PUB - Publikationen an der Universität Bielefeld

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• [20]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968524

  Ni, Z., Wolk, M., Jukes, G., Espinosa, K. M., Ahrends, R., Aimo, L., Alvarez-Jarreta, J., Andrews, S., Andrews, R., Bridge, A., et al. (2022). Guiding the choice of informatics software and tools for lipidomics research applications. Nature Methods .

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [19]
  

  2022 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2966976

  Ekroos, K., Ejsing, C., Liebisch, G., Koefeler, H., McDonald, J., Holcapek, M., Hoffmann, N., and Ahrends, R. (2022). Update on guidelines for lipidomics analysis and reporting. Journal of the American Oil Chemists' Society 99, 13-14.

  PUB | DOI | WoS
   
• [18]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2965107

  McDonald, J. G., Ejsing, C. S., Kopczynski, D., Holcapek, M., Aoki, J., Arita, M., Arita, M., Baker, E. S., Bertrand-Michel, J., Bowden, J. A., et al. (2022). Introducing the Lipidomics Minimal Reporting Checklist. Nature Metabolism .

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [17]
  

  2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2962357

  Kopczynski, D., Hoffmann, N., Peng, B., Liebisch, G., Spener, F., and Ahrends, R. (2022). Goslin 2.0 Implements the Recent Lipid Shorthand Nomenclature for MS-Derived Lipid Structures. Analytical Chemistry:acs.analchem.1c05430.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [16]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959919

  Borgmeyer, M., Coman, C., Has, C., Schött, H. - F., Li, T., Westhoff, P., Cheung, Y. F. H., Hoffmann, N., Yuanxiang, P. A., Behnisch, T., et al. (2021). Multiomics of synaptic junctions reveals altered lipid metabolism and signaling following environmental enrichment. Cell Reports 37:109797.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958747

  Kofeler, H. C., Ahrends, R., Baker, E. S., Ekroos, K., Han, X., Hoffmann, N., Holcapek, M., Wenk, M. R., and Liebisch, G. (2021). Recommendations for Good Practice in Mass Spectrometry-Based Lipidomics. Journal of Lipid Research 62:100138.

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• [14]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956707

  Peng, B., Kopczynski, D., Pratt, B. S., Ejsing, C. S., Burla, B., Hermansson, M., Benke, P. I., Tan, S. H., Chan, M. Y., Torta, F., et al. (2020). LipidCreator workbench to probe the lipidomic landscape. Nature Communications 11:2057.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [13]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956705

  Kopczynski, D., Hoffmann, N., Peng, B., and Ahrends, R. (2020). Goslin: A Grammar of Succinct Lipid Nomenclature. Analytical Chemistry 92, 10957-10960.

  PUB | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [12]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956709

  Wibberg, D., Batut, B., Belmann, P., Blom, J., Glöckner, F. O., Grüning, B., Hoffmann, N., Kleinbölting, N., Rahn, R., Rey, M., et al. (2019). The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR. F1000Research 8:1877.

  PUB | DOI
   
• [11]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956712

  Hoffmann, N., Rein, J., Sachsenberg, T., Hartler, J., Haug, K., Mayer, G., Alka, O., Dayalan, S., Pearce, J. T. M., Rocca-Serra, P., et al. (2019). mzTab-M: A Data Standard for Sharing Quantitative Results in Mass Spectrometry Metabolomics. Analytical Chemistry 91, 3302-3310.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [10]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956711

  Hoffmann, N., Hartler, J., and Ahrends, R. (2019). jmzTab-M: A Reference Parser, Writer, and Validator for the Proteomics Standards Initiative mzTab 2.0 Metabolomics Standard. Analytical Chemistry 91, 12615-12618.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [9]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956710

  Stanstrup, J., Broeckling, C., Helmus, R., Hoffmann, N., Mathé, E., Naake, T., Nicolotti, L., Peters, K., Rainer, J., Salek, R., et al. (2019). The metaRbolomics Toolbox in Bioconductor and beyond. Metabolites 9:200.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [8]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956713

  Peng, B., Geue, S., Coman, C., Münzer, P., Kopczynski, D., Has, C., Hoffmann, N., Manke, M. - C., Lang, F., Sickmann, A., et al. (2018). Identification of key lipids critical for platelet activation by comprehensive analysis of the platelet lipidome. Blood 132, e1-e12.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956714

  Schwudke, D., Shevchenko, A., Hoffmann, N., and Ahrends, R. (2017). Lipidomics informatics for life-science. Journal of Biotechnology 261, 131-136.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [6]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2715682

  Henning, P., Kuich, J. L., Hoffmann, N., and Stefan, K. (2015). Maui-VIA: a user-friendly software for visual identification, alignment, correction, and quantification of gas chromatography–mass spectrometry data. Frontiers in Bioengineering and Biotechnology 2, 84.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [5]
  

  2014 | Bielefelder E-Dissertation | PUB-ID: 2677466

  Hoffmann, N. (2014). Computational methods for high-throughput metabolomics. Bielefeld: Universität Bielefeld.

  PUB | PDF
   
• [4]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941

  Hoffmann, N., Wilhelm, M., Doebbe, A., Niehaus, K., and Stoye, J. (2014). BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry. Bioinformatics 30, 988-995.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [3]
  

  2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239

  Hoffmann, N., Keck, M., Neuweger, H., Wilhelm, M., Högy, P., Niehaus, K., and Stoye, J. (2012). Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. BMC Bioinformatics 13:21.

  PUB | PDF | DOI | WoS | PubMed | Europe PMC
   
• [2]
  

  2012 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2468382

  Hoffmann, N., and Stoye, J. (2012). “Generic Software Frameworks for GC-MS Based Metabolomics” in Metabolomics, Roessner, U. ed. (InTech), 73-98.

  PUB | PDF | DOI | Download (ext.)
   
• [1]
  

  2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591319

  Hoffmann, N., and Stoye, J. (2009). ChromA: signal-based retention time alignment for chromatography-mass spectrometry data. Bioinformatics 25, 2080-2081.

  PUB | DOI | WoS | PubMed | Europe PMC