Andreas Schlüter

aschluet@cebitec.uni-bielefeld.de
ORCID logo https://orcid.org/0000-0003-4830-310X

PEVZ-ID
55545

160 Publikationen

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  • [160]
    2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2985402
    Heyer R, Hellwig P, Maus I, Walke D, Schlüter A, Hassa J, Sczyrba A, Tubbesing TJ, Klocke M, Mächtig T, Schallert K, Seick I, Reichl U, Benndorf D (2024)
    Breakdown of hardly degradable carbohydrates (lignocellulose) in a two-stage anaerobic digestion plant is favored in the main fermenter.
    Water Research 250: 121020.
    PUB | DOI
     
  • [159]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2977923 OA
    Nelkner J, Huang L, Lin TW, Schulz A, Osterholz B, Henke C, Blom J, Pühler A, Sczyrba A, Schlüter A (2023)
    Abundance, classification and genetic potential of Thaumarchaeota in metagenomes of European agricultural soils: a meta-analysis.
    Environmental Microbiome 18(1): 26.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [158]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2983209 OA
    Hassa J, Tubbesing TJ, Maus I, Heyer R, Benndorf D, Effenberger M, Henke C, Osterholz B, Beckstette M, Pühler A, Sczyrba A, Schlüter A (2023)
    Uncovering Microbiome Adaptations in a Full-Scale Biogas Plant: Insights from MAG-Centric Metagenomics and Metaproteomics.
    Microorganisms 11(10): 2412.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [157]
    2023 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2983197 OA
    Pühler A, Lübke N-C, Maus I, Schlüter A (Eds) (2023)
    Participation of Bielefeld University Teams in the iGEM Competition of Synthetic Biology.
    Bielefeld: Bielefeld University, Center for Biotechnology (CeBiTec).
    PUB | PDF | DOI | Download (ext.)
     
  • [156]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967793 OA
    Köller N, Hahnke S, Zverlov V, Wibberg D, Klingl A, Busche T, Klocke M, Pühler A, Schlüter A, Liebl W, Maus I (2022)
    Anaeropeptidivorans aminofermentans gen. nov., sp. nov., a mesophilic proteolytic salt-tolerant bacterium isolated from a laboratory-scale biogas fermenter, and emended description of Clostridium colinum.
    International Journal of Systematic and Evolutionary Microbiology 72(12).
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [155]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966901 OA
    Maus I, Wibberg D, Belmann P, Hahnke S, Huang L, Spröer C, Bunk B, Blom J, Sczyrba A, Pühler A, Klocke M, Schlüter A (2022)
    The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses.
    Frontiers in Microbiology 13: 1032515.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [154]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2961071 OA
    Willenbücher K, Wibberg D, Huang L, Conrady M, Ramm P, Gätcke J, Busche T, Brandt C, Szewzyk U, Schlüter A, Barrero Canosa J, Maus I (2022)
    Phage Genome Diversity in a Biogas-Producing Microbiome Analyzed by Illumina and Nanopore GridION Sequencing.
    Microorganisms 10(2): 368.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [153]
    2022 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2965631 OA
    Castellani LG, Luchetti A, Nilsson JF, Pérez-Giménez J, Struck B, Schlüter A, Pühler A, Niehaus K, Romero D, Pistorio M, Torres Tejerizo G (2022)
    RcgA and RcgR, Two Novel Proteins Involved in the Conjugative Transfer of Rhizobial Plasmids.
    mBio.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [152]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956084 OA
    Hassa J, Klang J, Benndorf D, Pohl M, Hülsemann B, Mächtig T, Effenberger M, Pühler A, Schlüter A, Theuerl S (2021)
    Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants.
    Microorganisms 9(7): 1457.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [151]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957996 OA
    Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A (2021)
    Genome Analyses of the Less Aggressive Rhizoctonia solani AG1-IB Isolates 1/2/21 and O8/2 Compared to the Reference AG1-IB Isolate 7/3/14.
    Journal of Fungi 7(10): 832.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [150]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951537 OA
    Tabacchioni S, Passato S, Ambrosino P, Huang L, Caldara M, Cantale C, Hett J, Del Fiore A, Fiore A, Schlüter A, Sczyrba A, Maestri E, Marmiroli N, Neuhoff D, Nesme J, Sørensen SJ, Aprea G, Nobili C, Presenti O, Giovannetti G, Giovannetti C, Pihlanto A, Brunori A, Bevivino A (2021)
    Identification of Beneficial Microbial Consortia and Bioactive Compounds with Potential as Plant Biostimulants for a Sustainable Agriculture.
    Microorganisms 9(2): 426.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [149]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951288 OA
    Castellani LG, Luchetti A, Nilsson JF, Pérez-Giménez J, Wegener C, Schlüter A, Pühler A, Lagares A, Brom S, Pistorio M, Niehaus K, Torres Tejerizo GA (2021)
    Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa.
    Frontiers in Plant Science 12: 642576.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [148]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961
    Nilsson JF, Castellani LG, Draghi WO, Mogro EG, Wibberg D, Winkler A, Hansen LH, Schlüter A, Pühler A, Kalinowski J, Torres Tejerizo GA, Pistorio M (2021)
    Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress.
    FEMS Microbiology Ecology 97(1): fiaa235.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [147]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939840 OA
    Hassa J, Wibberg D, Maus I, Pühler A, Schlüter A (2020)
    Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter.
    Microorganisms 8(1): 13.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [146]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941645 OA
    Maus I, Klocke M, Derenkó J, Stolze Y, Beckstette M, Jost C, Wibberg D, Blom J, Henke C, Willenbücher K, Rumming M, Rademacher A, Pühler A, Sczyrba A, Schlüter A (2020)
    Impact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics.
    Environmental Microbiome 15(1): 7.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [145]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597 OA
    Maus I, Tubbesing TJ, Wibberg D, Heyer R, Hassa J, Tomazetto G, Huang L, Bunk B, Spröer C, Benndorf D, Zverlov V, Pühler A, Klocke M, Sczyrba A, Schlüter A (2020)
    The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses.
    Microorganisms 8(12): 2024.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [144]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839 OA
    Nelkner J, Tejerizo GT, Hassa J, Lin TW, Witte J, Verwaaijen B, Winkler A, Bunk B, Spröer C, Overmann J, Grosch R, Pühler A, Schlüter A (2019)
    Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.
    Genes 10(8): 601.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [143]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899 OA
    López JL, Lozano MJ, Lagares A, Fabre ML, Draghi WO, Del Papa MF, Pistorio M, Becker A, Wibberg D, Schlüter A, Pühler A, Blom J, Goesmann A, Lagares A (2019)
    Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry.
    mBio 10(3): e00505-19.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [142]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923 OA
    Nelkner J, Henke C, Lin TW, Pätzold W, Hassa J, Jaenicke S, Grosch R, Pühler A, Sczyrba A, Schlüter A (2019)
    Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes.
    Genes 10(6): 424.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [141]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556 OA
    Verwaaijen B, Wibberg D, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A (2019)
    A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani.
    Scientific Reports 9(1): 7221.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [140]
    2019 | Preprint | Veröffentlicht | PUB-ID: 2939887
    Campanaro S, Treu L, Rodriguez-R LM, Kovalovszki A, Ziels RM, Maus I, Zhu X, Kougias PG, Basile A, Luo G, Schlüter A, Konstantinidis KT, Angelidaki I (2019)
    The anaerobic digestion microbiome: a collection of 1600 metagenome-assembled genomes shows high species diversity related to methane production.
    bioRxiv.
    PUB | Download (ext.) | Preprint
     
  • [139]
    2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570
    Castellani LG, Nilsson JF, Wibberg D, Schlüter A, Pühler A, Brom S, Pistorio M, Tejerizo GT (2019)
    Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83.
    Plasmid 103: 9-16.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [138]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920168 OA
    Tomazetto G, Hahnke S, Wibberg D, Pühler A, Klocke M, Schlüter A (2018)
    Proteiniphilum saccharofermentans str. M3/6 T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions.
    Biotechnology Reports 18: e00254.
    PUB | PDF | DOI
     
  • [137]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920169
    Salto IP, Torres Tejerizo G, Wibberg D, Pühler A, Schlüter A, Pistorio M (2018)
    Comparative genomic analysis of Acinetobacter spp. plasmids originating from clinical settings and environmental habitats.
    Scientific Reports 8(1): 7783.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [136]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920170
    Hassa J, Maus I, Off S, Pühler A, Scherer P, Klocke M, Schlüter A (2018)
    Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants.
    Applied Microbiology and Biotechnology 102(12): 5045-5063.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [135]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
    Maus I, Rumming M, Bergmann I, Heeg K, Pohl M, Nettmann E, Jaenicke S, Blom J, Pühler A, Schlüter A, Sczyrba A, Klocke M (2018)
    Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors.
    Biotechnology for Biofuels 11(1): 167.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [134]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918205
    Pechtl A, Rückert C, Maus I, Koeck DE, Trushina N, Kornberger P, Schwarz WH, Schlüter A, Liebl W, Zverlov VV (2018)
    Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing.
    Genome Announcements 6(6): e01493-17.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [133]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
    Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A (2018)
    Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants.
    Microbial Biotechnology 11(4): 667-679.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [132]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920275
    Sommermann L, Geistlinger J, Wibberg D, Deubel A, Zwanzig J, Babin D, Schlüter A, Schellenberg I (2018)
    Fungal community profiles in agricultural soils of a long-term field trial under different tillage, fertilization and crop rotation conditions analyzed by high-throughput ITS-amplicon sequencing.
    PLOS ONE 13(4): e0195345.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [131]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037
    Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A (2018)
    Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome.
    Journal of Biotechology 267: 12-18.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [130]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920173
    Wibberg D, Salto IP, Eikmeyer FG, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2018)
    Complete Genome Sequencing of Acinetobacter baumannii Strain K50 Discloses the Large Conjugative Plasmid pK50a Encoding Carbapenemase OXA-23 and Extended-Spectrum β-Lactamase GES-11.
    Antimicrobial Agents and Chemotherapy 62(5): e00212-18.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [129]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911007
    Ampattu BJ, Hagmann L, Liang C, Dittrich M, Schlüter A, Blom J, Krol E, Goesmann A, Becker A, Dandekar T, Mueller T, Schoen C (2017)
    Transcriptomic buffering of cryptic genetic variation contributes to meningococcal virulence.
    BMC Genomics 18(1): 282.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [128]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516 OA
    Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, Off S, Stantscheff R, Zverlov VV, Schwarz WH, König H, Liebl W, Scherer P, McHardy AC, Sczyrba A, Klocke M, Pühler A, Schlüter A (2017)
    Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.
    Biotechnology for Biofuels 10(1): 264.
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [127]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114 OA
    Verwaaijen B, Wibberg D, Kröber M, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A (2017)
    The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.).
    PLOS ONE 12(5): e0177278.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [126]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916490
    Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A (2017)
    Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3.
    Archives of Microbiology 199(7): 1065-1068.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [125]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910369 OA
    Maus I, Kim YS, Wibberg D, Stolze Y, Off S, Antonczyk S, Pühler A, Scherer P, Schlüter A (2017)
    Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis.
    Journal of Microbiology and Biotechnology 27(2): 321-334.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [124]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419 OA
    Torres Tejerizo GA, Wibberg D, Winkler A, Ormeño-Orrillo E, Martínez-Romero E, Niehaus K, Pühler A, Kalinowski J, Lagares A, Schlüter A, Pistorio M (2017)
    Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T.
    Genome Announcements 5(4): e01513-16.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [123]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
    Jünemann S, Kleinbölting N, Jaenicke S, Henke C, Hassa J, Nelkner J, Stolze Y, Albaum S, Schlüter A, Goesmann A, Sczyrba A, Stoye J (2017)
    Bioinformatics for NGS-based metagenomics and the application to biogas research.
    Journal of Biotechnology 261(SI): 10-23.
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [122]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916470
    Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A (2017)
    The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor.
    Journal of Biotechnology 257: 178-186.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [121]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910373
    Bartholomäus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2017)
    Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales.
    Archives of Virology 162(2): 555-559.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [120]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916406
    Lasek R, Dziewit L, Ciok A, Decewicz P, Romaniuk K, Jedrys Z, Wibberg D, Schlüter A, Pühler A, Bartosik D (2017)
    Genome content, metabolic pathways and biotechnological potential of the psychrophilic Arctic bacterium Psychrobacter sp DAB_AL43B, a source and a host of novel Psychrobacter-specific vectors.
    Journal of Biotechnology 263: 64-74.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [119]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916435
    Czarnecki J, Dziewit L, Puzyna M, Prochwicz E, Tudek A, Wibberg D, Schlüter A, Pühler A, Bartosik D (2017)
    Lifestyle-determining extrachromosomal replicon pAMV1 and its contribution to the carbon metabolism of the methylotrophic bacterium Paracoccus aminovorans JCM 7685.
    Environmental Microbiology 19(11): 4536-4550.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [118]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911777
    Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
    Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste.
    Journal of Biotechnology 247: 1-5.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [117]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
    Heyer R, Benndorf D, Kohrs F, De Vrieze J, Boon N, Hoffmann M, Rapp E, Schlüter A, Sczyrba A, Reichl U (2016)
    Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type.
    Biotechnology for Biofuels 9(1): 155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [116]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917144
    Wibberg D, Andersson L, Tzelepis G, Rupp O, Blom J, Jelonek L, Pühler A, Fogelqvist J, Varrelmann M, Schlüter A, Dixelius C (2016)
    Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes.
    BMC Genomics 17(1): 245.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [115]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920209
    Lebuhn M, Derenkó J, Rademacher A, Helbig S, Munk B, Pechtl A, Stolze Y, Prowe S, Schwarz W, Schlüter A, Liebl W, Klocke M (2016)
    DNA and RNA Extraction and Quantitative Real-Time PCR-Based Assays for Biogas Biocenoses in an Interlaboratory Comparison.
    Bioengineering 3(1): 7.
    PUB | DOI
     
  • [114]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431
    Bartholomaeus A, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
    Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV.
    PLOS ONE 11(11): e0165965.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [113]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260
    Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, Jaenicke S, Goesmann A, Sczyrba A, Scherer P, König H, Schwarz WH, Zverlov VV, Liebl W, Pühler A, Schlüter A, Klocke M (2016)
    Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.
    Biotechnology for Biofuels 9(1): 171.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [112]
    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904691
    Martini MC, Wibberg D, Lozano M, Torres Tejerizo G, Albicoro FJ, Jaenicke S, van Elsas JD, Petroni A, Garcillan-Barcia MP, de la Cruz F, Schlüter A, Pühler A, Pistorio M, Lagares A, Del Papa MF (2016)
    Genomics of high molecular weight plasmids isolated from an on-farm biopurification system.
    Scientific Reports 6(1): 28284.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993 OA
    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor.
    Genome Announcements 4(4): e00687-16.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970 OA
    Maus I, Wibberg D, Winkler A, Pühler A, Schnürer A, Schlüter A (2016)
    Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor.
    Genome Announcements 4(3): e00568-16.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978 OA
    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor.
    Genome Announcements 4(3): e00609-16.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815 OA
    Stolze Y, Bremges A, Rumming M, Henke C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016)
    Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants.
    Biotechnology for Biofuels 9(1): 156.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633 OA
    Lux M, Krüger J, Rinke C, Maus I, Schlüter A, Woyke T, Sczyrba A, Hammer B (2016)
    acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data.
    BMC Bioinformatics 17(1): 543.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904809
    Klassen V, Blifernez-Klassen O, Wobbe L, Schlüter A, Kruse O, Mussgnug JH (2016)
    Efficiency and biotechnological aspects of biogas production from microalgal substrates.
    Journal of Biotechnology 234: 7-26.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2016)
    Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")".
    Journal of Biotechnology 237: 35.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908260
    Torres Tejerizo GA, Antonio Rogel M, Ormeno-Orrillo E, Julia Althabegoiti M, Fernanda Nilsson J, Niehaus K, Schlüter A, Pühler A, Florencia Del Papa M, Lagares A, Martinez-Romero E, Pistorio M (2016)
    Rhizobium favelukesii sp nov., isolated from the root nodules of alfalfa (Medicago sativa L).
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 66(11): 4451-4457.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917142
    Wibberg D, Andersson L, Rupp O, Goesmann A, Pühler A, Varrelmann M, Dixelius C, Schlüter A (2016)
    Draft genome sequence of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB strain BBA69670.
    Journal of Biotechnology 222: 11-12.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
    Maus I, Cibis KG, Bremges A, Stolze Y, Wibberg D, Tomazetto G, Blom J, Sczyrba A, König H, Pühler A, Schlüter A (2016)
    Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment.
    Journal of Biotechnology 232: 50-60.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
    Wibberg D, Bremges A, Dammann-Kalinowski T, Maus I, Igeño MI, Vogelsang R, König C, Luque-Almagro VM, Roldán MD, Sczyrba A, Moreno-Vivián C, Blasco R, Pühler A, Schlüter A (2016)
    Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing.
    Journal of Biotechnology 232: 61-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126
    Liebe S, Wibberg D, Winkler A, Pühler A, Schlüter A, Varrelmann M (2016)
    Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes.
    FEMS Microbiology Ecology 92(2): fiw004.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675
    Krahn T, Wibberg D, Maus I, Winkler A, Bontron S, Sczyrba A, Nordmann P, Pühler A, Poirel L, Schlüter A (2016)
    Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene.
    Antimicrobial Agents and Chemotherapy 60(5): 3032-3040.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905504
    Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A (2016)
    Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing.
    Journal of Biotechnology 231: 212-223.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905629
    Tomazetto G, Hahnke S, Koeck DE, Wibberg D, Maus I, Pühler A, Klocke M, Schlüter A (2016)
    Complete genome analysis of Clostridium bornimense strain M2/40(T). A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor.
    Journal of Biotechnology 232: 38-49.
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    2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234
    Ortseifen V, Stolze Y, Maus I, Sczyrba A, Bremges A, Albaum S, Jaenicke S, Fracowiak J, Pühler A, Schlüter A (2016)
    An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant.
    Journal of Biotechnology 231: 268-279.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906 OA
    Bremges A, Maus I, Belmann P, Eikmeyer FG, Winkler A, Albersmeier A, Pühler A, Schlüter A, Sczyrba A (2015)
    Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant.
    GigaScience 4(1): 33.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946456
    Theuerl S, Kohrs F, Benndorf D, Maus I, Wibberg D, Schlüter A, Kausmann R, Heiermann M, Rapp E, Reichl U, Pühler A, Klocke M (2015)
    Community shifts in a well-operating agricultural biogas plant: how process variations are handled by the microbiome.
    Applied Microbiology and Biotechnology 99(18): 7791-7803.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748
    Krahn T, Wibberg D, Maus I, Winkler A, Pühler A, Poirel L, Schlüter A (2015)
    Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses.
    Genome Announcements 3(4): e00850-15.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731076
    Dziewit L, Pyzik A, Szuplewska M, Matlakowska R, Mielnicki S, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
    Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals.
    Frontiers in Microbiology 6: 152.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2778477
    Dziewit L, Czarnecki J, Prochwicz E, Wibberg D, Schlüter A, Pühler A, Bartosik D (2015)
    Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686.
    Frontiers in Microbiology 6: 852.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901297 OA
    Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A (2015)
    Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R-solani AG1-IA, AG1-IB, AG3 and AG8 Isolates.
    Plos One 10(12): e0144769.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064 OA
    Krahn T, Wibberg D, Maus I, Winkler A, Nordmann P, Pühler A, Poirel L, Schlüter A (2015)
    Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1.
    Genome Announcements 3(5): e01008-15.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2768627 OA
    Eikmeyer FG, Heinl S, Marx H, Pühler A, Grabherr R, Schlüter A (2015)
    Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing.
    PLoS ONE 10(7): e0134149.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382 OA
    Stolze Y, Zakrzewski M, Maus I, Eikmeyer FG, Jaenicke S, Rottmann N, Siebner C, Pühler A, Schlüter A (2015)
    Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions.
    Biotechnology for Biofuels 8(1): 14.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833
    Kohrs F, Wolter S, Benndorf D, Heyer R, Hoffmann M, Rapp E, Bremges A, Sczyrba A, Schlüter A, Reichl U (2015)
    Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities.
    Proteomics 15(20): 3585-3589.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2901466
    Osterholz B, Wiebke P, Fust A, Rumming M, Schlüter A, Sczyrba A (2015)
    A Bioinformatics Pipeline for the Detection of β-lactamase Genes in Metagenome Sequence Data and its Application to Production-Scale Biogas Plants.
    Presented at the 3rd International Symposium on the environmental Dimension of Antibiotic Resistance, Wernigerode.
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144
    Wibberg D, Rupp O, Jelonek L, Kröber M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Pühler A, Schlüter A (2015)
    Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system.
    Journal of Biotechnology 203: 19-21.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2773134
    Martini MC, Albicoro FJ, Nour E, Schlüter A, van Elsas JD, Springael D, Smalla K, Pistorio M, Lagares A, Florencia Del Papa M (2015)
    Characterization of a collection of plasmid-containing bacteria isolated from an on-farm biopurification system used for pesticide removal.
    Plasmid 80(Special Issue S1): 16-23.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733521
    Stoeveken J, Singh R, Kolkenbrock S, Zakrzewski M, Wibberg D, Eikmeyer FG, Pühler A, Schlüter A, Moerschbacher BM (2015)
    Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample.
    Journal of Biotechnology 201: 60-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717648
    Hahnke S, Maus I, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2015)
    Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.
    Journal of Biotechnology 193: 34-36.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134
    Maus I, Cibis KG, Wibberg D, Winkler A, Stolze Y, König H, Pühler A, Schlüter A (2015)
    Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant.
    Journal of Biotechnology 203: 17-18.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2901302
    Verwaaijen B, Pühler A, Niehaus K, Schlüter A (2015)
    Analysis of the pathogenic interaction of R. solani On L. sativa by means of transcriptomics.
    Mycoses 58(Suppl. 3): 49-50.
    PUB | WoS
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2733509
    Maus I, Wibberg D, Stantscheff R, Stolze Y, Blom J, Eikmeyer FG, Fracowiak J, König H, Pühler A, Schlüter A (2015)
    Insights into the annotated genome sequence of Methanoculleus bourgensis MS2(T), related to dominant methanogens in biogas-producing plants.
    Journal of Biotechnology 201: 43-53.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214
    Koeck DE, Maus I, Wibberg D, Winkler A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2015)
    Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor.
    Journal of Biotechnology 214: 59-60.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2731292
    Tomazetto G, Wibberg D, Schlüter A, Oliveira VM (2015)
    New FeFe-hydrogenase genes identified in a metagenomic fosmid library from a municipal wastewater treatment plant as revealed by high-throughput sequencing.
    Research in Microbiology 166(1): 9-19.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2669237
    Dealtry S, Ding G-C, Weichelt V, Dunon V, Schlüter A, Carla Martini M, Florencia Del Papa M, Lagares A, Amos GCA, Wellington EMH, Gaze WH, Sipkema D, Sjoling S, Springael D, Heuer H, van Elsas JD, Thomas C, Smalla K (2014)
    Cultivation-Independent Screening Revealed Hot Spots of IncP-1, IncP-7 and IncP-9 Plasmid Occurrence in Different Environmental Habitats.
    PLoS ONE 9(2): e89922.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2658490
    Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D (2014)
    Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids.
    BMC Genomics 15(1): 124.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678800 OA
    Kröber M, Wibberg D, Grosch R, Eikmeyer FG, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A (2014)
    Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing.
    Frontiers in Microbiology 5: 252.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717549
    Geizecler T, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M (2014)
    Complete genome sequence of Peptoniphilus sp strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation.
    Journal of Biotechnology 192: 59-61.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694902
    Cretoiu MS, Kielak AM, Schlüter A, van Elsas JD (2014)
    Bacterial communities in chitin-amended soil as revealed by 16S rRNA gene based pyrosequencing.
    Soil Biology and Biochemistry 76: 5-11.
    PUB | DOI | WoS
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694915
    Hahnke S, Wibberg D, Geizecler T, Pühler A, Klocke M, Schlüter A (2014)
    Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw.
    Journal of Biotechnology 184: 199-200.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693310
    Wibberg D, Jelonek L, Rupp O, Kröber M, Goesmann A, Grosch R, Pühler A, Schlüter A (2014)
    Transcriptome analysis of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 applying high-throughput sequencing of expressed sequence tags (ESTs).
    Fungal Biology 118(9-10): 800-813.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2690688
    Lebuhn M, Hanreich A, Klocke M, Schlüter A, Bauer C, Perez CM (2014)
    Towards molecular biomarkers for biogas production from lignocellulose-rich substrates.
    Anaerobe 29: 10-21.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685861
    Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S (2014)
    Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background.
    FEMS Microbiology Ecology 88(3): 565-578.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2675608
    Wibberg D, Torres Tejerizo G, Florencia Del Papa M, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M (2014)
    Genome sequence of the acid-tolerant strain Rhizobium sp LPU83.
    Journal of Biotechnology 176: 40-41.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717539
    Maus I, Stantscheff R, Wibberg D, Stolze Y, Winkler A, Pühler A, König H, Schlüter A (2014)
    Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT.
    Journal of Biotechnology 192: 40-41.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717558
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Liebl W, Schlüter A (2014)
    First draft genome sequence of the amylolytic Bacillus thermoamylovorans wild-type strain 1A1 isolated from a thermophilic biogas plant.
    Journal of Biotechnology 192: 154-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2707731
    Koeck DE, Wibberg D, Maus I, Winkler A, Albersmeier A, Zverlov VV, Liebl W, Pühler A, Schwarz WH, Schlüter A (2014)
    Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant.
    Journal of Biotechnology 188: 136-137.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676049
    Schlüter A, Nordmann P, Bonnin RA, Millemann Y, Eikmeyer FG, Wibberg D, Pühler A, Poirel L (2014)
    IncH-type plasmid harboring the blaCTX-M-15, blaDHA-1, and qnrB4 genes recovered from animal isolates.
    Antimicrobial Agents and Chemotherapy 58(7): 3768-3773.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
    Wibberg D, Luque-Almagro VM, Igeño MI, Bremges A, Roldán MD, Merchán F, Sáez LP, Guijo MI, Manso MI, Macías D, Cabello P, Becerra G, Ibáñez MI, Carmona MI, Escribano MP, Castillo F, Sczyrba A, Moreno-Vivián C, Blasco R, Pühler A, Schlüter A (2014)
    Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
    Journal of biotechnology 175: 67-68.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605193 OA
    Eikmeyer FG, Rademacher A, Hanreich A, Hennig M, Jaenicke S, Maus I, Wibberg D, Zakrzewski M, Pühler A, Klocke M, Schlüter A (2013)
    Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms.
    Biotechnology for Biofuels 6(1): 49.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2549908
    Wibberg D, Jelonek L, Rupp O, Kröber M, Eikmeyer FG, Goesmann A, Hartmann A, Borriss R, Grosch R, Pühler A, Schlüter A (2013)
    Establishment and interpretation of the genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.
    Journal of Biotechnology 167(2): 142-155.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427
    Wibberg D, Blom J, Rückert C, Winkler A, Albersmeier A, Pühler A, Schlüter A, Scharf BE (2013)
    Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis.
    Journal of Biotechnology 168(4): 731-733.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645247
    Maus I, Wibberg D, Stantscheff R, Cibis K, Eikmeyer FG, König H, Pühler A, Schlüter A (2013)
    Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant.
    Journal of Biotechnology 168(4): 734-736.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2605230
    Hanreich A, Schimpf U, Zakrzewski M, Schlüter A, Benndorf D, Heyer R, Rapp E, Pühler A, Reichl U, Klocke M (2013)
    Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation.
    Systematic and Applied Microbiology 36(5): 330-338.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2609868
    Shah V, Zakrzewski M, Wibberg D, Eikmeyer FG, Schlüter A, Madamwar D (2013)
    Taxonomic Profiling and Metagenome Analysis of a Microbial Community from a Habitat Contaminated with Industrial Discharges.
    Microbial Ecology 66(3): 533-550.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2635526
    Koeck DE, Wibberg D, Koellmeier T, Blom J, Jaenicke S, Winkler A, Albersmeier A, Zverlov VV, Pühler A, Schwarz WH, Schlüter A (2013)
    Draft genome sequence of the cellulolytic Clostridium thermocellum wild-type strain BC1 playing a role in cellulosic biomass degradation.
    Journal of Biotechnology 168(1): 62-63.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614207
    Eikmeyer FG, Köfinger P, Poschenel A, Jünemann S, Zakrzewski M, Heinl S, Mayrhuber E, Grabherr R, Pühler A, Schwab H, Schlüter A (2013)
    Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging.
    Journal of Biotechnology 167(3): 334-343.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2557080
    Bonnin RA, Poirel L, Nordmann P, Eikmeyer FG, Wibberg D, Pühler A, Schlüter A (2013)
    Complete sequence of broad-host-range plasmid pNOR-2000 harbouring the metallo-beta-lactamase gene blaVIM-2 from Pseudomonas aeruginosa.
    Journal of Antimicrobial Chemotherapy 68(5): 1060-1065.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
    Luque-Almagro VM, Acera F, Igeño MI, Wibberg D, Roldán MD, Sáez LP, Hennig M, Quesada A, Huertas MJ, Blom J, Merchán F, Escribano MP, Jaenicke S, Estepa J, Guijo MI, Martínez-Luque M, Macías D, Szczepanowski R, Becerra G, Ramirez S, Carmona MI, Gutiérrez O, Manso I, Pühler A, Castillo F, Moreno-Vivián C, Schlüter A, Blasco R (2013)
    Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.
    Environmental Microbiology 15(1): 253-270.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2546244
    Wibberg D, Szczepanowski R, Eikmeyer FG, Pühler A, Schlüter A (2013)
    The IncF plasmid pRSB225 isolated from a municipal wastewater treatment plant’s on-site preflooder combining antibiotic resistance and putative virulence functions is highly related to virulence plasmids identified in pathogenic E. coli isolates.
    Plasmid 69(2): 127-137.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
    Zakrzewski M, Bekel T, Ander C, Pühler A, Rupp O, Stoye J, Schlüter A, Goesmann A (2013)
    MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets.
    Journal of Biotechnology 167(2): 156-165.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
    Zakrzewski M, Goesmann A, Jaenicke S, Jünemann S, Eikmeyer FG, Szczepanowski R, Al-Soud WA, Sørensen S, Pühler A, Schlüter A (2012)
    Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing.
    Journal of Biotechnology 158(4): 248-258.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [47]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471858
    Ausec L, Zakrzewski M, Goesmann A, Schlüter A, Mandic-Mulec I (2012)
    Correction: bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes.
    PLoS ONE 7(1).
    PUB | DOI | PubMed | Europe PMC
     
  • [46]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472279
    Eikmeyer FG, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CB, Top EM, Pühler A, Schlüter A (2012)
    The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.
    Plasmid 68(1): 13-24.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [45]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490535
    Heinl S, Wibberg D, Eikmeyer FG, Szczepanowski R, Blom J, Linke B, Goesmann A, Grabherr R, Schwab H, Pühler A, Schlüter A (2012)
    Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage.
    Journal of Biotechnology 161(2): 153-166.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [44]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471681
    Rademacher A, Zakrzewski M, Schlüter A, Schonberg M, Szczepanowski R, Goesmann A, Pühler A, Klocke M (2012)
    Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing.
    FEMS Microbiology Ecology 79(3): 785-799.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [43]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2474305
    Girlich D, Poirel L, Szczepanowski R, Schlüter A, Nordmann P (2012)
    Carbapenem-Hydrolyzing GES-5-Encoding Gene on Different Plasmid Types Recovered from a Bacterial Community in a Sewage Treatment Plant.
    Applied and Environmental Microbiology 78(4): 1292-1295.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [42]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529610
    Schork S, Schlüter A, Blom J, Schneiker-Bekel S, Pühler A, Goesmann A, Frosch M, Schoen C (2012)
    Genome Sequence of a Neisseria meningitidis Capsule Null Locus Strain from the Clonal Complex of Sequence Type 198.
    Journal of Bacteriology 194(18): 5144-5145.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2530446
    Stolze Y, Eikmeyer FG, Wibberg D, Brandis G, Karsten C, Krahn I, Schneiker-Bekel S, Viehöver P, Barsch A, Keck M, Top EM, Niehaus K, Schlüter A (2012)
    IncP-1 beta plasmids of Comamonas sp and Delftia sp strains isolated from a wastewater treatment plant mediate resistance to and decolorization of the triphenylmethane dye crystal violet.
    Microbiology 158(Pt_8): 2060-2072.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
    Maus I, Wibberg D, Stantscheff R, Eikmeyer FG, Seffner A, Boelter J, Szczepanowski R, Blom J, Jaenicke S, König H, Pühler A, Schlüter A (2012)
    Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester.
    Journal of Bacteriology 194(19): 5487-5488.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [39]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
    Dohrmann AB, Küting M, Jünemann S, Jaenicke S, Schlüter A, Tebbe CC (2012)
    Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties.
    The ISME journal 7(1): 37-49.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
    Jaenicke S, Ander C, Bekel T, Bisdorf R, Dröge M, Gartemann K-H, Jünemann S, Kaiser O, Krause L, Tille F, Zakrzewski M, Pühler A, Schlüter A, Goesmann A (2011)
    Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing.
    PLoS ONE 6(1): e14519.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [37]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2411830
    Ausec L, Zakrzewski M, Goesmann A, Schlüter A, Mandic-Mulec I (2011)
    Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes.
    PLoS ONE 6(10): e25724.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [36]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
    Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Szczepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A (2011)
    Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.
    Journal of Biotechnology 155(1): 50-62.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [35]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326465
    Torres Tejerizo G, Florencia Del Papa M, Draghi W, Lozano M, de los Angeles Giusti M, Martini C, Eugenia Salas M, Salto I, Wibberg D, Szczepanowski R, Weidner S, Schlüter A, Lagares A, Pistorio M (2011)
    First genomic analysis of the broad-host-range Rhizobium sp LPU83 strain, a member of the low-genetic diversity Oregon-like Rhizobium sp group.
    Journal of Biotechnology 155(1): 3-10.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
    Szczepanowski R, Eikmeyer FG, Harfmann J, Blom J, Rogers LM, Top EM, Schlüter A (2011)
    Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions.
    Journal of Biotechnology 155(1): 95-103.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [33]
    2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
    Jaenicke S, Zakrzewski M, Jünemann S, Pühler A, Goesmann A, Schlüter A (2011)
    Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods.
    In: Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats. de Bruijn FJ (Ed); Hoboken, NJ, USA: Wiley-Blackwell: 403-414.
    PUB | DOI
     
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    2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
    Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter F-J, Weidner S, Goesmann A, Pühler A, Schlüter A (In Press)
    The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.
    Journal of Biotechnology 155(1): 20-33.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [31]
    2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897327 OA
    Mussgnug JH, Klassen V, Schlüter A, Kruse O (2010)
    Microalgae as substrates for fermentative biogas production in a combined biorefinery concept.
    Journal of Biotechnology 150(1): 51-56.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
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    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009
    Krause L, Diaz NN, Edwards RA, Gartemann K-H, Krömeke H, Neuweger H, Pühler A, Runte KJ, Schlüter A, Stoye J, Szczepanowski R, Tauch A, Goesmann A (2008)
    Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor.
    JOURNAL OF BIOTECHNOLOGY 136(1-2): 91-101.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [29]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585956
    Stiens M, Becker A, Bekel T, Gödde V, Goesmann A, Niehaus K, Schneiker-Bekel S, Selbitschka W, Weidner S, Schlüter A, Pühler A (2008)
    Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11.
    Journal of Biotechnology 136(1-2): 31-37.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [28]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987
    Schlüter A, Bekel T, Diaz NN, Dondrup M, Eichenlaub R, Gartemann K-H, Krahn I, Krause L, Kroemeke H, Kruse O, Mussgnug JH, Neuweger H, Niehaus K, Pühler A, Runte KJ, Szczepanowski R, Tauch A, Tilker A, Viehöver P, Goesmann A (2008)
    The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology.
    Journal of Biotechnology 136(1-2): 77-90.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [27]
    2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1631126
    Kuhn S, Stiens M, Pühler A, Schlüter A (2008)
    Prevalence of pSmeSM11a-like plasmids in indigenous Sinorhizobium meliloti strains isolated in the course of a field release experiment with genetically modified S-meliloti strains.
    FEMS MICROBIOLOGY ECOLOGY 63(1): 118-131.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [26]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593538
    Schlüter A, Szczepanowski R, Pühler A, Top EM (2007)
    Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool.
    FEMS MICROBIOLOGY REVIEWS 31(4): 449-477.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [25]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1595014
    Schlüter A, Szczepanowski R, Kurz N, Schneiker-Bekel S, Krahn I, Pühler A (2007)
    Erythromycin resistance-conferring plasmid pRSB105, isolated from a sewage treatment plant, harbors a new macrolide resistance determinant, an integron-containing Tn402-like element, and a large region of unknown function.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73(6): 1952-1960.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [24]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1593746
    Stiens M, Schneiker-Bekel S, Pühler A, Schlüter A (2007)
    Sequence analysis of the 181-kb accessory plasmid pSmeSM11b, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment.
    FEMS MICROBIOLOGY LETTERS 271(2): 297-309.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [23]
    2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1946125
    Schlüter A, Krahn I, Kollin F, Bonemann G, Stiens M, Szczepanowski R, Schneiker-Bekel S, Pühler A (2007)
    IncP-1-beta plasmid pGNB1 isolated from a bacterial community from a wastewater treatment plant mediates decolorization of triphenylmethane dyes.
    Appl Environ Microbiol 73(20): 6345-6350.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [22]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1598081
    Bönemann G, Stiens M, Pühler A, Schlüter A (2006)
    Mobilizable IncQ-related plasmid carrying a new quinolone resistance gene, qnrS2, isolated from the bacterial community of a wastewater treatment plant.
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 50(9): 3075-3080.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599383
    Stiens M, Schneiker-Bekel S, Keller M, Kuhn S, Pühler A, Schlüter A (2006)
    Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experimerit.
    Appl Environ Microbiol 72(5): 3662-3672.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1604328
    Szczepanowski R, Braun S, Riedel V, Schneiker-Bekel S, Krahn I, Pühler A, Schlüter A (2005)
    The 120 592 bp lncF plasmid pRSB107 isolated from a sewage-treatment plant encodes nine different anti biotic-resistance determinants, two iron-acquisition systems and other putative virulence-associated functions.
    MICROBIOLOGY-SGM 151(4): 1095-1111.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [19]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864013
    Tennstedt T, Heuer H, Top EM, Szczepanowski R, Pühler A, Schlüter A (2005)
    Genomics of resistance plasmids isolated from wastewater treatment plants.
    Plasmid 53(1): 40-41.
    PUB
     
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    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1602311
    Schlüter A, Heuer H, Szczepanowski R, Poler SM, Schneiker-Bekel S, Pühler A, Top EM (2005)
    Plasmid pB8 is closely related to the prototype IncP-1 beta plasmid R751 but transfers poorly to Escherichia coli and carries a new transposon encoding a small multidrug resistance efflux protein.
    PLASMID 54(2): 135-148.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [17]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1603956
    Tennstedt T, Szczepanowski R, Krahn I, Pühler A, Schlüter A (2005)
    Sequence of the 68,869 bp IncP-1 alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements.
    PLASMID 53(3): 218-238.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [16]
    2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1601676
    Girlich D, Poirel L, Schlüter A, Nordmann P (2005)
    TLA-2, a novel ambler class a expanded-spectrum beta-lactamase.
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 49(11): 4767-4770.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605656
    Szczepanowski R, Krahn I, Linke B, Goesmann A, Pühler A, Schlüter A (2004)
    Antibiotic multiresistance plasmid pRSB101 isolated from a wastewater treatment plant is related to plasmids residing in phytopathogenic bacteria and carries eight different resistance determinants including a multidrug transport system.
    Microbiology 150(11): 3613-3630.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [14]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605648
    Heuer H, Szczepanowski R, Schneiker-Bekel S, Pühler A, Top EM, Schlüter A (2004)
    The complete sequences of plasmids pB2 and pB3 provide evidence for a recent ancestor of the IncP-1 beta group without any accessory genes.
    Microbiology 150(11): 3591-3599.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1605701
    Krahn I, Szczepanowski R, Pühler A, Schlüter A (2004)
    Different molecular rearrangements in the integron of the IncP-1 beta resistance plasmid pB10 isolated from a wastewater treatment plant result in elevated beta-lactam resistance levels.
    ARCHIVES OF MICROBIOLOGY 182(6): 429-435.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [12]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609647
    Schlüter A, Heuer H, Szczepanowski R, Forney LJ, Thomas CM, Pühler A, Top EM (2003)
    The 64 508 bp IncP-1 beta antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1 beta group.
    Microbiology 149: 3139-3153.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [11]
    2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1612324 OA
    Tauch A, Schlüter A, Bischoff N, Goesmann A, Meyer F, Pühler A (2003)
    The 79,370-bp conjugative plasmid pB4 consists of an IncP-1 beta backbone loaded with a chromate resistance transposon, the strA-strB streptomycin resistance gene pair, the oxacillinase gene bla(NPS-1), and a tripartite antibiotic efflux system of the resistance-nodulation-division family.
    Molecular Genetics and Genomics 268(5): 570-584.
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [10]
    2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092250
    Priefer UB, Aurag J, Boesten B, Bouhmouch I, Defez R, Filali-Maltouf A, Miklis M, Moawad H, Mouhsine B, Prell J, Schlüter A, Senatore B (2001)
    Characterisation of Phaseolus symbionts isolated from Mediterranean soils and analysis of genetic factors related to pH tolerance.
    J Biotechnol 91(2-3): 223-236.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2000 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2395380
    Boesten B, Schlüter A, Prell J, Krämer M, Lipka V, Priefer UB (2000)
    Identifying genes suitable for constructing pH and salt tolerant Rhizobium inoculants for improving French bean cultivation under semiarid conditions.
    In: Proceedings of the Fourth European Nitrogen Fixation Conference. Olivares J, Palomares AJ (Eds); 319.
    PUB
     
  • [8]
    2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092286
    Schlüter A, Nohlen M, Kramer M, Defez R, Priefer UB (2000)
    The Rhizobium leguminosarum bv. viciae glnD gene, encoding a uridylyltransferase/uridylyl-removing enzyme, is expressed in the root nodule but is not essential for nitrogen fixation.
    Microbiology 146(11): 2987-2996.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [7]
    1998 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864096
    Priefer UB, Patschkowski T, Schlüter A (1998)
    Signal molecules and regulatory components in the Rhizobium-legume symbiosis.
    Endocytobiosis and Cell Research 12(3): 201-202.
    PUB
     
  • [6]
    1997 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1864089
    Schlüter A, Patschkowski T, Quandt J, Selinger LB, Weidner S, Krämer M, Zhou L, Hynes MF, Priefer UB (1997)
    Functional and regulatory analysis of the two copies of the fixNOQP operon of Rhizobium leguminosarum strain VF39.
    Mol Plant Microbe Interact 10(5): 605-616.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [5]
    1996 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2092354
    Patschkowski T, Schlüter A, Priefer UB (1996)
    Rhizobium leguminosarum bv. viciae contains a second fnr/fixK-like gene and an unusual fixL homologue.
    Mol Microbiol 21(2): 267-280.
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [4]
    1995 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1641096
    Schlüter A, Rüberg S, Krämer M, Weidner S, Priefer UB (1995)
    A homolog of the Rhizobium meliloti nitrogen fixation gene fixN is involved in the production of a microaerobically induced oxidase activity in the phytopathogenic bacterium Agrobacterium tumefacience.
    MOLECULAR & GENERAL GENETICS 247(2): 206-215.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [3]
    1992 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1647768
    de Philip P, BOISTARD P, Schlüter A, Patschkowski T, PRIEFER UB, OGARA F, BOESTEN B, NOONAN B, Pühler A (1992)
    Developmental and metabolic regulation of nitrogen-fixation gene expression in Rhizobium meliloti.
    In: Canadian Journal of Microbiology. CANADIAN JOURNAL OF MICROBIOLOGY, 38. NATL RESEARCH COUNCIL CANADA: 467-474.
    PUB | DOI | WoS
     
  • [2]
    1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1668756
    Colonna-Romano S, Arnold W, Schlüter A, Boistard P, Pühler A, Priefer UB (1990)
    An Fnr-like protein encoded in Rhizobium leguminosarum biovar viciae shows structural and functional homology to Rhizobium meliloti FixK.
    Mol Gen Genet 223(1): 138-147.
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    1989 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1653087
    Klipp W, Reilander H, Schlüter A, Krey R, Pühler A (1989)
    The Rhizobium meliloti fdxN gene encoding a ferredoxin-like protein is necessary for nitrogen fixation and is cotranscribed with nifA and nifB.
    MOLECULAR & GENERAL GENETICS 216(2-3): 293-302.
    PUB | DOI | WoS | PubMed | Europe PMC
     
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