Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana

Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T (2009)
Nucleic Acids Research 37(12): 4010-4021.

Download
OA
Journal Article | Published | English
Publishing Year
ISSN
eISSN
PUB-ID

Cite this

Alves jun. L, Niemeier S, Hauenschild A, Rehmsmeier M, Merkle T. Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research. 2009;37(12):4010-4021.
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., & Merkle, T. (2009). Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), 4010-4021.
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., and Merkle, T. (2009). Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research 37, 4010-4021.
Alves jun., L., et al., 2009. Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), p 4010-4021.
L. Alves jun., et al., “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”, Nucleic Acids Research, vol. 37, 2009, pp. 4010-4021.
Alves jun., L., Niemeier, S., Hauenschild, A., Rehmsmeier, M., Merkle, T.: Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research. 37, 4010-4021 (2009).
Alves jun., Leonardo, Niemeier, Sandra, Hauenschild, Arne, Rehmsmeier, Marc, and Merkle, Thomas. “Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana”. Nucleic Acids Research 37.12 (2009): 4010-4021.
Main File(s)
File Name
Access Level
OA Open Access

This data publication is cited in the following publications:
This publication cites the following data publications:

47 Citations in Europe PMC

Data provided by Europe PubMed Central.

Virus versus host plant microRNAs: who determines the outcome of the interaction?
Maghuly F, Ramkat RC, Laimer M., PLoS ONE 9(6), 2014
PMID: 24896088
Identification and characterization of a subset of microRNAs in wheat (Triticum aestivum L.).
Su C, Yang X, Gao S, Tang Y, Zhao C, Li L., Genomics 103(4), 2014
PMID: 24667243
Family-wide survey of miR169s and NF-YAs and their expression profiles response to abiotic stress in maize roots.
Luan M, Xu M, Lu Y, Zhang Q, Zhang L, Zhang C, Fan Y, Lang Z, Wang L., PLoS ONE 9(3), 2014
PMID: 24633051
Prediction of microRNA-regulated protein interaction pathways in Arabidopsis using machine learning algorithms.
Kurubanjerdjit N, Huang CH, Lee YL, Tsai JJ, Ng KL., Comput. Biol. Med. 43(11), 2013
PMID: 24209909
MicroRNA or NMD: why have two RNA silencing systems?
Zhang Z, Hu L, Kong X., J Genet Genomics 40(10), 2013
PMID: 24156916
MicroRNAs and their putative targets in Brassica napus seed maturation.
Huang D, Koh C, Feurtado JA, Tsang EW, Cutler AJ., BMC Genomics 14(), 2013
PMID: 23448243
A reversed framework for the identification of microRNA-target pairs in plants.
Shao C, Chen M, Meng Y., Brief. Bioinformatics 14(3), 2013
PMID: 22811545
Genome-wide search for miRNA-target interactions in Arabidopsis thaliana with an integrated approach.
Ding J, Li D, Ohler U, Guan J, Zhou S., BMC Genomics 13 Suppl 3(), 2012
PMID: 22759612
In-silico and in-vivo analyses of EST databases unveil conserved miRNAs from Carthamus tinctorius and Cynara cardunculus.
Catalano D, Pignone D, Sonnante G, Finetti-Sialer MM., BMC Bioinformatics 13 Suppl 4(), 2012
PMID: 22536958
Deep sequencing of small RNAs in plants: applied bioinformatics.
Studholme DJ., Brief Funct Genomics 11(1), 2012
PMID: 22184332
Comparative analysis of miRNAs and their targets across four plant species.
Lenz D, May P, Walther D., BMC Res Notes 4(), 2011
PMID: 22067256
miSolRNA: A tomato micro RNA relational database.
Bazzini AA, Asis R, Gonzalez V, Bassi S, Conte M, Soria M, Fernie AR, Asurmendi S, Carrari F., BMC Plant Biol. 10(), 2010
PMID: 21059227
Systematic analysis of regulation and functions of co-expressed microRNAs in humans.
Liao M, Jiang W, Chen X, Lian B, Li W, Lv Y, Wang Y, Wang S, Li X., Mol Biosyst 6(10), 2010
PMID: 20548996
Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.
Richardson CR, Luo QJ, Gontcharova V, Jiang YW, Samanta M, Youn E, Rock CD., PLoS ONE 5(5), 2010
PMID: 20520764
Cleavage of a non-conserved target by a specific miR156 isoform in root apexes of Medicago truncatula.
Naya L, Khan GA, Sorin C, Hartmann C, Crespi M, Lelandais-Briere C., Plant Signal Behav 5(3), 2010
PMID: 20200496

78 References

Data provided by Europe PubMed Central.

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome.
Addo-Quaye C, Eshoo TW, Bartel DP, Axtell MJ., Curr. Biol. 18(10), 2008
PMID: 18472421
A link between RNA metabolism and silencing affecting Arabidopsis development.
Gregory BD, O'Malley RC, Lister R, Urich MA, Tonti-Filippini J, Chen H, Millar AH, Ecker JR., Dev. Cell 14(6), 2008
PMID: 18486559

Export

0 Marked Publications

Open Data PUB

Web of Science

View record in Web of Science®

Sources

PMID: 19417064
PubMed | Europe PMC

Search this title in

Google Scholar