Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens

Kiilerich B, Stemmer C, Merkle T, Launholt D, Gorr G, Grasser KD (2008)
Gene 407(1-2): 86-97.

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Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Abstract / Bemerkung
High mobility group (HMG) proteins of the HMGB family are chromatin-associated proteins that act as architectural factors in nucleoprotein structures, which regulate DNA-dependent processes including transcription. Members of the HMGB family have been characterised from various mono-and dicot plants, but not from lower plant species. Here, we have identified three candidate HMGB proteins encoded in the genome of the moss Physcomitrella patens. The structurally similar HMGB2 and HMGB3 proteins display the typical overall structure of higher plant HMGB proteins consisting of a central HMG-box DNA-binding domain that is flanked by a basic N-terminal and an acidic C-terminal domain. The HMGB1 protein differs from higher plant HMGB proteins by having a very extensive N-terminal domain and by lacking the acidic C-terminal domain. Like higher plant HMGB proteins, HMGB3 localises to the cell nucleus, but HMGB I is targeted to plastids. Analysis of the HMG-box domains of HMGB1 and HMGB3 by CD revealed that HMGB1box and the HMGB3box have an alpha-helical structure. While the HMGB3box interacts with DNA comparable to typical higher plant counterparts, the HMGB I box has only a low affinity for DNA. Cotransformation assays in Physcomitrella protoplasts demonstrated that expression of HMGB3 resulted in repression of reporter gene expression. In summary, our data show that functional HMGB-type proteins occur in Physcomitrella and most likely in other lower plant species. (c) 2007 Elsevier B.V All rights reserved.
Erscheinungsjahr
Zeitschriftentitel
Gene
Band
407
Zeitschriftennummer
1-2
Seite
86-97
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Kiilerich B, Stemmer C, Merkle T, Launholt D, Gorr G, Grasser KD. Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene. 2008;407(1-2):86-97.
Kiilerich, B., Stemmer, C., Merkle, T., Launholt, D., Gorr, G., & Grasser, K. D. (2008). Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene, 407(1-2), 86-97. doi:10.1016/j.gene.2007.09.025
Kiilerich, B., Stemmer, C., Merkle, T., Launholt, D., Gorr, G., and Grasser, K. D. (2008). Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene 407, 86-97.
Kiilerich, B., et al., 2008. Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene, 407(1-2), p 86-97.
B. Kiilerich, et al., “Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens”, Gene, vol. 407, 2008, pp. 86-97.
Kiilerich, B., Stemmer, C., Merkle, T., Launholt, D., Gorr, G., Grasser, K.D.: Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens. Gene. 407, 86-97 (2008).
Kiilerich, Bruno, Stemmer, Christian, Merkle, Thomas, Launholt, Dorte, Gorr, Gilbert, and Grasser, Klaus D. “Chromosomal high mobility group (HMG) proteins of the HMGB-type occurring in the moss Physcomitrella patens”. Gene 407.1-2 (2008): 86-97.

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The dengue vector Aedes aegypti contains a functional high mobility group box 1 (HMGB1) protein with a unique regulatory C-terminus.
Ribeiro FS, de Abreu da Silva IC, Carneiro VC, Belgrano Fdos S, Mohana-Borges R, de Andrade Rosa I, Benchimol M, Souza NR, Mesquita RD, Sorgine MH, Gazos-Lopes F, Vicentino AR, Wu W, de Moraes Maciel R, da Silva-Neto MA, Fantappié MR., PLoS One 7(7), 2012
PMID: 22802955
Transcript elongation factor TFIIS is involved in arabidopsis seed dormancy.
Grasser M, Kane CM, Merkle T, Melzer M, Emmersen J, Grasser KD., J Mol Biol 386(3), 2009
PMID: 19150360
Physcomitrella HMGA-type proteins display structural differences compared to their higher plant counterparts.
Lyngaard C, Stemmer C, Stensballe A, Graf M, Gorr G, Decker E, Grasser KD., Biochem Biophys Res Commun 374(4), 2008
PMID: 18662672

66 References

Daten bereitgestellt von Europe PubMed Central.

HMGB proteins and gene expression.
Agresti A, Bianchi ME., Curr. Opin. Genet. Dev. 13(2), 2003
PMID: 12672494
HMG proteins: dynamic players in gene regulation and differentiation.
Bianchi ME, Agresti A., Curr. Opin. Genet. Dev. 15(5), 2005
PMID: 16102963
High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells.
Boonyaratanakornkit V, Melvin V, Prendergast P, Altmann M, Ronfani L, Bianchi ME, Taraseviciene L, Nordeen SK, Allegretto EA, Edwards DP., Mol. Cell. Biol. 18(8), 1998
PMID: 9671457
High-mobility-group chromosomal proteins: architectural components that facilitate chromatin function
Bustin, Prog. Nucleic Acids Res. 54(), 1996
HMG boxes of DSP1 protein interact with the rel homology domain of transcription factors.
Decoville M, Giraud-Panis MJ, Mosrin-Huaman C, Leng M, Locker D., Nucleic Acids Res. 28(2), 2000
PMID: 10606643
A close relative of the nuclear, chromosomal high-mobility group protein HMG1 in yeast mitochondria.
Diffley JF, Stillman B., Proc. Natl. Acad. Sci. U.S.A. 88(17), 1991
PMID: 1881919
HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein.
Grasser KD, Grill S, Duroux M, Launholt D, Thomsen MS, Nielsen BV, Nielsen HK, Merkle T., Biochemistry 43(5), 2004
PMID: 14756567
Stimulatory effect of the maize HMGa protein on reporter gene expression in maize protoplasts.
Grasser KD, Hetz W, Griess EA, Feix G., FEBS Lett. 327(2), 1993
PMID: 8335103
Chromatin-associated architectural HMGA and HMGB proteins assist transcription factor function
Grasser, 2006
High mobility group proteins of the plant HMGB family: dynamic chromatin modulators.
Grasser KD, Launholt D, Grasser M., Biochim. Biophys. Acta 1769(5-6), 2007
PMID: 17316841
The Arabidopsis genome encodes structurally and functionally diverse HMGB-type proteins.
Grasser M, Lentz A, Lichota J, Merkle T, Grasser KD., J. Mol. Biol. 358(3), 2006
PMID: 16563436
Optimisation of a bioreactor culture of the moss Physcomitrella patens for mass production of protoplasts
Hohe, Plant Sci. 163(), 2002
High mobility group protein-1 (HMG-1) is a unique activator of p53.
Jayaraman L, Moorthy NC, Murthy KG, Manley JL, Bustin M, Prives C., Genes Dev. 12(4), 1998
PMID: 9472015
The role of intercalating residues in chromosomal high-mobility-group protein DNA binding, bending and specificity.
Klass J, Murphy FV 4th, Fouts S, Serenil M, Changela A, Siple J, Churchill ME., Nucleic Acids Res. 31(11), 2003
PMID: 12771212
Duplicated NHP6 genes of Saccharomyces cerevisiae endode proteins homologous to bovine high-mobility-group protein 1
Kolodrubetz, J. Biol. Chem. 265(), 1990
High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions.
Koroleva OA, Tomlinson ML, Leader D, Shaw P, Doonan JH., Plant J. 41(1), 2005
PMID: 15610358
Overlapping expression patterns among the genes encoding Arabidopsis chromosomal high mobility group (HMG) proteins.
Launholt D, Gronlund JT, Nielsen HK, Grasser KD., FEBS Lett. 581(6), 2007
PMID: 17316617
Multifocal two-photon laser scanning microscopy combined with photo-activatable GFP for in vivo monitoring of intracellular protein dynamics in real time.
Martini J, Schmied K, Palmisano R, Toensing K, Anselmetti D, Merkle T., J. Struct. Biol. 158(3), 2007
PMID: 17363273
The S. cerevisiae architectural HMGB protein NHP6A complexed with DNA: DNA and protein conformational changes upon binding.
Masse JE, Wong B, Yen YM, Allain FH, Johnson RC, Feigon J., J. Mol. Biol. 323(2), 2002
PMID: 12381320
Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins.
Ohndorf UM, Rould MA, He Q, Pabo CO, Lippard SJ., Nature 399(6737), 1999
PMID: 10385126
High mobility group chromosomal proteins bind to AT-rich tracts flanking plant genes.
Pedersen TJ, Arwood LJ, Spiker S, Guiltinan MJ, Thompson WF., Plant Mol. Biol. 16(1), 1991
PMID: 1840685
Histone H1 enhances the DNA binding activity of the transcription factor EmBP-1.
Schultz TF, Spiker S, Quatrano RS., J. Biol. Chem. 271(42), 1996
PMID: 8824200
In vivo glyco-engineered antibody with improved lytic potential produced by an innovative non-mammalian expression system.
Schuster M, Jost W, Mudde GC, Wiederkum S, Schwager C, Janzek E, Altmann F, Stadlmann J, Stemmer C, Gorr G., Biotechnol J 2(6), 2007
PMID: 17427997
High-mobility group chromosomal proteins of wheat.
Spiker S., J. Biol. Chem. 259(19), 1984
PMID: 6480596
Occurrence of five different chromosomal HMG1 proteins in various maize tissues.
Stemmer C, Grimm R, Grasser KD., Plant Mol. Biol. 41(3), 1999
PMID: 10598102
Variability in Arabidopsis thaliana chromosomal high-mobility-group-1-like proteins.
Stemmer C, Ritt C, Igloi GL, Grimm R, Grasser KD., Eur. J. Biochem. 250(3), 1997
PMID: 9461286
HMG1 protein stimulates DNA end joining by promoting association of DNA molecules via their ends.
Stros M, Cherny D, Jovin TM., Eur. J. Biochem. 267(13), 2000
PMID: 10866811

AUTHOR UNKNOWN, 0
HMG1 and 2, and related 'architectural' DNA-binding proteins.
Thomas JO, Travers AA., Trends Biochem. Sci. 26(3), 2001
PMID: 11246022
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG., Nucleic Acids Res. 25(24), 1997
PMID: 9396791
A set of plant expression vectors for transcriptional and translational fusions.
Topfer R, Matzeit V, Gronenborn B, Schell J, Steinbiss HH., Nucleic Acids Res. 15(14), 1987
PMID: 3615207
Recognition of distorted DNA structures by HMG domains.
Travers A., Curr. Opin. Struct. Biol. 10(1), 2000
PMID: 10679469
Kinetic analysis of high-mobility-group proteins HMG-1 and HMG-I/Y binding to cholesterol-tagged DNA on a supported lipid monolayer.
Webster CI, Cooper MA, Packman LC, Williams DH, Gray JC., Nucleic Acids Res. 28(7), 2000
PMID: 10710428
HMG-1 enhances HMG-I/Y binding to an A/T-rich enhancer element from the pea plastocyanin gene.
Webster CI, Packman LC, Gray JC., Eur. J. Biochem. 268(11), 2001
PMID: 11389716
High-level expression of secreted complex glycosylated recombinant human erythropoietin in the Physcomitrella Delta-fuc-t Delta-xyl-t mutant.
Weise A, Altmann F, Rodriguez-Franco M, Sjoberg ER, Baumer W, Launhardt H, Kietzmann M, Gorr G., Plant Biotechnol. J. 5(3), 2007
PMID: 17359496
Cloning and characterization of rice HMGB1 gene.
Wu Q, Zhang W, Pwee KH, Kumar PP., Gene 312(), 2003
PMID: 12909345
Rice HMGB1 protein recognizes DNA structures and bends DNA efficiently.
Wu Q, Zhang W, Pwee KH, Kumar PP., Arch. Biochem. Biophys. 411(1), 2003
PMID: 12590928
HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation.
Zappavigna V, Falciola L, Helmer-Citterich M, Mavilio F, Bianchi ME., EMBO J. 15(18), 1996
PMID: 8890171
Binding to four-way junction DNA: a common property of architectural proteins?
Zlatanova J, van Holde K., FASEB J. 12(6), 1998
PMID: 9535214

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