20 Publikationen
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2968524Ni, Zhixu, Wolk, Michele, Jukes, Geoff, Espinosa, Karla Mendivelso, Ahrends, Robert, Aimo, Lucila, Alvarez-Jarreta, Jorge, et al. 2022. “Guiding the choice of informatics software and tools for lipidomics research applications”. Nature Methods .
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2022 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2966976Ekroos, Kim, Ejsing, Christer, Liebisch, Gerhard, Koefeler, Harald, McDonald, Jeffrey, Holcapek, Michal, Hoffmann, Nils, and Ahrends, Robert. 2022. “Update on guidelines for lipidomics analysis and reporting”, Journal of the American Oil Chemists' Society, 99 (Suppl. 1): 13-14.
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2965107McDonald, Jeffrey G, Ejsing, Christer S, Kopczynski, Dominik, Holcapek, Michal, Aoki, Junken, Arita, Makoto, Arita, Masanori, et al. 2022. “Introducing the Lipidomics Minimal Reporting Checklist”. Nature Metabolism .
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2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2962357Kopczynski, Dominik, Hoffmann, Nils, Peng, Bing, Liebisch, Gerhard, Spener, Friedrich, and Ahrends, Robert. 2022. “Goslin 2.0 Implements the Recent Lipid Shorthand Nomenclature for MS-Derived Lipid Structures”. Analytical Chemistry: acs.analchem.1c05430.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959919Borgmeyer, Maximilian, Coman, Cristina, Has, Canan, Schött, Hans-Frieder, Li, Tingting, Westhoff, Philipp, Cheung, Yam F.H., et al. 2021. “Multiomics of synaptic junctions reveals altered lipid metabolism and signaling following environmental enrichment”. Cell Reports 37 (1): 109797.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2958747Kofeler, Harald C., Ahrends, Robert, Baker, Erin S., Ekroos, Kim, Han, Xianlin, Hoffmann, Nils, Holcapek, Michal, Wenk, Markus R., and Liebisch, Gerhard. 2021. “Recommendations for Good Practice in Mass Spectrometry-Based Lipidomics”. Journal of Lipid Research 62: 100138.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956707Peng, Bing, Kopczynski, Dominik, Pratt, Brian S., Ejsing, Christer S., Burla, Bo, Hermansson, Martin, Benke, Peter Imre, et al. 2020. “LipidCreator workbench to probe the lipidomic landscape”. Nature Communications 11 (1): 2057.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956709Wibberg, Daniel, Batut, Bérénice, Belmann, Peter, Blom, Jochen, Glöckner, Frank Oliver, Grüning, Björn, Hoffmann, Nils, et al. 2019. “The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR”. F1000Research 8: 1877.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956712Hoffmann, Nils, Rein, Joel, Sachsenberg, Timo, Hartler, Jürgen, Haug, Kenneth, Mayer, Gerhard, Alka, Oliver, et al. 2019. “mzTab-M: A Data Standard for Sharing Quantitative Results in Mass Spectrometry Metabolomics”. Analytical Chemistry 91 (5): 3302-3310.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956711Hoffmann, Nils, Hartler, Jürgen, and Ahrends, Robert. 2019. “jmzTab-M: A Reference Parser, Writer, and Validator for the Proteomics Standards Initiative mzTab 2.0 Metabolomics Standard”. Analytical Chemistry 91 (20): 12615-12618.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956710Stanstrup, Jan, Broeckling, Corey, Helmus, Rick, Hoffmann, Nils, Mathé, Ewy, Naake, Thomas, Nicolotti, Luca, et al. 2019. “The metaRbolomics Toolbox in Bioconductor and beyond”. Metabolites 9 (10): 200.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956713Peng, Bing, Geue, Sascha, Coman, Cristina, Münzer, Patrick, Kopczynski, Dominik, Has, Canan, Hoffmann, Nils, et al. 2018. “Identification of key lipids critical for platelet activation by comprehensive analysis of the platelet lipidome”. Blood 132 (5): e1-e12.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956714Schwudke, D., Shevchenko, A., Hoffmann, Nils, and Ahrends, R. 2017. “Lipidomics informatics for life-science”. Journal of Biotechnology 261: 131-136.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2715682Henning, Peter, Kuich, Julius Lloyd, Hoffmann, Nils, and Stefan, Kempa. 2015. “Maui-VIA: a user-friendly software for visual identification, alignment, correction, and quantification of gas chromatography–mass spectrometry data”. Frontiers in Bioengineering and Biotechnology 2 (84): 84.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941Hoffmann, Nils, Wilhelm, Mathias, Doebbe, Anja, Niehaus, Karsten, and Stoye, Jens. 2014. “BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry”. Bioinformatics 30 (7): 988-995.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239Hoffmann, Nils, Keck, Matthias, Neuweger, Heiko, Wilhelm, Mathias, Högy, Petra, Niehaus, Karsten, and Stoye, Jens. 2012. “Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets”. BMC Bioinformatics 13 (1): 21.
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2012 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2468382Hoffmann, Nils, and Stoye, Jens. 2012. “Generic Software Frameworks for GC-MS Based Metabolomics”. In Metabolomics, ed. Ute Roessner, 73-98. InTech.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591319Hoffmann, Nils, and Stoye, Jens. 2009. “ChromA: signal-based retention time alignment for chromatography-mass spectrometry data”. Bioinformatics 25 (16): 2080-2081.