Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses

Manthey K, Krajinski F, Hohnjec N, Firnhaber C, Pühler A, Perlick AM, Küster H (2004)
Mol Plant-Microbe Interact 17(10): 1063-1077.

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Abstract / Bemerkung
Transcriptome profiling based on cDNA array hybridizations and in silico screening was used to identify Medicago truncatula genes induced in both root nodules and arbuscular mycorrhiza (AM). By array hybridizations, we detected several hundred genes that were upregulated in the root nodule and the AM symbiosis, respectively, with a total of 75 genes being induced during both interactions. The second approach based on in silico data mining yielded several hundred additional candidate genes with a predicted symbiosis-enhanced expression. A subset of the genes identified by either expression profiling tool was subjected to quantitative real-time reverse-transcription polymerase chain reaction for a verification of their symbiosis-induced expression. That way, induction in root nodules and AM was confirmed for 26 genes, most of them being reported as symbiosis-induced for the first time. In addition to delivering a number of novel symbiosis-induced genes, our approach identified several genes that were induced in only one of the two root endosymbioses. The spatial expression patterns of two symbiosis-induced genes encoding an annexin and a beta-tubulin were characterized in transgenic roots using promoter-reporter gene fusions.
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Zeitschriftentitel
Mol Plant-Microbe Interact
Band
17
Zeitschriftennummer
10
Seite
1063-1077
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Manthey K, Krajinski F, Hohnjec N, et al. Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant-Microbe Interact. 2004;17(10):1063-1077.
Manthey, K., Krajinski, F., Hohnjec, N., Firnhaber, C., Pühler, A., Perlick, A. M., & Küster, H. (2004). Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant-Microbe Interact, 17(10), 1063-1077. doi:10.1094/MPMI.2004.17.10.1063
Manthey, K., Krajinski, F., Hohnjec, N., Firnhaber, C., Pühler, A., Perlick, A. M., and Küster, H. (2004). Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant-Microbe Interact 17, 1063-1077.
Manthey, K., et al., 2004. Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant-Microbe Interact, 17(10), p 1063-1077.
K. Manthey, et al., “Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses”, Mol Plant-Microbe Interact, vol. 17, 2004, pp. 1063-1077.
Manthey, K., Krajinski, F., Hohnjec, N., Firnhaber, C., Pühler, A., Perlick, A.M., Küster, H.: Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant-Microbe Interact. 17, 1063-1077 (2004).
Manthey, Katja, Krajinski, F, Hohnjec, N, Firnhaber, C, Pühler, Alfred, Perlick, AM, and Küster, Helge. “Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses”. Mol Plant-Microbe Interact 17.10 (2004): 1063-1077.

52 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Nod factor signaling genes and their function in the early stages of Rhizobium infection.
Geurts R, Fedorova E, Bisseling T., Curr Opin Plant Biol 8(4), 2005
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Combined transcriptome profiling reveals a novel family of arbuscular mycorrhizal-specific Medicago truncatula lectin genes.
Frenzel A, Manthey K, Perlick AM, Meyer F, Pühler A, Küster H, Krajinski F., Mol Plant Microbe Interact 18(8), 2005
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