Developing and analyzing idealized models for molecular recognition

Behringer H, Bogner T, Polotsky A, Degenhard A, Schmid F (2007)
Journal of Biotechnology 129(2): 268-278.

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We study equilibrium aspects of molecular recognition of two biomolecules using idealized model systems and methods from statistical physics. Starting from the basic experimental findings we demonstrate exemplarily how an idealized coarse-grained model for the investigation of molecular recognition of two biomolecules can be developed. In addition we provide details regarding two model systems for the recognition of a flexible and a rigid biomolecule respectively, the latter taking into account conformational changes. We focus particularly on the interplay and influence of the correlations of the residue distributions of the biomolecules on the recognition process. (c) 2007 Elsevier B.V. All rights reserved.
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Behringer H, Bogner T, Polotsky A, Degenhard A, Schmid F. Developing and analyzing idealized models for molecular recognition. Journal of Biotechnology. 2007;129(2):268-278.
Behringer, H., Bogner, T., Polotsky, A., Degenhard, A., & Schmid, F. (2007). Developing and analyzing idealized models for molecular recognition. Journal of Biotechnology, 129(2), 268-278. doi:10.1016/j.jbiotec.2007.01.035
Behringer, H., Bogner, T., Polotsky, A., Degenhard, A., and Schmid, F. (2007). Developing and analyzing idealized models for molecular recognition. Journal of Biotechnology 129, 268-278.
Behringer, H., et al., 2007. Developing and analyzing idealized models for molecular recognition. Journal of Biotechnology, 129(2), p 268-278.
H. Behringer, et al., “Developing and analyzing idealized models for molecular recognition”, Journal of Biotechnology, vol. 129, 2007, pp. 268-278.
Behringer, H., Bogner, T., Polotsky, A., Degenhard, A., Schmid, F.: Developing and analyzing idealized models for molecular recognition. Journal of Biotechnology. 129, 268-278 (2007).
Behringer, Hans, Bogner, Thorsten, Polotsky, Alexey, Degenhard, Andreas, and Schmid, Friederike. “Developing and analyzing idealized models for molecular recognition”. Journal of Biotechnology 129.2 (2007): 268-278.
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3 Citations in Europe PMC

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Dry and wet interfaces: influence of solvent particles on molecular recognition.
Taktikos J, Behringer H., Phys Rev E Stat Nonlin Soft Matter Phys 79(4 Pt 1), 2009
PMID: 19518257
Influence of correlations on molecular recognition.
Behringer H, Schmid F., Phys Rev E Stat Nonlin Soft Matter Phys 78(3 Pt 1), 2008
PMID: 18851061
Coarse-grained lattice model for investigating the role of cooperativity in molecular recognition.
Behringer H, Degenhard A, Schmid F., Phys Rev E Stat Nonlin Soft Matter Phys 76(3 Pt 1), 2007
PMID: 17930278

31 References

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