62 Publikationen
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2981194The genome of the glasshouse plant noble rhubarb (Rheum nobile) provides a window into alpine adaptationPUB | DOI | WoS | PubMed | Europe PMC | CNGBdb Project
Feng, Tao, The genome of the glasshouse plant noble rhubarb (Rheum nobile) provides a window into alpine adaptation. Communications Biology 6 (1). , 2023 -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2965468The R2R3-MYB gene family in Cicer arietinum: genome-wide identification and expression analysis leads to functional characterization of proanthocyanidin biosynthesis regulators in the seed coatPUB | DOI | WoS | PubMed | Europe PMC
Rajput, Ruchika, The R2R3-MYB gene family in Cicer arietinum: genome-wide identification and expression analysis leads to functional characterization of proanthocyanidin biosynthesis regulators in the seed coat. Planta 256 (4). , 2022 -
2022 | Datenpublikation | PUB-ID: 2963492Supplementary material related to MBS analysis of seed quality parameters in Brassica napusPUB | Dateien verfügbar | DOI
Pucker, Boas, Supplementary material related to MBS analysis of seed quality parameters in Brassica napus. (). , 2022 -
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945592Dysregulation of macrophage PEPD in obesity determines adipose tissue fibro-inflammation and insulin resistancePUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Pellegrinelli, Vanessa, Dysregulation of macrophage PEPD in obesity determines adipose tissue fibro-inflammation and insulin resistance. Nature Metabolism 4 (4). , 2022 -
2021 | Datenpublikation | PUB-ID: 2956654Arabidopsis thaliana methylation pattern analysis based on ONT sequence readsPUB | Dateien verfügbar | DOI
Schilbert, Hanna, Arabidopsis thaliana methylation pattern analysis based on ONT sequence reads. (). , 2021 -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2952434Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesisPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
Pucker, Boas, Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis. BMC Genomics 22 (). , 2021 -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943037Reference-based QUantification Of gene Dispensability (QUOD)PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Sielemann, Katharina, Reference-based QUantification Of gene Dispensability (QUOD). Plant Methods 17 (1). , 2021 -
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2952659The R2R3-MYB transcription factor MtMYB134 orchestrates flavonol biosynthesis in Medicago truncatulaPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Naik, Jogindra, The R2R3-MYB transcription factor MtMYB134 orchestrates flavonol biosynthesis in Medicago truncatula. Plant Molecular Biology 106 (1-2). , 2021 -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955954The report of anthocyanins in the betalain-pigmented genus Hylocereus is not well evidenced and is not a strong basis to refute the mutual exclusion paradigmPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Pucker, Boas, The report of anthocyanins in the betalain-pigmented genus Hylocereus is not well evidenced and is not a strong basis to refute the mutual exclusion paradigm. BMC Plant Biology 21 (1). , 2021 -
2021 | Datenpublikation | PUB-ID: 2956788Pitaya transcriptome assemblies and investigation of transcript abundances IIPUB | Dateien verfügbar | DOI
Pucker, Boas, Pitaya transcriptome assemblies and investigation of transcript abundances II. (). , 2021 -
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955558A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineagePUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Montero, Héctor, A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage. Proceedings of the National Academy of Sciences 118 (25). , 2021 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
Busche, Mareike, Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics 10 (1). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941655A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock ‘Börner’ (Vitis riparia × Vitis cinerea) and Its Exploitation for Marker Development and Targeted MappingPUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
Holtgräwe, Daniela, A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock ‘Börner’ (Vitis riparia × Vitis cinerea) and Its Exploitation for Marker Development and Targeted Mapping. Frontiers in Plant Science 11 (). , 2020 -
2020 | Datenpublikation | PUB-ID: 2942069Gold standard of Nd1 vs TAIR10 sequence variantsPUB | Dateien verfügbar | DOI
Schilbert, Hanna, Gold standard of Nd1 vs TAIR10 sequence variants. (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942341Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS DataPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Schilbert, Hanna, Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data. Plants 9 (4). , 2020 -
2020 | Datenpublikation | PUB-ID: 2946079Reference-based QUantification Of gene Dispensability (QUOD) - test datasetPUB | Dateien verfügbar | DOI
Sielemann, Katharina, Reference-based QUantification Of gene Dispensability (QUOD) - test dataset. (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311Animal, fungi, and plant genome sequences harbour different non-canonical splice sitesPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Frey, Katharina, Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. Cells 9 (2). , 2020 -
2020 | Datenpublikation | PUB-ID: 2946374Pitaya transcriptome assemblies and investigation of transcript abundancesPUB | Dateien verfügbar | DOI
Pucker, Boas, Pitaya transcriptome assemblies and investigation of transcript abundances. (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946440The R2R3-MYB gene family in banana (Musa acuminata): Genome-wide identification, classification and expression patternsPUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
Pucker, Boas, The R2R3-MYB gene family in banana (Musa acuminata): Genome-wide identification, classification and expression patterns. PLoS One 15 (10). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948720RNA-Seq Time Series of Vitis vinifera Bud Development Reveals Correlation of Expression Patterns with the Local Temperature ProfilePUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
Pucker, Boas, RNA-Seq Time Series of Vitis vinifera Bud Development Reveals Correlation of Expression Patterns with the Local Temperature Profile. Plants 9 (11). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946066The reuse of public datasets in the life sciences: potential risks and rewardsPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Sielemann, Katharina, The reuse of public datasets in the life sciences: potential risks and rewards. PeerJ 8 (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941669High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read SequencingPUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
Siadjeu, Christian, High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing. Genes 11 (3). , 2020 -
2020 | Datenpublikation | PUB-ID: 2941469Dioscorea dumetorum genome sequence v1.0PUB | Dateien verfügbar | DOI
Pucker, Boas, Dioscorea dumetorum genome sequence v1.0. (). , 2020 -
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2946565The land plant‐specific MIXTA‐MYB lineage is implicated in the early evolution of the plant cuticle and the colonization of landPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Xu, Bo, The land plant‐specific MIXTA‐MYB lineage is implicated in the early evolution of the plant cuticle and the colonization of land. New Phytologist (). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944597Automatic identification of players in the flavonoid biosynthesis with application on the biomedicinal plant Croton tigliumPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Pucker, Boas, Automatic identification of players in the flavonoid biosynthesis with application on the biomedicinal plant Croton tiglium. Plants 9 (9). , 2020 -
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2943062The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in ricePUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Choi, Jeongmin, The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in rice. Nature Communications 11 (1). , 2020 -
2020 | Datenpublikation | PUB-ID: 2941041Next generation sequencing to investigate genomic diversity in Caryophyllales - Kewa caespitosaPUB | Dateien verfügbar | DOI
Pucker, Boas, Next generation sequencing to investigate genomic diversity in Caryophyllales - Kewa caespitosa. (). , 2020 -
2020 | Datenpublikation | PUB-ID: 2941045Next generation sequencing to investigate genomic diversity in Caryophyllales - Pharnaceum exiguumPUB | Dateien verfügbar | DOI
Pucker, Boas, Next generation sequencing to investigate genomic diversity in Caryophyllales - Pharnaceum exiguum. (). , 2020 -
2020 | Datenpublikation | PUB-ID: 2941043Next generation sequencing to investigate genomic diversity in Caryophyllales - Macarthuria australisPUB | Dateien verfügbar | DOI
Pucker, Boas, Next generation sequencing to investigate genomic diversity in Caryophyllales - Macarthuria australis. (). , 2020 -
2020 | Datenpublikation | PUB-ID: 2941047Arabidopsis thaliana Nd-1 Illumina short readsPUB | Dateien verfügbar | DOI
Pucker, Boas, Arabidopsis thaliana Nd-1 Illumina short reads. (). , 2020 -
2019 | Preprint | Veröffentlicht | PUB-ID: 2934778Influence of neighboring small sequence variants on functional impact predictionPUB | PDF | Download (ext.) | Preprint
Baasner, Jan-Simon, Influence of neighboring small sequence variants on functional impact prediction. bioRxiv (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2937972Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH PahangPUB | Dateien verfügbar | DOI
Pucker, Boas, Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2936278Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH PahangPUB | Dateien verfügbar | DOI
Pucker, Boas, Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2938180Heterozygous SNVs between BoeWGS1.0 and PN40024PUB | Dateien verfügbar | DOI
Holtgräwe, Daniela, Heterozygous SNVs between BoeWGS1.0 and PN40024. (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2938178Homozygous SNVs between BoeWGS1.0 and PN40024PUB | Dateien verfügbar | DOI
Holtgräwe, Daniela, Homozygous SNVs between BoeWGS1.0 and PN40024. (). , 2019 -
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938013Genomics and Transcriptomics Advance in Plant SciencesPUB | PDF | DOI
Pucker, Boas, Genomics and Transcriptomics Advance in Plant Sciences. Molecular Approaches in Plant Biology and Environmental Challenges (). Singapore, 2019 -
2019 | Datenpublikation | PUB-ID: 2938185Description and mapping positions of BoeWGS1.0 contigsPUB | Dateien verfügbar | DOI
Holtgräwe, Daniela, Description and mapping positions of BoeWGS1.0 contigs. (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2937697Genome assemblies of Musa acuminata Dwarf CavendishPUB | Dateien verfügbar | DOI
Pucker, Boas, Genome assemblies of Musa acuminata Dwarf Cavendish. (). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936783Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in CaryophyllalesPUB | DOI | WoS | PubMed | Europe PMC
Sheehan, Hester, Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales . New Phytologist 227 (3). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene setPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | GenBank
Pucker, Boas, Chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLoS One 14 (5). , 2019 -
2019 | Datenpublikation | PUB-ID: 2949309Chromosome-level Assembly Reveals the Niederzenz (Nd-1) Genome Structure and Gene SetPUB | Dateien verfügbar | DOI
Pucker, Boas, Chromosome-level Assembly Reveals the Niederzenz (Nd-1) Genome Structure and Gene Set. (). , 2019 -
2019 | Bielefelder E-Dissertation | PUB-ID: 2935794De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant speciesPUB | PDF | DOI
Pucker, Boas, De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. (). Bielefeld, 2019 -
2019 | Datenpublikation | PUB-ID: 2934220RNA-Seq read coverage depth of splice sites in fungiPUB | Dateien verfügbar | DOI
Pucker, Boas, RNA-Seq read coverage depth of splice sites in fungi. (). , 2019 -
2019 | Datenpublikation | PUB-ID: 2934226RNA-Seq read coverage depth of splice sites in animalsPUB | Dateien verfügbar | DOI
Pucker, Boas, RNA-Seq read coverage depth of splice sites in animals. (). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935844Integrating Molecular Biology and Bioinformatics EducationPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Pucker, Boas, Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics 16 (3). , 2019 -
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937135Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana GenomePUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
Pucker, Boas, Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome. Genes 10 (9). , 2019 -
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079The evolution of betalain biosynthesis in CaryophyllalesPUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
Timoneda, Alfonso, The evolution of betalain biosynthesis in Caryophyllales. New Phytologist 224 (1). , 2019 -
2019 | Preprint | Veröffentlicht | PUB-ID: 2935737Next generation sequencing to investigate genomic diversity in CaryophyllalesPUB | PDF | Download (ext.) | Preprint
Pucker, Boas, Next generation sequencing to investigate genomic diversity in Caryophyllales. bioRxiv (). , 2019 -
2019 | Preprint | Veröffentlicht | PUB-ID: 2934975Mapping-based genome size estimationPUB | PDF | Download (ext.) | Preprint
Pucker, Boas, Mapping-based genome size estimation. bioRxiv (). , 2019 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930296Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applicationsPUB | PDF | DOI | WoS | PubMed | Europe PMC
Whitford, Christopher M., Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications. Journal of Biological Engineering 12 (1). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931064Modeling and Simulating the Aerobic Carbon Metabolism of a Green Microalga Using Petri Nets and New Concepts of VANESAPUB | PDF | DOI | WoS | PubMed | Europe PMC
Brinkrolf, Christoph, Modeling and Simulating the Aerobic Carbon Metabolism of a Green Microalga Using Petri Nets and New Concepts of VANESA. Journal of Integrative Bioinformatics 15 (3). , 2018 -
2018 | Datenpublikation | PUB-ID: 2931315RNA-Seq read coverage depth of splice sites in plantsPUB | Dateien verfügbar | DOI
Pucker, Boas, RNA-Seq read coverage depth of splice sites in plants. (). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932870Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomesPUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
Pucker, Boas, Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes. BMC Genomics 19 (1). , 2018 -
2018 | Diskussionspapier | Veröffentlicht | PUB-ID: 2920633Peer-review as a teaching methodPUB | PDF | Download (ext.)
Friedrich, Anja, Peer-review as a teaching method. 2, 2018 (). , 2018 -
2018 | Preprint | Veröffentlicht | PUB-ID: 2931225Harnessing natural diversity to identify key amino acid residues in prolidasePUB | Download (ext.) | Preprint
Schilbert, Hanna, Harnessing natural diversity to identify key amino acid residues in prolidase. bioRxiv (). , 2018 -
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2921026High Quality de Novo Transcriptome Assembly of Croton tigliumPUB | PDF | DOI | Download (ext.)
Haak, Markus, High Quality de Novo Transcriptome Assembly of Croton tiglium. Frontiers in Molecular Biosciences 5 (). , 2018 -
2017 | Datenpublikation | PUB-ID: 2930821Expanding The Genetic CodePUB | Dateien verfügbar | DOI
Karsten, Lennard, Expanding The Genetic Code. (). , 2017 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915524Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequencePUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
Pucker, Boas, Consideration of non-canonical splice sites improves gene prediction on the Arabidopsis thaliana Niederzenz-1 genome sequence. BMC Research Notes 10 (1). , 2017 -
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911462Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence dataPUB | DOI | WoS | PubMed | Europe PMC
Alkhateeb, Rabeaa, Refined annotation of the complete genome of the phytopathogenic and xanthan producing Xanthomonas campestris pv. campestris strain B100 based on RNA sequence data. Journal of Biotechnology 253 (). , 2017 -
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905844A de novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong SyntenyPUB | PDF | DOI | WoS | PubMed | Europe PMC | NCBI BioProject
Pucker, Boas, A de novo Genome Sequence Assembly of the Arabidopsis thaliana Accession Niederzenz-1 Displays Presence/Absence Variation and Strong Synteny. PLoS One 11 (10). , 2016 -
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2696778Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet ( Beta vulgaris )PUB | PDF | DOI | WoS | PubMed | Europe PMC
Stracke, Ralf, Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet ( Beta vulgaris ). BMC Plant Biology 14 (1). , 2014 -
2014 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2905012The Transformers. From Carbon Dioxide to BiofuelPUB | PDF | DOI
Fust, Annika, The Transformers. From Carbon Dioxide to Biofuel. (). , 2014