41 Publikationen

Alle markieren

[41]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919012
S. Jaenicke, S. Albaum, P. Blumenkamp, B. Linke, J. Stoye, and A. Goesmann, “Flexible metagenome analysis using the MGX framework”, Microbiome, 2018, 6, : 76.
PUB | DOI | WoS | PubMed | Europe PMC
 
[40]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556 OA
S. Jünemann, N. Kleinbölting, S. Jaenicke, C. Henke, J. Hassa, J. Nelkner, Y. Stolze, S. Albaum, A. Schlüter, A. Goesmann, et al., “Bioinformatics for NGS-based metagenomics and the application to biogas research”, Journal of Biotechnology, 2017, 261, 10-23.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[39]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
M. C. Martini, D. Wibberg, M. Lozano, G. Torres Tejerizo, F. J. Albicoro, S. Jaenicke, J. D. van Elsas, A. Petroni, M. P. Garcillan-Barcia, F. de la Cruz, et al., “Genomics of high molecular weight plasmids isolated from an on-farm biopurification system”, Scientific Reports, 2016, 6, : 28284.
PUB | DOI | WoS | PubMed | Europe PMC
 
[38]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
I. Maus, D. E. Koeck, K. G. Cibis, S. Hahnke, Y. S. Kim, T. Langer, J. Kreubel, M. Erhard, A. Bremges, S. Off, et al., “Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates”, Biotechnology for Biofuels, 2016, 9, : 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[37]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
V. Ortseifen, Y. Stolze, I. Maus, A. Sczyrba, A. Bremges, S. Albaum, S. Jaenicke, J. Fracowiak, A. Pühler, and A. Schlüter, “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”, Journal of Biotechnology, 2016, 231, 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190
C. Rückert, M. Kriete, S. Jaenicke, A. Winkler, and A. Tauch, “Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare”, Genome announcements, 2015, 3.
PUB | DOI | WoS | PubMed | Europe PMC
 
[35]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197
C. Rückert, M. Kriete, S. Jaenicke, A. Winkler, and A. Tauch, “Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise”, Genome announcements, 2015, 3.
PUB | DOI | WoS | PubMed | Europe PMC
 
[34]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
O. Rupp, K. Brinkrolf, C. Buerth, M. Kunigo, J. Schneider, S. Jaenicke, A. Goesmann, A. Pühler, K. - E. Jaeger, and J. F. Ernst, “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”, Journal of Biotechnology, 2015, 211, 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[33]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382 OA
Y. Stolze, M. Zakrzewski, I. Maus, F. G. Eikmeyer, S. Jaenicke, N. Rottmann, C. Siebner, A. Pühler, and A. Schlüter, “Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions”, Biotechnology for Biofuels, 2015, 8, : 14.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[32]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877
C. Rückert, A. Albersmeier, T. Busche, S. Jaenicke, A. Winkler, Ó. H. Friðjónsson, G. Ó. Hreggviðsson, C. Lambert, D. Badcock, K. Bernaerts, et al., “Complete genome sequence of Streptomyces lividans TK24”, Journal of Biotechnology, 2015, 199, 21-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[31]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719679
J. M. Vinardell, S. Acosta-Jurado, M. Göttfert, S. Zehner, A. Becker, I. Baena-Ropero, J. Blom, J. C. Crespo-Rivas, A. Goesmann, S. Jaenicke, et al., “The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean”, Molecular Plant-Microbe Interactions, 2015, 28, 811-824.
PUB | DOI | WoS | PubMed | Europe PMC
 
[30]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360
A. Tippelt, S. Möllmann, A. Albersmeier, S. Jaenicke, C. Rückert, and A. Tauch, “Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849”, Genome announcements, 2014, 2.
PUB | DOI | PubMed | Europe PMC
 
[29]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
B. Klippel, K. Sahm, A. Basner, S. Wiebusch, P. John, U. Lorenz, A. Peters, F. Abe, K. Takahashi, O. Kaiser, et al., “Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria”, Extremophiles, 2014, 18, 853-863.
PUB | DOI | WoS | PubMed | Europe PMC
 
[28]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605193 OA
F. G. Eikmeyer, A. Rademacher, A. Hanreich, M. Hennig, S. Jaenicke, I. Maus, D. Wibberg, M. Zakrzewski, A. Pühler, M. Klocke, et al., “Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms”, Biotechnology for Biofuels, 2013, 6, : 49.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[27]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2582332
L. C. Guimarães, S. C. Soares, A. Albersmeier, J. Blom, S. Jaenicke, V. Azevedo, F. Soriano, A. Tauch, and E. Trost, “Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis”, Genome announcements, 2013, 1, : e00264-13.
PUB | DOI | PubMed | Europe PMC
 
[26]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2558460
A. Roetzer, R. Diel, T. A. Kohl, C. Rückert, U. Nübel, J. Blom, T. Wirth, S. Jaenicke, S. Schuback, S. Rüsch-Gerdes, et al., “Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study”, PLoS medicine, 2013, 10, e1001387.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576080
J. Toepel, M. Illmer-Kephalides, S. Jaenicke, J. Straube, P. May, A. Goesmann, and O. Kruse, “New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics”, Plant Biotechnology Journal, 2013, 11, 717-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[24]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
D. E. Koeck, D. Wibberg, T. Koellmeier, J. Blom, S. Jaenicke, A. Winkler, A. Albersmeier, V. V. Zverlov, A. Pühler, W. H. Schwarz, et al., “Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation”, Journal of Biotechnology, 2013, 168, 62-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
[23]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557779
S. Weidner, B. Baumgarth, M. Göttfert, S. Jaenicke, A. Pühler, S. Schneiker-Bekel, J. Serrania, R. Szczepanowski, and A. Becker, “Genome Sequence of Sinorhizobium meliloti Rm41”, Genome Announcements, 2013, 1, e00013-12.
PUB | DOI | PubMed | Europe PMC
 
[22]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
V. M. Luque-Almagro, F. Acera, M. I. Igeño, D. Wibberg, M. D. Roldán, L. P. Sáez, M. Hennig, A. Quesada, M. J. Huertas, J. Blom, et al., “Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”, Environmental Microbiology, 2013, 15, 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
S. Bolzan de Campos, J. - W. Youn, R. Farina, S. Jaenicke, S. Jünemann, R. Szczepanowski, A. Beneduzi, L. K. Vargas, V. F. Wendisch, and L. Passaglia, “Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing”, Microbial Ecology, 2013, 65, 593-601.
PUB | DOI | WoS | PubMed | Europe PMC
 
[20]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160 OA
J. Schröder, I. Maus, K. Meyer, S. Wördemann, J. Blom, S. Jaenicke, J. Schneider, E. Trost, and A. Tauch, “Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient”, BMC Genomics, 2012, 13, : 141.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[19]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2473849
S. Weidner, A. Becker, I. Bonilla, S. Jaenicke, J. Lloret, I. Margaret, A. Pühler, J. E. Ruiz-Sainz, S. Schneiker-Bekel, R. Szczepanowski, et al., “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”, Journal of Bacteriology, 2012, 194, 1617-1618.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
M. Zakrzewski, A. Goesmann, S. Jaenicke, S. Jünemann, F. G. Eikmeyer, R. Szczepanowski, W. A. Al-Soud, S. Sørensen, A. Pühler, and A. Schlüter, “Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing”, Journal of Biotechnology, 2012, 158, 248-258.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
E. Trost, J. Blom, S. de Castro Soares, I. - H. Huang, A. Al-Dilaimi, J. Schröder, S. Jaenicke, F. A. Dorella, F. S. Rocha, A. Miyoshi, et al., “Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia”, Journal of bacteriology, 2012, 194, 3199-3215.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002
J. Schneider, O. Rupp, E. Trost, S. Jaenicke, V. Passoth, A. Goesmann, A. Tauch, and K. Brinkrolf, “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”, FEMS Yeast Research, 2012, 12, 382-386.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774
J. Schneider, H. Andrea, J. Blom, S. Jaenicke, C. Rückert, C. Schorsch, R. Szczepanowski, M. Farwick, A. Goesmann, A. Pühler, et al., “Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10”, Eukaryotic Cell, 2012, 11, 1582-1583.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530487
M. Filippini, W. Qi, S. Jaenicke, A. Goesmann, T. H. M. Smits, and H. C. Bagheri, “Genome Sequence of the Filamentous Bacterium Fibrisoma limi BUZ 3(T)”, Journal of Bacteriology, 2012, 194, 4445.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
I. Maus, D. Wibberg, R. Stantscheff, F. G. Eikmeyer, A. Seffner, J. Boelter, R. Szczepanowski, J. Blom, S. Jaenicke, H. König, et al., “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”, Journal of Bacteriology, 2012, 194, 5487-5488.
PUB | DOI | WoS | PubMed | Europe PMC
 
[12]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
A. B. Dohrmann, M. Küting, S. Jünemann, S. Jaenicke, A. Schlüter, and C. C. Tebbe, “Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties”, The ISME journal, 2012, 7, 37-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
D. Wibberg, J. Blom, S. Jaenicke, F. Kollin, O. Rupp, B. Scharf, S. Schneiker-Bekel, R. Szczepanowski, A. Goesmann, J. C. Setubal, et al., “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”, Journal of Biotechnology, 2011, 155, 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
A. Küberl, J. Schneider, G. G. Thallinger, I. Anderl, D. Wibberg, T. Hajek, S. Jaenicke, K. Brinkrolf, A. Goesmann, R. Szczepanowski, et al., “High-quality genome sequence of Pichia pastoris CBS7435”, Journal of Biotechnology, 2011, 154, 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
J. Schneider, J. Blom, S. Jaenicke, B. Linke, K. Brinkrolf, H. Neuweger, A. Tauch, and A. Goesmann, “RAPYD - Rapid Annotation Platform for Yeast Data”, Journal of Biotechnology, 2011, 155, 118-126.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2447730
J. M. Gonzalez, J. Pinhassi, B. Fernández-Gómez, M. Coll-Llado, M. Gonzalez-Velazquez, P. Puigbo, S. Jaenicke, L. Gomez-Consarnau, A. Fernandez-Guerra, A. Goesmann, et al., “Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134”, Applied and Environmental Microbiology, 2011, 77, 8676-8686.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
S. Jaenicke, M. Zakrzewski, S. Jünemann, A. Pühler, A. Goesmann, and A. Schlüter, in Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats (Ed.: F.J. de Bruijn), Wiley-Blackwell, 2011, p. 403-414.
PUB | DOI
 
[6]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
J. Blom, T. Jakobi, D. Doppmeier, S. Jaenicke, J. Kalinowski, J. Stoye, and A. Goesmann, “Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming”, Bioinformatics, 2011, 27, 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
S. Jaenicke, C. Ander, T. Bekel, R. Bisdorf, M. Dröge, K. - H. Gartemann, S. Jünemann, O. Kaiser, L. Krause, F. Tille, et al., “Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing”, PLoS ONE, 2011, 6, e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
E. Trost, L. Ott, J. Schneider, J. Schröder, S. Jaenicke, A. Goesmann, P. Husemann, J. Stoye, F. Alves Dorella, F. Souza Rocha, et al., “The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence”, BMC Genomics, 2010, 11, : 728.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
V. Mittard-Runte, T. Bekel, J. Blom, M. Dondrup, K. Henckel, S. Jaenicke, L. Krause, B. Linke, H. Neuweger, S. Schneiker-Bekel, et al., in Introduction to Marine Genomics (Advances in Marine Genomics) (Eds.: J.M. Cock, K. Tessmar-Raible, C. Boyen, F. Viard), Springer Netherlands, Netherlands, 2010, p. 315-396.
PUB | DOI
 
[2]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796644 OA
T. H. M. Smits, S. Jaenicke, F. Rezzonico, T. Kamber, A. Goesmann, J. E. Frey, and B. Duffy, “Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163(T) and comparative genomic insights into plant pathogenicity”, BMC Genomics, 2010, 11, 2.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[1]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497 OA
J. - P. Schlüter, J. Reinkensmeier, S. Daschkey, E. Evguenieva-Hackenberg, S. Janssen, S. Jaenicke, J. D. Becker, R. Giegerich, and A. Becker, “A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti”, BMC Genomics, 2010, 11, : 245.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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41 Publikationen

Alle markieren

[41]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919012
S. Jaenicke, S. Albaum, P. Blumenkamp, B. Linke, J. Stoye, and A. Goesmann, “Flexible metagenome analysis using the MGX framework”, Microbiome, 2018, 6, : 76.
PUB | DOI | WoS | PubMed | Europe PMC
 
[40]
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556 OA
S. Jünemann, N. Kleinbölting, S. Jaenicke, C. Henke, J. Hassa, J. Nelkner, Y. Stolze, S. Albaum, A. Schlüter, A. Goesmann, et al., “Bioinformatics for NGS-based metagenomics and the application to biogas research”, Journal of Biotechnology, 2017, 261, 10-23.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
[39]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
M. C. Martini, D. Wibberg, M. Lozano, G. Torres Tejerizo, F. J. Albicoro, S. Jaenicke, J. D. van Elsas, A. Petroni, M. P. Garcillan-Barcia, F. de la Cruz, et al., “Genomics of high molecular weight plasmids isolated from an on-farm biopurification system”, Scientific Reports, 2016, 6, : 28284.
PUB | DOI | WoS | PubMed | Europe PMC
 
[38]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
I. Maus, D. E. Koeck, K. G. Cibis, S. Hahnke, Y. S. Kim, T. Langer, J. Kreubel, M. Erhard, A. Bremges, S. Off, et al., “Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates”, Biotechnology for Biofuels, 2016, 9, : 171.
PUB | DOI | WoS | PubMed | Europe PMC
 
[37]
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
V. Ortseifen, Y. Stolze, I. Maus, A. Sczyrba, A. Bremges, S. Albaum, S. Jaenicke, J. Fracowiak, A. Pühler, and A. Schlüter, “An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant”, Journal of Biotechnology, 2016, 231, 268-279.
PUB | DOI | WoS | PubMed | Europe PMC
 
[36]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190
C. Rückert, M. Kriete, S. Jaenicke, A. Winkler, and A. Tauch, “Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare”, Genome announcements, 2015, 3.
PUB | DOI | WoS | PubMed | Europe PMC
 
[35]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197
C. Rückert, M. Kriete, S. Jaenicke, A. Winkler, and A. Tauch, “Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise”, Genome announcements, 2015, 3.
PUB | DOI | WoS | PubMed | Europe PMC
 
[34]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
O. Rupp, K. Brinkrolf, C. Buerth, M. Kunigo, J. Schneider, S. Jaenicke, A. Goesmann, A. Pühler, K. - E. Jaeger, and J. F. Ernst, “The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms”, Journal of Biotechnology, 2015, 211, 20-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
[33]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382 OA
Y. Stolze, M. Zakrzewski, I. Maus, F. G. Eikmeyer, S. Jaenicke, N. Rottmann, C. Siebner, A. Pühler, and A. Schlüter, “Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions”, Biotechnology for Biofuels, 2015, 8, : 14.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[32]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877
C. Rückert, A. Albersmeier, T. Busche, S. Jaenicke, A. Winkler, Ó. H. Friðjónsson, G. Ó. Hreggviðsson, C. Lambert, D. Badcock, K. Bernaerts, et al., “Complete genome sequence of Streptomyces lividans TK24”, Journal of Biotechnology, 2015, 199, 21-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
[31]
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719679
J. M. Vinardell, S. Acosta-Jurado, M. Göttfert, S. Zehner, A. Becker, I. Baena-Ropero, J. Blom, J. C. Crespo-Rivas, A. Goesmann, S. Jaenicke, et al., “The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean”, Molecular Plant-Microbe Interactions, 2015, 28, 811-824.
PUB | DOI | WoS | PubMed | Europe PMC
 
[30]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360
A. Tippelt, S. Möllmann, A. Albersmeier, S. Jaenicke, C. Rückert, and A. Tauch, “Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849”, Genome announcements, 2014, 2.
PUB | DOI | PubMed | Europe PMC
 
[29]
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
B. Klippel, K. Sahm, A. Basner, S. Wiebusch, P. John, U. Lorenz, A. Peters, F. Abe, K. Takahashi, O. Kaiser, et al., “Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria”, Extremophiles, 2014, 18, 853-863.
PUB | DOI | WoS | PubMed | Europe PMC
 
[28]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605193 OA
F. G. Eikmeyer, A. Rademacher, A. Hanreich, M. Hennig, S. Jaenicke, I. Maus, D. Wibberg, M. Zakrzewski, A. Pühler, M. Klocke, et al., “Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms”, Biotechnology for Biofuels, 2013, 6, : 49.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[27]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2582332
L. C. Guimarães, S. C. Soares, A. Albersmeier, J. Blom, S. Jaenicke, V. Azevedo, F. Soriano, A. Tauch, and E. Trost, “Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis”, Genome announcements, 2013, 1, : e00264-13.
PUB | DOI | PubMed | Europe PMC
 
[26]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2558460
A. Roetzer, R. Diel, T. A. Kohl, C. Rückert, U. Nübel, J. Blom, T. Wirth, S. Jaenicke, S. Schuback, S. Rüsch-Gerdes, et al., “Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study”, PLoS medicine, 2013, 10, e1001387.
PUB | DOI | WoS | PubMed | Europe PMC
 
[25]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2576080
J. Toepel, M. Illmer-Kephalides, S. Jaenicke, J. Straube, P. May, A. Goesmann, and O. Kruse, “New insights into Chlamydomonas reinhardtii hydrogen production processes by combined microarray/RNA-seq transcriptomics”, Plant Biotechnology Journal, 2013, 11, 717-733.
PUB | DOI | WoS | PubMed | Europe PMC
 
[24]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
D. E. Koeck, D. Wibberg, T. Koellmeier, J. Blom, S. Jaenicke, A. Winkler, A. Albersmeier, V. V. Zverlov, A. Pühler, W. H. Schwarz, et al., “Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation”, Journal of Biotechnology, 2013, 168, 62-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
[23]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557779
S. Weidner, B. Baumgarth, M. Göttfert, S. Jaenicke, A. Pühler, S. Schneiker-Bekel, J. Serrania, R. Szczepanowski, and A. Becker, “Genome Sequence of Sinorhizobium meliloti Rm41”, Genome Announcements, 2013, 1, e00013-12.
PUB | DOI | PubMed | Europe PMC
 
[22]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
V. M. Luque-Almagro, F. Acera, M. I. Igeño, D. Wibberg, M. D. Roldán, L. P. Sáez, M. Hennig, A. Quesada, M. J. Huertas, J. Blom, et al., “Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344”, Environmental Microbiology, 2013, 15, 253-270.
PUB | DOI | WoS | PubMed | Europe PMC
 
[21]
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
S. Bolzan de Campos, J. - W. Youn, R. Farina, S. Jaenicke, S. Jünemann, R. Szczepanowski, A. Beneduzi, L. K. Vargas, V. F. Wendisch, and L. Passaglia, “Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing”, Microbial Ecology, 2013, 65, 593-601.
PUB | DOI | WoS | PubMed | Europe PMC
 
[20]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160 OA
J. Schröder, I. Maus, K. Meyer, S. Wördemann, J. Blom, S. Jaenicke, J. Schneider, E. Trost, and A. Tauch, “Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient”, BMC Genomics, 2012, 13, : 141.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[19]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2473849
S. Weidner, A. Becker, I. Bonilla, S. Jaenicke, J. Lloret, I. Margaret, A. Pühler, J. E. Ruiz-Sainz, S. Schneiker-Bekel, R. Szczepanowski, et al., “Genome Sequence of the Soybean Symbiont Sinorhizobium fredii HH103”, Journal of Bacteriology, 2012, 194, 1617-1618.
PUB | DOI | WoS | PubMed | Europe PMC
 
[18]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
M. Zakrzewski, A. Goesmann, S. Jaenicke, S. Jünemann, F. G. Eikmeyer, R. Szczepanowski, W. A. Al-Soud, S. Sørensen, A. Pühler, and A. Schlüter, “Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing”, Journal of Biotechnology, 2012, 158, 248-258.
PUB | DOI | WoS | PubMed | Europe PMC
 
[17]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
E. Trost, J. Blom, S. de Castro Soares, I. - H. Huang, A. Al-Dilaimi, J. Schröder, S. Jaenicke, F. A. Dorella, F. S. Rocha, A. Miyoshi, et al., “Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia”, Journal of bacteriology, 2012, 194, 3199-3215.
PUB | DOI | WoS | PubMed | Europe PMC
 
[16]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474002
J. Schneider, O. Rupp, E. Trost, S. Jaenicke, V. Passoth, A. Goesmann, A. Tauch, and K. Brinkrolf, “Genome sequence of Wickerhamomyces anomalus DSM 6766 reveals genetic basis of biotechnologically important antimicrobial activities”, FEMS Yeast Research, 2012, 12, 382-386.
PUB | DOI | WoS | PubMed | Europe PMC
 
[15]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2544774
J. Schneider, H. Andrea, J. Blom, S. Jaenicke, C. Rückert, C. Schorsch, R. Szczepanowski, M. Farwick, A. Goesmann, A. Pühler, et al., “Draft Genome Sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10”, Eukaryotic Cell, 2012, 11, 1582-1583.
PUB | DOI | WoS | PubMed | Europe PMC
 
[14]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530487
M. Filippini, W. Qi, S. Jaenicke, A. Goesmann, T. H. M. Smits, and H. C. Bagheri, “Genome Sequence of the Filamentous Bacterium Fibrisoma limi BUZ 3(T)”, Journal of Bacteriology, 2012, 194, 4445.
PUB | DOI | WoS | PubMed | Europe PMC
 
[13]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
I. Maus, D. Wibberg, R. Stantscheff, F. G. Eikmeyer, A. Seffner, J. Boelter, R. Szczepanowski, J. Blom, S. Jaenicke, H. König, et al., “Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester”, Journal of Bacteriology, 2012, 194, 5487-5488.
PUB | DOI | WoS | PubMed | Europe PMC
 
[12]
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
A. B. Dohrmann, M. Küting, S. Jünemann, S. Jaenicke, A. Schlüter, and C. C. Tebbe, “Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties”, The ISME journal, 2012, 7, 37-49.
PUB | DOI | WoS | PubMed | Europe PMC
 
[11]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
D. Wibberg, J. Blom, S. Jaenicke, F. Kollin, O. Rupp, B. Scharf, S. Schneiker-Bekel, R. Szczepanowski, A. Goesmann, J. C. Setubal, et al., “Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid”, Journal of Biotechnology, 2011, 155, 50-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
[10]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2317371
A. Küberl, J. Schneider, G. G. Thallinger, I. Anderl, D. Wibberg, T. Hajek, S. Jaenicke, K. Brinkrolf, A. Goesmann, R. Szczepanowski, et al., “High-quality genome sequence of Pichia pastoris CBS7435”, Journal of Biotechnology, 2011, 154, 312-320.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
J. Schneider, J. Blom, S. Jaenicke, B. Linke, K. Brinkrolf, H. Neuweger, A. Tauch, and A. Goesmann, “RAPYD - Rapid Annotation Platform for Yeast Data”, Journal of Biotechnology, 2011, 155, 118-126.
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2447730
J. M. Gonzalez, J. Pinhassi, B. Fernández-Gómez, M. Coll-Llado, M. Gonzalez-Velazquez, P. Puigbo, S. Jaenicke, L. Gomez-Consarnau, A. Fernandez-Guerra, A. Goesmann, et al., “Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. MED134”, Applied and Environmental Microbiology, 2011, 77, 8676-8686.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
S. Jaenicke, M. Zakrzewski, S. Jünemann, A. Pühler, A. Goesmann, and A. Schlüter, in Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats (Ed.: F.J. de Bruijn), Wiley-Blackwell, 2011, p. 403-414.
PUB | DOI
 
[6]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
J. Blom, T. Jakobi, D. Doppmeier, S. Jaenicke, J. Kalinowski, J. Stoye, and A. Goesmann, “Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming”, Bioinformatics, 2011, 27, 1351-1358.
PUB | DOI | WoS | PubMed | Europe PMC
 
[5]
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
S. Jaenicke, C. Ander, T. Bekel, R. Bisdorf, M. Dröge, K. - H. Gartemann, S. Jünemann, O. Kaiser, L. Krause, F. Tille, et al., “Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing”, PLoS ONE, 2011, 6, e14519.
PUB | DOI | WoS | PubMed | Europe PMC
 
[4]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
E. Trost, L. Ott, J. Schneider, J. Schröder, S. Jaenicke, A. Goesmann, P. Husemann, J. Stoye, F. Alves Dorella, F. Souza Rocha, et al., “The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence”, BMC Genomics, 2010, 11, : 728.
PUB | DOI | WoS | PubMed | Europe PMC
 
[3]
2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
V. Mittard-Runte, T. Bekel, J. Blom, M. Dondrup, K. Henckel, S. Jaenicke, L. Krause, B. Linke, H. Neuweger, S. Schneiker-Bekel, et al., in Introduction to Marine Genomics (Advances in Marine Genomics) (Eds.: J.M. Cock, K. Tessmar-Raible, C. Boyen, F. Viard), Springer Netherlands, Netherlands, 2010, p. 315-396.
PUB | DOI
 
[2]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796644 OA
T. H. M. Smits, S. Jaenicke, F. Rezzonico, T. Kamber, A. Goesmann, J. E. Frey, and B. Duffy, “Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163(T) and comparative genomic insights into plant pathogenicity”, BMC Genomics, 2010, 11, 2.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[1]
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785497 OA
J. - P. Schlüter, J. Reinkensmeier, S. Daschkey, E. Evguenieva-Hackenberg, S. Janssen, S. Jaenicke, J. D. Becker, R. Giegerich, and A. Becker, “A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti”, BMC Genomics, 2010, 11, : 245.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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