogyo M, Verhelst S, Bellingard-Dubouchaud V, Toba S, Greenbaum D., Chem. Biol. 7(1), 2000
PMID: 10662686
Proteome-wide identification of cellular targets affected by bisindolylmaleimide-type protein kinase C inhibitors.
Brehmer D, Godl K, Zech B, Wissing J, Daub H., Mol. Cell Proteomics 3(5), 2004
PMID: 14769951
Cellular targets of gefitinib.
Brehmer D, Greff Z, Godl K, Blencke S, Kurtenbach A, Weber M, Muller S, Klebl B, Cotten M, Keri G, Wissing J, Daub H., Cancer Res. 65(2), 2005
PMID: 15695376
Enrichment and analysis of peptide subsets using fluorous affinity tags and mass spectrometry.
Brittain SM, Ficarro SB, Brock A, Peters EC., Nat. Biotechnol. 23(4), 2005
PMID: 15768030
Developing photoactive affinity probes for proteomic profiling: hydroxamate-based probes for metalloproteases.
Chan EW, Chattopadhaya S, Panicker RC, Huang X, Yao SQ., J. Am. Chem. Soc. 126(44), 2004
PMID: 15521763
An affinity based probe for the proteomic profiling of aspartic proteases
Chattopadhaya, Tetrahedron Lett. 46(), 2005
Evaluation of kinase inhibitor selectivity by chemical proteomics.
Daub H, Godl K, Brehmer D, Klebl B, Muller G., Assay Drug Dev Technol 2(2), 2004
PMID: 15165517
Using photolabile ligands in drug discovery and development.
Dorman G, Prestwich GD., Trends Biotechnol. 18(2), 2000
PMID: 10652511
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.
Eng JK, McCormack AL, Yates JR., J. Am. Soc. Mass Spectrom. 5(11), 1994
PMID: c6781
Multiple species of CPP32 and Mch2 are the major active caspases present in apoptotic cells.
Faleiro L, Kobayashi R, Fearnhead H, Lazebnik Y., EMBO J. 16(9), 1997
PMID: 9171342
Chemical reagents in photoaffinity labeling
Fleming, Tetrahedron 51(), 1995
Enzyme family-specific and activity-based screening of chemical libraries using enzyme microarrays.
Funeriu DP, Eppinger J, Denizot L, Miyake M, Miyake J., Nat. Biotechnol. 23(5), 2005
PMID: 15821728
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS.
Gerber SA, Rush J, Stemman O, Kirschner MW, Gygi SP., Proc. Natl. Acad. Sci. U.S.A. 100(12), 2003
PMID: 12771378
Evaluation of two-dimensional differential gel electrophoresis for proteomic expression analysis of a model breast cancer cell system.
Gharbi S, Gaffney P, Yang A, Zvelebil MJ, Cramer R, Waterfield MD, Timms JF., Mol. Cell Proteomics 1(2), 2002
PMID: 12096126
Current two-dimensional electrophoresis technology for proteomics.
Gorg A, Weiss W, Dunn MJ., Proteomics 4(12), 2004
PMID: 15543535
The current state of two-dimensional electrophoresis with immobilized pH gradients.
Gorg A, Postel W, Gunther S., Electrophoresis 9(9), 1988
PMID: 3072185
Epoxide electrophiles as activity-dependent cysteine protease profiling and discovery tools.
Greenbaum D, Medzihradszky KF, Burlingame A, Bogyo M., Chem. Biol. 7(8), 2000
PMID: 11048948
Chemical approaches for functionally probing the proteome.
Greenbaum D, Baruch A, Hayrapetian L, Darula Z, Burlingame A, Medzihradszky KF, Bogyo M., Mol. Cell Proteomics 1(1), 2002
PMID: 12096141
Evaluation of two-dimensional gel electrophoresis-based proteome analysis technology.
Gygi SP, Corthals GL, Zhang Y, Rochon Y, Aebersold R., Proc. Natl. Acad. Sci. U.S.A. 97(17), 2000
PMID: 10920198
Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags.
Gygi SP, Rist B, Griffin TJ, Eng J, Aebersold R., J. Proteome Res. 1(1), 2002
PMID: 12643526
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags.
Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R., Nat. Biotechnol. 17(10), 1999
PMID: 10504701
Affinity-based tagging of protein families with reversible inhibitors: a concept for functional proteomics.
Hagenstein MC, Mussgnug JH, Lotte K, Plessow R, Brockhinke A, Kruse O, Sewald N., Angew. Chem. Int. Ed. Engl. 42(45), 2003
PMID: 14639736
Mass spectrometric analysis of protein mixtures at low levels using cleavable 13C-isotope-coded affinity tag and multidimensional chromatography.
Hansen KC, Schmitt-Ulms G, Chalkley RJ, Hirsch J, Baldwin MA, Burlingame AL., Mol. Cell Proteomics 2(5), 2003
PMID: 12766231
Chemical proteomics and its application to drug discovery.
Jeffery DA, Bogyo M., Curr. Opin. Biotechnol. 14(1), 2003
PMID: 12566007

AUTHOR UNKNOWN, 0
Enzyme activity profiles of the secreted and membrane proteome that depict cancer cell invasiveness.
Jessani N, Liu Y, Humphrey M, Cravatt BF., Proc. Natl. Acad. Sci. U.S.A. 99(16), 2002
PMID: 12149457
Activity-based probes that target diverse cysteine protease families.
Kato D, Boatright KM, Berger AB, Nazif T, Blum G, Ryan C, Chehade KA, Salvesen GS, Bogyo M., Nat. Chem. Biol. 1(1), 2005
PMID: 16407991
Profiling serine hydrolase activities in complex proteomes.
Kidd D, Liu Y, Cravatt BF., Biochemistry 40(13), 2001
PMID: 11300781
Active site-directed protein regulation.
Kobe B, Kemp BE., Nature 402(6760), 1999
PMID: 10586874
Click Chemistry: Diverse Chemical Function from a Few Good Reactions.
Kolb HC, Finn MG, Sharpless KB., Angew. Chem. Int. Ed. Engl. 40(11), 2001
PMID: 11433435
Activity-based probes for protein tyrosine phosphatases.
Kumar S, Zhou B, Liang F, Wang WQ, Huang Z, Zhang ZY., Proc. Natl. Acad. Sci. U.S.A. 101(21), 2004
PMID: 15148367
Protein microarrays as tools for functional proteomics.
LaBaer J, Ramachandran N., Curr Opin Chem Biol 9(1), 2005
PMID: 15701447
Initial sequencing and analysis of the human genome.
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, Kann L, Lehoczky J, LeVine R, McEwan P, McKernan K, Meldrim J, Mesirov JP, Miranda C, Morris W, Naylor J, Raymond C, Rosetti M, Santos R, Sheridan A, Sougnez C, Stange-Thomann Y, Stojanovic N, Subramanian A, Wyman D, Rogers J, Sulston J, Ainscough R, Beck S, Bentley D, Burton J, Clee C, Carter N, Coulson A, Deadman R, Deloukas P, Dunham A, Dunham I, Durbin R, French L, Grafham D, Gregory S, Hubbard T, Humphray S, Hunt A, Jones M, Lloyd C, McMurray A, Matthews L, Mercer S, Milne S, Mullikin JC, Mungall A, Plumb R, Ross M, Shownkeen R, Sims S, Waterston RH, Wilson RK, Hillier LW, McPherson JD, Marra MA, Mardis ER, Fulton LA, Chinwalla AT, Pepin KH, Gish WR, Chissoe SL, Wendl MC, Delehaunty KD, Miner TL, Delehaunty A, Kramer JB, Cook LL, Fulton RS, Johnson DL, Minx PJ, Clifton SW, Hawkins T, Branscomb E, Predki P, Richardson P, Wenning S, Slezak T, Doggett N, Cheng JF, Olsen A, Lucas S, Elkin C, Uberbacher E, Frazier M, Gibbs RA, Muzny DM, Scherer SE, Bouck JB, Sodergren EJ, Worley KC, Rives CM, Gorrell JH, Metzker ML, Naylor SL, Kucherlapati RS, Nelson DL, Weinstock GM, Sakaki Y, Fujiyama A, Hattori M, Yada T, Toyoda A, Itoh T, Kawagoe C, Watanabe H, Totoki Y, Taylor T, Weissenbach J, Heilig R, Saurin W, Artiguenave F, Brottier P, Bruls T, Pelletier E, Robert C, Wincker P, Smith DR, Doucette-Stamm L, Rubenfield M, Weinstock K, Lee HM, Dubois J, Rosenthal A, Platzer M, Nyakatura G, Taudien S, Rump A, Yang H, Yu J, Wang J, Huang G, Gu J, Hood L, Rowen L, Madan A, Qin S, Davis RW, Federspiel NA, Abola AP, Proctor MJ, Myers RM, Schmutz J, Dickson M, Grimwood J, Cox DR, Olson MV, Kaul R, Raymond C, Shimizu N, Kawasaki K, Minoshima S, Evans GA, Athanasiou M, Schultz R, Roe BA, Chen F, Pan H, Ramser J, Lehrach H, Reinhardt R, McCombie WR, de la Bastide M, Dedhia N, Blocker H, Hornischer K, Nordsiek G, Agarwala R, Aravind L, Bailey JA, Bateman A, Batzoglou S, Birney E, Bork P, Brown DG, Burge CB, Cerutti L, Chen HC, Church D, Clamp M, Copley RR, Doerks T, Eddy SR, Eichler EE, Furey TS, Galagan J, Gilbert JG, Harmon C, Hayashizaki Y, Haussler D, Hermjakob H, Hokamp K, Jang W, Johnson LS, Jones TA, Kasif S, Kaspryzk A, Kennedy S, Kent WJ, Kitts P, Koonin EV, Korf I, Kulp D, Lancet D, Lowe TM, McLysaght A, Mikkelsen T, Moran JV, Mulder N, Pollara VJ, Ponting CP, Schuler G, Schultz J, Slater G, Smit AF, Stupka E, Szustakowki J, Thierry-Mieg D, Thierry-Mieg J, Wagner L, Wallis J, Wheeler R, Williams A, Wolf YI, Wolfe KH, Yang SP, Yeh RF, Collins F, Guyer MS, Peterson J, Felsenfeld A, Wetterstrand KA, Patrinos A, Morgan MJ, de Jong P, Catanese JJ, Osoegawa K, Shizuya H, Choi S, Chen YJ, Szustakowki J; International Human Genome Sequencing Consortium., Nature 409(6822), 2001
PMID: 11237011
Click chemistry in situ: acetylcholinesterase as a reaction vessel for the selective assembly of a femtomolar inhibitor from an array of building blocks.
Lewis WG, Green LG, Grynszpan F, Radic Z, Carlier PR, Taylor P, Finn MG, Sharpless KB., Angew. Chem. Int. Ed. Engl. 41(6), 2002
PMID: 12491310
Photoactivated gamma-secretase inhibitors directed to the active site covalently label presenilin 1.
Li YM, Xu M, Lai MT, Huang Q, Castro JL, DiMuzio-Mower J, Harrison T, Lellis C, Nadin A, Neduvelil JG, Register RB, Sardana MK, Shearman MS, Smith AL, Shi XP, Yin KC, Shafer JA, Gardell SJ., Nature 405(6787), 2000
PMID: 10864326
Design and synthesis of an affinity probe that targets caspases in proteomic experiments
Liau, Tetrahedron Lett. 44(), 2003
Direct analysis of protein complexes using mass spectrometry.
Link AJ, Eng J, Schieltz DM, Carmack E, Mize GJ, Morris DR, Garvik BM, Yates JR 3rd., Nat. Biotechnol. 17(7), 1999
PMID: 10404161
Activity-based protein profiling: the serine hydrolases.
Liu Y, Patricelli MP, Cravatt BF., Proc. Natl. Acad. Sci. U.S.A. 96(26), 1999
PMID: 10611275
Design and synthesis of class-selective activity probes for protein tyrosine phosphatases.
Lo LC, Pang TL, Kuo CH, Chiang YL, Wang HY, Lin JJ., J. Proteome Res. 1(1), 2002
PMID: 12643524
Inhibitor affinity chromatography: profiling the specific reactivity of the proteome with immobilized molecules.
Lolli G, Thaler F, Valsasina B, Roletto F, Knapp S, Uggeri M, Bachi A, Matafora V, Storici P, Stewart A, Kalisz HM, Isacchi A., Proteomics 3(7), 2003
PMID: 12872229
Proteome Analysis: A Pathway to the Functional Analysis of Proteins.
Lottspeich F., Angew. Chem. Int. Ed. Engl. 38(17), 1999
PMID: 10508327
Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags.
Lu Y, Bottari P, Turecek F, Aebersold R, Gelb MH., Anal. Chem. 76(14), 2004
PMID: 15253649
Activation of multiple interleukin-1beta converting enzyme homologues in cytosol and nuclei of HL-60 cells during etoposide-induced apoptosis.
Martins LM, Kottke T, Mesner PW, Basi GS, Sinha S, Frigon N Jr, Tatar E, Tung JS, Bryant K, Takahashi A, Svingen PA, Madden BJ, McCormick DJ, Earnshaw WC, Kaufmann SH., J. Biol. Chem. 272(11), 1997
PMID: 9054443
Comparison of three directly coupled HPLC MS/MS strategies for identification of proteins from complex mixtures: single-dimension LC–MS/MS, 2-phase MudPIT, and 3-phase MudPIT
McDonald, Int. J. Mass Spectrom. 219(), 2002
High resolution two-dimensional electrophoresis of proteins.
O'Farrell PH., J. Biol. Chem. 250(10), 1975
PMID: 236308
High-resolution functional proteomics by active-site peptide profiling.
Okerberg ES, Wu J, Zhang B, Samii B, Blackford K, Winn DT, Shreder KR, Burbaum JJ, Patricelli MP., Proc. Natl. Acad. Sci. U.S.A. 102(14), 2005
PMID: 15795380

AUTHOR UNKNOWN, 0
Solid phase synthesis of peptide vinyl sulfone and peptide epoxyketone proteasome inhibitors
Overkleeft, Tetrahedron Lett. 41(), 2000
Chemistry in living systems.
Prescher JA, Bertozzi CR., Nat. Chem. Biol. 1(1), 2005
PMID: 16407987
Large-scale proteomic analysis of the human spliceosome.
Rappsilber J, Ryder U, Lamond AI, Mann M., Genome Res. 12(8), 2002
PMID: 12176931
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents.
Ross PL, Huang YN, Marchese JN, Williamson B, Parker K, Hattan S, Khainovski N, Pillai S, Dey S, Daniels S, Purkayastha S, Juhasz P, Martin S, Bartlet-Jones M, He F, Jacobson A, Pappin DJ., Mol. Cell Proteomics 3(12), 2004
PMID: 15385600
A stepwise huisgen cycloaddition process: copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes.
Rostovtsev VV, Green LG, Fokin VV, Sharpless KB., Angew. Chem. Int. Ed. Engl. 41(14), 2002
PMID: 12203546
Activity-based probes for the proteomic profiling of metalloproteases.
Saghatelian A, Jessani N, Joseph A, Humphrey M, Cravatt BF., Proc. Natl. Acad. Sci. U.S.A. 101(27), 2004
PMID: 15220480
Membrane proteins and proteomics: un amour impossible?
Santoni V, Molloy M, Rabilloud T., Electrophoresis 21(6), 2000
PMID: 10786880
Substrate/propeptide-derived endo-epoxysuccinyl peptides as highly potent and selective cathepsin B inhibitors.
Schaschke N, Assfalg-Machleidt I, Machleidt W, Moroder L., FEBS Lett. 421(1), 1998
PMID: 9462845
Epoxysuccinyl peptide-derived affinity labels for cathepsin B.
Schaschke N, Assfalg-Machleidt I, Lassleben T, Sommerhoff CP, Moroder L, Machleidt W., FEBS Lett. 482(1-2), 2000
PMID: 11018529
A novel strategy for quantitative proteomics using isotope-coded protein labels.
Schmidt A, Kellermann J, Lottspeich F., Proteomics 5(1), 2005
PMID: 15602776
Microarray platform for profiling enzyme activities in complex proteomes.
Sieber SA, Mondala TS, Head SR, Cravatt BF., J. Am. Chem. Soc. 126(48), 2004
PMID: 15571375
Chemical strategies for activity-based proteomics.
Speers AE, Cravatt BF., Chembiochem 5(1), 2004
PMID: 14695510
Profiling enzyme activities in vivo using click chemistry methods.
Speers AE, Cravatt BF., Chem. Biol. 11(4), 2004
PMID: 15123248
Inactivation of interleukin-1 beta converting enzyme by peptide (acyloxy)methyl ketones.
Thornberry NA, Peterson EP, Zhao JJ, Howard AD, Griffin PR, Chapman KT., Biochemistry 33(13), 1994
PMID: 8142397
Design and synthesis of activity probes for glycosidases.
Tsai CS, Li YK, Lo LC., Org. Lett. 4(21), 2002
PMID: 12375899
Difference gel electrophoresis: a single gel method for detecting changes in protein extracts.
Unlu M, Morgan ME, Minden JS., Electrophoresis 18(11), 1997
PMID: 9420172
Dissecting protein function using chemical proteomic methods
Verhelst, QSAR Comb. Sci. 24(), 2005
Bioconjugation by copper(I)-catalyzed azide-alkyne [3 + 2] cycloaddition.
Wang Q, Chan TR, Hilgraf R, Fokin VV, Sharpless KB, Finn MG., J. Am. Chem. Soc. 125(11), 2003
PMID: 12630856
Large-scale analysis of the yeast proteome by multidimensional protein identification technology.
Washburn MP, Wolters D, Yates JR 3rd., Nat. Biotechnol. 19(3), 2001
PMID: 11231557
Progress with gene-product mapping of the Mollicutes: Mycoplasma genitalium.
Wasinger VC, Cordwell SJ, Cerpa-Poljak A, Yan JX, Gooley AA, Wilkins MR, Duncan MW, Harris R, Williams KL, Humphery-Smith I., Electrophoresis 16(7), 1995
PMID: 7498152
Profiling protein function with small molecule microarrays.
Winssinger N, Ficarro S, Schultz PG, Harris JL., Proc. Natl. Acad. Sci. U.S.A. 99(17), 2002
PMID: 12167675
Chemical proteomic analysis reveals alternative modes of action for pyrido[2,3-d]pyrimidine kinase inhibitors.
Wissing J, Godl K, Brehmer D, Blencke S, Weber M, Habenberger P, Stein-Gerlach M, Missio A, Cotten M, Muller S, Daub H., Mol. Cell Proteomics 3(12), 2004
PMID: 15475568
Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry.
Zhou H, Ranish JA, Watts JD, Aebersold R., Nat. Biotechnol. 20(5), 2002
PMID: 11981568
Activity-based fluorescent probes that target phosphatases
Zhu, Tetrahedron Lett. 44(), 2003
Developing novel activity-based fluorescent probes that target different classes of proteases.
Zhu Q, Girish A, Chattopadhaya S, Yao SQ., Chem. Commun. (Camb.) (13), 2004
PMID: 15216356

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