Genomics insights into symbiotic nitrogen fixation

Weidner S, Pühler A, Küster H (2003)

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
Abstract / Bemerkung
Following an interaction with rhizobial soil bacteria, legume plants are able to form a novel organ, termed the root nodule. This organ houses the rhizobial microsymbionts, which perform the biological nitrogen fixation process resulting in the incorporation of ammonia into plant organic molecules. Recent advances in genomics have opened exciting new perspectives in this field by providing the complete gene inventory of two rhizobial microsymbionts. The complete genome sequences of Mesorhizobium loti, the symbiont of several Lotus species, and Sinorhizobium meliloti, the symbiont of alfalfa, were determined and annotated in detail. For legume macrosymbionts, expressed sequence tag projects and expression analyses using DNA arrays in conjunction with proteomics approaches have identified numerous genes involved in root nodule formation and nitrogen fixation. The isolation of legume genes by tagging or positional cloning recently allowed the identification of genes that control the very early steps of root nodule organogenesis.


Weidner S, Pühler A, Küster H. Genomics insights into symbiotic nitrogen fixation. CURRENT OPINION IN BIOTECHNOLOGY. 2003;14(2):200-205.
Weidner, S., Pühler, A., & Küster, H. (2003). Genomics insights into symbiotic nitrogen fixation. CURRENT OPINION IN BIOTECHNOLOGY, 14(2), 200-205. doi:10.1016/S0958-1669(03)00022-3
Weidner, S., Pühler, A., and Küster, H. (2003). Genomics insights into symbiotic nitrogen fixation. CURRENT OPINION IN BIOTECHNOLOGY 14, 200-205.
Weidner, S., Pühler, A., & Küster, H., 2003. Genomics insights into symbiotic nitrogen fixation. CURRENT OPINION IN BIOTECHNOLOGY, 14(2), p 200-205.
S. Weidner, A. Pühler, and H. Küster, “Genomics insights into symbiotic nitrogen fixation”, CURRENT OPINION IN BIOTECHNOLOGY, vol. 14, 2003, pp. 200-205.
Weidner, S., Pühler, A., Küster, H.: Genomics insights into symbiotic nitrogen fixation. CURRENT OPINION IN BIOTECHNOLOGY. 14, 200-205 (2003).
Weidner, Stefan, Pühler, Alfred, and Küster, Helge. “Genomics insights into symbiotic nitrogen fixation”. CURRENT OPINION IN BIOTECHNOLOGY 14.2 (2003): 200-205.

19 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

From the Lab to the Farm: An Industrial Perspective of Plant Beneficial Microorganisms.
Parnell JJ, Berka R, Young HA, Sturino JM, Kang Y, Barnhart DM, DiLeo MV., Front Plant Sci 7(), 2016
PMID: 27540383
Protein-based stable isotope probing (protein-SIP) in functional metaproteomics.
Seifert J, Taubert M, Jehmlich N, Schmidt F, Völker U, Vogt C, Richnow HH, von Bergen M., Mass Spectrom Rev 31(6), 2012
PMID: 22422553
Phylogenomics of Reichenowia parasitica, an alphaproteobacterial endosymbiont of the freshwater leech Placobdella parasitica.
Kvist S, Narechania A, Oceguera-Figueroa A, Fuks B, Siddall ME., PLoS One 6(11), 2011
PMID: 22132238
A shotgun lipidomics approach in Sinorhizobium meliloti as a tool in functional genomics.
Basconcillo LS, Zaheer R, Finan TM, McCarry BE., J Lipid Res 50(6), 2009
PMID: 19096048
Cyclopropane fatty acyl synthase in Sinorhizobium meliloti.
Saborido Basconcillo L, Zaheer R, Finan TM, McCarry BE., Microbiology 155(pt 2), 2009
PMID: 19202086
A shotgun lipidomics study of a putative lysophosphatidic acid acyl transferase (PlsC) in Sinorhizobium meliloti.
Basconcillo LS, Zaheer R, Finan TM, McCarry BE., J Chromatogr B Analyt Technol Biomed Life Sci 877(26), 2009
PMID: 19525157
N-hexanoyl-L-homoserine lactone, a mediator of bacterial quorum-sensing regulation, exhibits plant-dependent stability and may be inactivated by germinating Lotus corniculatus seedlings.
Delalande L, Faure D, Raffoux A, Uroz S, D'Angelo-Picard C, Elasri M, Carlier A, Berruyer R, Petit A, Williams P, Dessaux Y., FEMS Microbiol Ecol 52(1), 2005
PMID: 16329888
Medicago-Sinorhizobium symbiotic specificity evolution and the geographic expansion of Medicago.
Béna G, Lyet A, Huguet T, Olivieri I., J Evol Biol 18(6), 2005
PMID: 16313467
Construction and validation of cDNA-based Mt6k-RIT macro- and microarrays to explore root endosymbioses in the model legume Medicago truncatula.
Küster H, Hohnjec N, Krajinski F, El YF, Manthey K, Gouzy J, Dondrup M, Meyer F, Kalinowski J, Brechenmacher L, van Tuinen D, Gianinazzi-Pearson V, Pühler A, Gamas P, Becker A., J Biotechnol 108(2), 2004
PMID: 15129719
What can bacterial genome research teach us about bacteria-plant interactions?
Pühler A, Arlat M, Becker A, Göttfert M, Morrissey JP, O'Gara F., Curr Opin Plant Biol 7(2), 2004
PMID: 15003213
Novel types of two-domain multi-copper oxidases: possible missing links in the evolution.
Nakamura K, Kawabata T, Yura K, Go N., FEBS Lett 553(3), 2003
PMID: 14572631
EMMA: a platform for consistent storage and efficient analysis of microarray data.
Dondrup M, Goesmann A, Bartels D, Kalinowski J, Krause L, Linke B, Rupp O, Sczyrba A, Pühler A, Meyer F., J Biotechnol 106(2-3), 2003
PMID: 14651856

42 References

Daten bereitgestellt von Europe PubMed Central.

A plant receptor-like kinase required for both bacterial and fungal symbiosis.
Stracke S, Kistner C, Yoshida S, Mulder L, Sato S, Kaneko T, Tabata S, Sandal N, Stougaard J, Szczyglowski K, Parniske M., Nature 417(6892), 2002
PMID: 12087405
A receptor kinase gene regulating symbiotic nodule development.
Endre G, Kereszt A, Kevei Z, Mihacea S, Kalo P, Kiss GB., Nature 417(6892), 2002
PMID: 12087406

Viprey, Genome Biology 1(6), 2000
Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula.
Fedorova M, van de Mortel J, Matsumoto PA, Cho J, Town CD, VandenBosch KA, Gantt JS, Vance CP., Plant Physiol. 130(2), 2002
PMID: 12376622
High-resolution transcriptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234.
Perret X, Freiberg C, Rosenthal A, Broughton WJ, Fellay R., Mol. Microbiol. 32(2), 1999
PMID: 10231496
Molecular basis of symbiosis between Rhizobium and legumes.
Freiberg C, Fellay R, Bairoch A, Broughton WJ, Rosenthal A, Perret X., Nature 387(6631), 1997
PMID: 9163424
dbEST--database for "expressed sequence tags".
Boguski MS, Lowe TM, Tolstoshev CM., Nat. Genet. 4(4), 1993
PMID: 8401577
Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics
Handberg, The Plant Journal 2(4), 1992
Construction of a genetic linkage map of the model legume Lotus japonicus using an intraspecific F2 population.
Hayashi M, Miyahara A, Sato S, Kato T, Yoshikawa M, Taketa M, Hayashi M, Pedrosa A, Onda R, Imaizumi-Anraku H, Bachmair A, Sandal N, Stougaard J, Murooka Y, Tabata S, Kawasaki S, Kawaguchi M, Harada K., DNA Res. 8(6), 2001
PMID: 11853317
Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.
Kaneko T, Nakamura Y, Sato S, Asamizu E, Kato T, Sasamoto S, Watanabe A, Idesawa K, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Mochizuki Y, Nakayama S, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S., DNA Res. 7(6), 2000
PMID: 11214968
The composite genome of the legume symbiont Sinorhizobium meliloti.
Galibert F, Finan TM, Long SR, Puhler A, Abola P, Ampe F, Barloy-Hubler F, Barnett MJ, Becker A, Boistard P, Bothe G, Boutry M, Bowser L, Buhrmester J, Cadieu E, Capela D, Chain P, Cowie A, Davis RW, Dreano S, Federspiel NA, Fisher RF, Gloux S, Godrie T, Goffeau A, Golding B, Gouzy J, Gurjal M, Hernandez-Lucas I, Hong A, Huizar L, Hyman RW, Jones T, Kahn D, Kahn ML, Kalman S, Keating DH, Kiss E, Komp C, Lelaure V, Masuy D, Palm C, Peck MC, Pohl TM, Portetelle D, Purnelle B, Ramsperger U, Surzycki R, Thebault P, Vandenbol M, Vorholter FJ, Weidner S, Wells DH, Wong K, Yeh KC, Batut J., Science 293(5530), 2001
PMID: 11474104
Analysis of Medicago truncatula nodule expressed sequence tags.
Gyorgyey J, Vaubert D, Jimenez-Zurdo JI, Charon C, Troussard L, Kondorosi A, Kondorosi E., Mol. Plant Microbe Interact. 13(1), 2000
PMID: 10656586
Proteome analysis of differentially displayed proteins as a tool for the investigation of symbiosis.
Natera SH, Guerreiro N, Djordjevic MA., Mol. Plant Microbe Interact. 13(9), 2000
PMID: 10975656
Novel aspects of symbiotic nitrogen fixation uncovered by transcript profiling with cDNA arrays.
Colebatch G, Kloska S, Trevaskis B, Freund S, Altmann T, Udvardi MK., Mol. Plant Microbe Interact. 15(5), 2002
PMID: 12036271


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