Karina Brinkrolf
PEVZ-ID
30 Publikationen
-
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2728042Merten, Madlen, Brinkrolf, Karina, Albersmeier, Andreas, Kutter, Yvonne, Rückert, Christian, and Tauch, Andreas. “Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen”. Genome Announcements 3.2 (2015): e00183-15.PUB | DOI | WoS | PubMed | Europe PMC
-
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605Rupp, Oliver, Brinkrolf, Karina, Buerth, Christoph, Kunigo, Maya, Schneider, Jessica, Jaenicke, Sebastian, Goesmann, Alexander, Pühler, Alfred, Jaeger, Karl-Erich, and Ernst, Joachim F. “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”. Journal of Biotechnology 211 (2015): 20-30.PUB | DOI | WoS | PubMed | Europe PMC
-
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2718773Wippermann, Anna, Rupp, Oliver, Brinkrolf, Karina, Hoffrogge, Raimund, and Noll, Thomas. “The DNA methylation landscape of Chinese hamster ovary (CHO) DP-12 cells”. Journal of Biotechnology 199 (2015): 38-46.PUB | DOI | WoS | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705365Tippelt, Anna, Albersmeier, Andreas, Brinkrolf, Karina, Rückert, Christian, Fernández-Natal, Isabel, Soriano, Francisco, and Tauch, Andreas. “Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient”. Genome announcements 2.6 (2014).PUB | DOI | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662834Glaub, Alina, Bomholt, Christina, Gravermann, Kerstin, Brinkrolf, Karina, Albersmeier, Andreas, Rückert, Christian, and Tauch, Andreas. “Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species”. Genome announcements 2.2 (2014).PUB | DOI | PubMed | Europe PMC
-
2014 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2694187Brinkrolf, Karina, Hoffrogge, Raimund, Hackl, Matthias, Tauch, Andreas, Baumann, Martina, Noll, Thomas, Goesmann, Alexander, Pühler, Alfred, and Borth, Nicole. “Functional -Omics for Cell Lines and Processes - The -Omics Technologies on the Example of CHO Cells”. Animal Cell Biotechnology In Biologics Production. Ed. Hansjörg Hauser and Roland Wagner. Berlin, Germany: Walter de Gruyter, 2014. 702.PUB
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988Jakobi, Tobias, Brinkrolf, Karina, Tauch, Andreas, Noll, Thomas, Stoye, Jens, Pühler, Alfred, and Goesmann, Alexander. “Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing”. Journal of Biotechnology 190 (2014): 64-75.PUB | DOI | WoS | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676552Becker, Jennifer, Timmermann, Christina, Rupp, Oliver, Albaum, Stefan, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Tauch, Andreas, and Noll, Thomas. “Transcriptome analyses of CHO cells with the next-generation microarray CHO41K: Development and validation by analysing the influence of the growth stimulating substance IGF-1 substitute LongR(3.)”. Journal of biotechnology 178 (2014): 23-31.PUB | DOI | WoS | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2656773Rupp, Oliver, Becker, Jennifer, Brinkrolf, Karina, Timmermann, Christina, Borth, Nicole, Pühler, Alfred, Noll, Thomas, and Goesmann, Alexander. “Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines”. PLoS ONE 9.1 (2014): e85568.PUB | DOI | WoS | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2629377Bomholt, Christina, Glaub, Alina, Gravermann, Kerstin, Albersmeier, Andreas, Brinkrolf, Karina, Rückert, Christian, and Tauch, Andreas. “Whole-Genome Sequence of the Clinical Strain Corynebacterium argentoratense DSM 44202, Isolated from a Human Throat Specimen”. Genome announcements 1.5 (2013): e00793-13.PUB | DOI | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2615581Brinkrolf, Karina, Rupp, Oliver, Laux, Holger, Kollin, Florian, Ernst, Wolfgang, Linke, Burkhard, Kofler, Rudolf, Romand, Sandrine, Hesse, Friedemann, Budach, Wolfgang E, Galosy, Sybille, Müller, Dethardt, Noll, Thomas, Wienberg, Johannes, Jostock, Thomas, Leonard, Mark, Grillari, Johannes, Tauch, Andreas, Goesmann, Alexander, Helk, Bernhard, Mott, John E, Pühler, Alfred, and Borth, Nicole. “Chinese hamster genome sequenced from sorted chromosomes”. Nature Biotechnology 31.8 (2013): 694-695.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501364Meleady, Paula, Hoffrogge, Raimund, Henry, Michael, Rupp, Oliver, Bort, Juan Hernandez, Clarke, Colin, Brinkrolf, Karina, Kelly, Shane, Müller, Benjamin, Doolan, Padraig, Hackl, Matthias, Beckmann, Tim, Noll, Thomas, Grillari, Johannes, Barron, Niall, Pühler, Alfred, Clynes, Martin, and Borth, Nicole. “Utilization and evaluation of CHO-specific sequence databases for mass spectrometry based proteomics”. Biotechnology and Bioengineering 109.6 (2012): 1386-1394.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002Schneider, Jessica, Rupp, Oliver, Trost, Eva, Jaenicke, Sebastian, Passoth, V., Goesmann, Alexander, Tauch, Andreas, and Brinkrolf, Karina. “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”. FEMS Yeast Research 12.3 (2012): 382-386.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2478526Hackl, Matthias, Jadhav, Vaibhav, Jakobi, Tobias, Rupp, Oliver, Brinkrolf, Karina, Goesmann, Alexander, Pühler, Alfred, Noll, Thomas, Borth, Nicole, and Grillari, Johannes. “Computational identification of microRNA gene loci and precursor microRNA sequences in CHO cell lines”. Journal of Biotechnology 158.3 (2012): 151-155.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530885Brinkrolf, Karina, Schneider, Jessica, Knecht, Marina, Rückert, Christian, and Tauch, Andreas. “Draft Genome Sequence of Turicella otitidis ATCC 51513, Isolated from Middle Ear Fluid from a Child with Otitis Media”. Journal of Bacteriology 194.21 (2012): 5968-5969.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2453768Becker, Jennifer, Timmermann, Christina, Jakobi, Tobias, Rupp, Oliver, Szczepanowski, Rafael, Hackl, Matthias, Goesmann, Alexander, Tauch, Andreas, Borth, Nicole, Grillari, Johannes, Pühler, Alfred, Noll, Thomas, and Brinkrolf, Karina. “Next-generation sequencing of the CHO cell transcriptome”. BMC Proceedings 5.Suppl. 8 (2011): P6.PUB | DOI
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371Küberl, Andreas, Schneider, Jessica, Thallinger, Gerhard G., Anderl, Ingund, Wibberg, Daniel, Hajek, Tanja, Jaenicke, Sebastian, Brinkrolf, Karina, Goesmann, Alexander, Szczepanowski, Rafael, Pühler, Alfred, Schwab, Helmut, Glieder, Anton, and Pichler, Harald. “High-quality genome sequence of Pichia pastoris CBS7435”. Journal of Biotechnology 154.4 (2011): 312-320.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396576Becker, Jennifer, Hackel, M, Jakobi, Tobias, Rupp, Oliver, Schneider, Jessica, Szczepanowski, Rafael, Bekel, Thomas, Borth, N, Goesmann, Alexander, Grillari, J, Kaltschmidt, Christian, Noll, Thomas, Pühler, Alfred, Tauch, Andreas, and Brinkrolf, Karina. “Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing”. Journal of Biotechnology 156.3 (2011): 227-235.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445Schneider, Jessica, Blom, Jochen, Jaenicke, Sebastian, Linke, Burkhard, Brinkrolf, Karina, Neuweger, Heiko, Tauch, Andreas, and Goesmann, Alexander. “RAPYD - Rapid Annotation Platform for Yeast Data”. Journal of Biotechnology 155.1 (2011): 118-126.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955Hackl, Matthias, Jakobi, Tobias, Blom, Jochen, Doppmeier, Daniel, Brinkrolf, Karina, Szczepanowski, Rafael, Bernhart, Stephan H, Höner zu Siederdissen, Christian, Bort, Juan A Hernandez, Wieser, Matthias, Kunert, Renate, Jeffs, Simon, Hofacker, Ivo L., Goesmann, Alexander, Pühler, Alfred, Borth, Nicole, and Grillari, Johannes. “Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering”. Journal of Biotechnology 153.1-2 (2011): 62-75.PUB | DOI | WoS | PubMed | Europe PMC
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635951Nentwich, Svenja S., Brinkrolf, Karina, Gaigalat, Lars, Hueser, Andrea T., Rey, Daniel A., Mohrbach, Tobias, Marin, Kay, Pühler, Alfred, Tauch, Andreas, and Kalinowski, Jörn. “Characterization of the Lacl-type transcriptional repressor RbsR controlling ribose transport in Corynebacterium glutamicum ATCC 13032”. MICROBIOLOGY 155.1 (2009): 150-164.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588078Brinkrolf, Karina, Ploeger, Svenja, Solle, Sandra, Brune, Iris, Nentwich, Svenia S., Hueser, Andrea T., Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The LacI/GalR family transcriptional regulator UriR negatively controls uridine utilization of Corynebacterium glutamicum by binding to catabolite-responsive element (cre)-like sequences”. MICROBIOLOGY 154.4 (2008): 1068-1081.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585918Tauch, Andreas, Trost, Eva, Tilker, Alexandra, Ludewig, Ulrike, Schneiker-Bekel, Susanne, Goesmann, Alexander, Arnold, Walter, Bekel, Thomas, Brinkrolf, Karina, Brune, Iris, Goetker, Susanne, Kalinowski, Jörn, Kamp, Paul-Bertram, Lobo, Francisco Pereira, Viehöver, Prisca, Weisshaar, Bernd, Soriano, Francisco, Droege, Marcus, and Pühler, Alfred. “The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing”. Journal of Biotechnology 136.1-2 (2008): 11-21.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939Tauch, Andreas, Schneider, Jessica, Szczepanowski, Rafael, Tilker, Alexandra, Viehöver, Prisca, Gartemann, Karl-Heinz, Arnold, Walter, Blom, Jochen, Brinkrolf, Karina, Brune, Iris, Goetker, Susanne, Weisshaar, Bernd, Goesmann, Alexander, Droege, Marcus, and Pühler, Alfred. “Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids”. Journal of Biotechnology 136.1-2 (2008): 22-30.PUB | DOI | WoS | PubMed | Europe PMC
-
2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594020Baumbach, Jan, Wittkop, Tobias, Rademacher, Katrin, Rahmann, Sven, Brinkrolf, Karina, and Tauch, Andreas. “CoryneRegNet 3.0 - An interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli”. Journal of Biotechnology. ELSEVIER SCIENCE BV, 2007.Vol. 129. JOURNAL OF BIOTECHNOLOGY. 279-289.PUB | DOI | WoS | PubMed | Europe PMC
-
2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1594000Brinkrolf, Karina, Brune, Iris, and Tauch, Andreas. “The transcriptional regulatory network of the amino acid producer Corynebacterium glutamicum”. Journal of Biotechnology. ELSEVIER SCIENCE BV, 2007.Vol. 129. JOURNAL OF BIOTECHNOLOGY. 191-211.PUB | DOI | WoS | PubMed | Europe PMC
-
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499499Baumbach, Jan, Brinkrolf, Karina, Wittkop, Tobias, Tauch, Andreas, and Rahmann, Sven. “CoryneRegNet 2: An integrative bioinformatics approach for reconstruction and comparison of transcriptional regulatory networks in prokaryotes”. Journal of Integrative Bioinformatics 3.2 (2006): 24.PUB | DOI
-
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773632Baumbach, Jan, Brinkrolf, Karina, Czaja, Lisa F., Rahmann, Sven, and Tauch, Andreas. “CoryneRegNet: An ontology-based data warehouse of corynebacterial transcription factors and regulatory networks”. BMC Genomics 7.1 (2006): 24.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596705Brinkrolf, Karina, Brune, Iris, and Tauch, Andreas. “Transcriptional regulation of catabolic pathways for aromatic compounds in Corynebacterium glutamicum”. GENETICS AND MOLECULAR RESEARCH 5.4 (2006): 773-789.PUB | WoS | PubMed | Europe PMC
-
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773606Brune, Iris, Brinkrolf, Karina, Kalinowski, Jörn, Pühler, Alfred, and Tauch, Andreas. “The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences”. BMC Genomics 6.1 (2005): 86.PUB | PDF | DOI | WoS | PubMed | Europe PMC