Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress
Stork T, Michel KP, Pistorius EK, Dietz K-J (2005)
JOURNAL OF EXPERIMENTAL BOTANY 56(422): 3193-3206.
Download
No fulltext has been uploaded. References only!
Journal Article
| Original Article
| Published
| English
No fulltext has been uploaded
Author
Department
Abstract
The genomes of the cyanobacteria Synechocystis sp. PCC 6803 and Synechococcus elongatus PCC 7942 encode five and six open reading frames (ORFs), respectively, with similarity to peroxide-detoxifying peroxiredoxins (Prx). In addition to one highly conserved gene each for 2-Cys Prx and 1-Cys Prx, the Synechocystis sp. PCC 6803 genome contains one TypeII Prx and two PrxQ-like ORFs, while Synechococcus elongatus PCC 7942 has four PrxQ-like ORFs. The transcript regulation of all these bioinformatically identified genes was analysed under selected stress conditions, i.e. light limitation and light stress, hydrogen peroxide, methylviologen, salinity, as well as nitrogen- and iron-deficiency. The results on specific time- and stress-dependent regulation of transcript amounts suggest conserved as well as variable functions of these putative Prx-s in antioxidant defence. The results are discussed in the context of evolution and physiological function, particularly in relation to photosynthesis.
Keywords
Publishing Year
ISSN
eISSN
PUB-ID
Cite this
Stork T, Michel KP, Pistorius EK, Dietz K-J. Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. JOURNAL OF EXPERIMENTAL BOTANY. 2005;56(422):3193-3206.
Stork, T., Michel, K. P., Pistorius, E. K., & Dietz, K. - J. (2005). Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. JOURNAL OF EXPERIMENTAL BOTANY, 56(422), 3193-3206. doi:10.1093/jxb/eri316
Stork, T., Michel, K. P., Pistorius, E. K., and Dietz, K. - J. (2005). Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. JOURNAL OF EXPERIMENTAL BOTANY 56, 3193-3206.
Stork, T., et al., 2005. Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. JOURNAL OF EXPERIMENTAL BOTANY, 56(422), p 3193-3206.
T. Stork, et al., “Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress”, JOURNAL OF EXPERIMENTAL BOTANY, vol. 56, 2005, pp. 3193-3206.
Stork, T., Michel, K.P., Pistorius, E.K., Dietz, K.-J.: Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. JOURNAL OF EXPERIMENTAL BOTANY. 56, 3193-3206 (2005).
Stork, T, Michel, KP, Pistorius, EK, and Dietz, Karl-Josef. “Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress”. JOURNAL OF EXPERIMENTAL BOTANY 56.422 (2005): 3193-3206.
This data publication is cited in the following publications:
This publication cites the following data publications:
39 Citations in Europe PMC
Data provided by Europe PubMed Central.
Oxidative stress in cyanobacteria.
Latifi A, Ruiz M, Zhang CC., FEMS Microbiol Rev 33(2), 2009
PMID: 18834454
Latifi A, Ruiz M, Zhang CC., FEMS Microbiol Rev 33(2), 2009
PMID: 18834454
Functional characterisation of the peroxiredoxin gene family members of Synechococcus elongatus PCC 7942.
Stork T, Laxa M, Dietz MS, Dietz KJ., Arch Microbiol 191(2), 2009
PMID: 18974976
Stork T, Laxa M, Dietz MS, Dietz KJ., Arch Microbiol 191(2), 2009
PMID: 18974976
Occurrence, phylogeny, structure, and function of catalases and peroxidases in cyanobacteria.
Bernroitner M, Zamocky M, Furtmüller PG, Peschek GA, Obinger C., J Exp Bot 60(2), 2009
PMID: 19129167
Bernroitner M, Zamocky M, Furtmüller PG, Peschek GA, Obinger C., J Exp Bot 60(2), 2009
PMID: 19129167
Cell membrane diversity in noncovalent protein transduction.
Liu BR, Chou JC, Lee HJ., J Membr Biol 222(1), 2008
PMID: 18288433
Liu BR, Chou JC, Lee HJ., J Membr Biol 222(1), 2008
PMID: 18288433
Peroxiredoxins as cellular guardians in Sulfolobus solfataricus: characterization of Bcp1, Bcp3 and Bcp4.
Limauro D, Pedone E, Galdi I, Bartolucci S., FEBS J 275(9), 2008
PMID: 18355320
Limauro D, Pedone E, Galdi I, Bartolucci S., FEBS J 275(9), 2008
PMID: 18355320
The peroxiredoxin and glutathione peroxidase families in Chlamydomonas reinhardtii.
Dayer R, Fischer BB, Eggen RI, Lemaire SD., Genetics 179(1), 2008
PMID: 18493039
Dayer R, Fischer BB, Eggen RI, Lemaire SD., Genetics 179(1), 2008
PMID: 18493039
Hydrogen peroxide-mediated inactivation of two chloroplastic peroxidases, ascorbate peroxidase and 2-cys peroxiredoxin.
Kitajima S., Photochem Photobiol 84(6), 2008
PMID: 19067962
Kitajima S., Photochem Photobiol 84(6), 2008
PMID: 19067962
PrxQ-A, a member of the peroxiredoxin Q family, plays a major role in defense against oxidative stress in the cyanobacterium Anabaena sp. strain PCC7120.
Latifi A, Ruiz M, Jeanjean R, Zhang CC., Free Radic Biol Med 42(3), 2007
PMID: 17210455
Latifi A, Ruiz M, Jeanjean R, Zhang CC., Free Radic Biol Med 42(3), 2007
PMID: 17210455
Reflections on the function of IsiA, a cyanobacterial stress-inducible, Chl-binding protein.
Singh AK, Sherman LA., Photosynth Res 93(1-3), 2007
PMID: 17375369
Singh AK, Sherman LA., Photosynth Res 93(1-3), 2007
PMID: 17375369
Redox regulation of peroxiredoxin and proteinases by ascorbate and thiols during pea root nodule senescence.
Groten K, Dutilleul C, van Heerden PD, Vanacker H, Bernard S, Finkemeier I, Dietz KJ, Foyer CH., FEBS Lett 580(5), 2006
PMID: 16455082
Groten K, Dutilleul C, van Heerden PD, Vanacker H, Bernard S, Finkemeier I, Dietz KJ, Foyer CH., FEBS Lett 580(5), 2006
PMID: 16455082
Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis.
Lamkemeyer P, Laxa M, Collin V, Li W, Finkemeier I, Schöttler MA, Holtkamp V, Tognetti VB, Issakidis-Bourguet E, Kandlbinder A, Weis E, Miginiac-Maslow M, Dietz KJ., Plant J 45(6), 2006
PMID: 16507087
Lamkemeyer P, Laxa M, Collin V, Li W, Finkemeier I, Schöttler MA, Holtkamp V, Tognetti VB, Issakidis-Bourguet E, Kandlbinder A, Weis E, Miginiac-Maslow M, Dietz KJ., Plant J 45(6), 2006
PMID: 16507087
Inactivation of the extrinsic subunit of photosystem II, PsbU, in Synechococcus PCC 7942 results in elevated resistance to oxidative stress.
Balint I, Bhattacharya J, Perelman A, Schatz D, Moskovitz Y, Keren N, Schwarz R., FEBS Lett 580(8), 2006
PMID: 16554052
Balint I, Bhattacharya J, Perelman A, Schatz D, Moskovitz Y, Keren N, Schwarz R., FEBS Lett 580(8), 2006
PMID: 16554052
Concepts and approaches towards understanding the cellular redox proteome.
Ströher E, Dietz KJ., Plant Biol (Stuttg) 8(4), 2006
PMID: 16906481
Ströher E, Dietz KJ., Plant Biol (Stuttg) 8(4), 2006
PMID: 16906481
Evolution of redoxin genes in the green lineage.
Meyer Y, Riondet C, Constans L, Abdelgawwad MR, Reichheld JP, Vignols F., Photosynth Res 89(2-3), 2006
PMID: 17031546
Meyer Y, Riondet C, Constans L, Abdelgawwad MR, Reichheld JP, Vignols F., Photosynth Res 89(2-3), 2006
PMID: 17031546
Export
0 Marked PublicationsWeb of Science
View record in Web of Science®Sources
PMID: 16284092
PubMed | Europe PMC