Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome

Unell M, Abraham PE, Shah M, Zhang B, Rückert C, VerBerkmoes NC, Jansson JK (2009)
JOURNAL OF PROTEOME RESEARCH 8(4): 1953-1964.

Journal Article | Published | English

No fulltext has been uploaded

Author
; ; ; ; ; ;
Abstract
We compared the Arthrobacter chlorophenolicus proteome during growth on 4-chlorophenol, 4-nitrophenol, or phenol at 5 and 28 degrees C, both for the wild-type and a mutant strain with mass spectrometry based proteomics. A label-free workflow employing spectral counting identified 3749 proteins across all growth conditions, representing over 70% of the predicted genome and 739 of these proteins form the core proteome. Statistically significant differences were found in the proteomes of cells grown under different conditions including differentiation of hundreds of unknown proteins. The 4-chlorophenol-degradation pathway was confirmed, but not that for phenol.
Publishing Year
ISSN
eISSN
PUB-ID

Cite this

Unell M, Abraham PE, Shah M, et al. Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome. JOURNAL OF PROTEOME RESEARCH. 2009;8(4):1953-1964.
Unell, M., Abraham, P. E., Shah, M., Zhang, B., Rückert, C., VerBerkmoes, N. C., & Jansson, J. K. (2009). Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome. JOURNAL OF PROTEOME RESEARCH, 8(4), 1953-1964.
Unell, M., Abraham, P. E., Shah, M., Zhang, B., Rückert, C., VerBerkmoes, N. C., and Jansson, J. K. (2009). Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome. JOURNAL OF PROTEOME RESEARCH 8, 1953-1964.
Unell, M., et al., 2009. Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome. JOURNAL OF PROTEOME RESEARCH, 8(4), p 1953-1964.
M. Unell, et al., “Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome”, JOURNAL OF PROTEOME RESEARCH, vol. 8, 2009, pp. 1953-1964.
Unell, M., Abraham, P.E., Shah, M., Zhang, B., Rückert, C., VerBerkmoes, N.C., Jansson, J.K.: Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome. JOURNAL OF PROTEOME RESEARCH. 8, 1953-1964 (2009).
Unell, Maria, Abraham, Paul E., Shah, Manesh, Zhang, Bing, Rückert, Christian, VerBerkmoes, Nathan C., and Jansson, Janet K. “Impact of Phenolic Substrate and Growth Temperature on the Arthrobacter chlorophenolicus Proteome”. JOURNAL OF PROTEOME RESEARCH 8.4 (2009): 1953-1964.
This data publication is cited in the following publications:
This publication cites the following data publications:

7 Citations in Europe PMC

Data provided by Europe PubMed Central.

Genomic and phenotypic insights into the ecology of Arthrobacter from Antarctic soils.
Dsouza M, Taylor MW, Turner SJ, Aislabie J., BMC Genomics 16(), 2015
PMID: 25649291
Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds.
Scheublin TR, Deusch S, Moreno-Forero SK, Muller JA, van der Meer JR, Leveau JH., Environ. Microbiol. 16(7), 2014
PMID: 24373130
Branching of the p-nitrophenol (PNP) degradation pathway in burkholderia sp. Strain SJ98: Evidences from genetic characterization of PNP gene cluster.
Vikram S, Pandey J, Bhalla N, Pandey G, Ghosh A, Khan F, Jain RK, Raghava GP., AMB Express 2(1), 2012
PMID: 22681853
IMG: the Integrated Microbial Genomes database and comparative analysis system.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Jacob B, Huang J, Williams P, Huntemann M, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC., Nucleic Acids Res. 40(Database issue), 2012
PMID: 22194640
The integrated microbial genomes system: an expanding comparative analysis resource.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Anderson I, Lykidis A, Mavromatis K, Ivanova NN, Kyrpides NC., Nucleic Acids Res. 38(Database issue), 2010
PMID: 19864254
Analysis of two gene clusters involved in the degradation of 4-fluorophenol by Arthrobacter sp. strain IF1.
Ferreira MI, Iida T, Hasan SA, Nakamura K, Fraaije MW, Janssen DB, Kudo T., Appl. Environ. Microbiol. 75(24), 2009
PMID: 19837837

Export

0 Marked Publications

Open Data PUB

Web of Science

View record in Web of Science®

Sources

PMID: 19714879
PubMed | Europe PMC

Search this title in

Google Scholar