Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana

Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T (2009)
Nucleic Acids Research 37(12): 4010-4021.

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Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T. Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research. 2009;37(12):4010-4021.
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., & Merkle, T. (2009). Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), 4010-4021. doi:10.1093/nar/gkp272
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., and Merkle, T. (2009). Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research 37, 4010-4021.
Alves jun., L., et al., 2009. Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), p 4010-4021.
L. Alves jun., et al., “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”, Nucleic Acids Research, vol. 37, 2009, pp. 4010-4021.
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., Merkle, T.: Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research. 37, 4010-4021 (2009).
Alves jun., Leonardo, Niemeier, Sandra, Hauenschild, Arne, Rehmsmeier, Marc, and Merkle, Thomas. “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”. Nucleic Acids Research 37.12 (2009): 4010-4021.
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78 References

Data provided by Europe PubMed Central.

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome.
Addo-Quaye C, Eshoo TW, Bartel DP, Axtell MJ., Curr. Biol. 18(10), 2008
PMID: 18472421
A link between RNA metabolism and silencing affecting Arabidopsis development.
Gregory BD, O'Malley RC, Lister R, Urich MA, Tonti-Filippini J, Chen H, Millar AH, Ecker JR., Dev. Cell 14(6), 2008
PMID: 18486559

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