25 Publikationen
-
2024 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2988343Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Schneeberger, K., Schulze, M., Scheffler, I., and Caspers, B. (2024). Bats, Bacteria, and Bat Smell V.2.0: Repeatable Sex-Specific Differences in Scent Organ Microbiota. Microbial Ecology 87:55.PUB | DOI | WoS | PubMed | Europe PMC
-
-
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2963726Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Engel, K., Castillo-Gutiérrez, O., Busche, T., Kalinowski, J., and Caspers, B. (2022). Timing matters: Age-dependent impacts of the social environment and host selection on the avian gut microbiota. Microbiome 10, 202.PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
-
2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962824Maraci, Ö., Corsini, M., Antonatou-Papaioannou, A., Jünemann, S., Sudyka, J., Di Lecce, I., Caspers, B., and Szulkin, M. (2022). Changes to the gut microbiota of a wild juvenile passerine in a multidimensional urban mosaic. Scientific Reports 12:6872.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., Klages, L. J., Vinke, S., Beckstette, M., et al. (2021). Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses 13:1870.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
-
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951630Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Castillo, O., Busche, T., Kalinowski, J., and Caspers, B. (2021). The Gut Microbial Composition Is Species-Specific and Individual-Specific in Two Species of Estrildid Finches, the Bengalese Finch and the Zebra Finch. Frontiers in Microbiology 12:619141.PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
-
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949051Engel, K., Pankoke, H., Jünemann, S., Brandl, H. B., Sauer, J., Griffith, S., Kalinowski, J., and Caspers, B. (2020). Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches. BMC Ecology 20:58.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944226Rettenmaier, R., Schneider, M., Munk, B., Lebuhn, M., Jünemann, S., Sczyrba, A., Maus, I., Zverlov, V., and Liebl, W. (2020). Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum. Microorganisms 8:915.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919346Hagenfeld, D., Koch, R., Jünemann, S., Prior, K., Harks, I., Eickholz, P., Hoffmann, T., Kim, T. - S., Kocher, T., Meyle, J., et al. (2018). Do we treat our patients or rather periodontal microbes with adjunctive antibiotics in periodontal therapy? A 16S rDNA microbial community analysis. PLOS ONE 13:e0195534.PUB | DOI | WoS | PubMed | Europe PMC
-
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925Engel, K., Sauer, J., Jünemann, S., Winkler, A., Wibberg, D., Kalinowski, J., Tauch, A., and Caspers, B. (2018). Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing. Microbial Ecology 76, 518-529.PUB | DOI | WoS | PubMed | Europe PMC
-
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556Jünemann, S., Kleinbölting, N., Jaenicke, S., Henke, C., Hassa, J., Nelkner, J., Stolze, Y., Albaum, S., Schlüter, A., Goesmann, A., et al. (2017). Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology 261, 10-23.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773Jünemann, S., Prior, K., Albersmeier, A., Albaum, S., Kalinowski, J., Goesmann, A., Stoye, J., and Harmsen, D. (2014). GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE 9:e107014.PUB | DOI | WoS | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309Bolzan de Campos, S., Youn, J. - W., Farina, R., Jaenicke, S., Jünemann, S., Szczepanowski, R., Beneduzi, A., Vargas, L. K., Goesmann, A., Wendisch, V. F., et al. (2013). Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65, 593-601.PUB | DOI | WoS | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228Jünemann, S., Sedlazeck, F. J., Prior, K., Albersmeier, A., John, U., Kalinowski, J., Mellmann, A., Goesmann, A., von Haeseler, A., Stoye, J., et al. (2013). Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology 31, 1148.PUB | DOI | WoS | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922Jünemann, S., Sedlazeck, F. J., Prior, K., Albersmeier, A., John, U., Kalinowski, J., Mellmann, A., Goesmann, A., von Haeseler, A., Stoye, J., et al. (2013). Updating benchtop sequencing performance comparison. Nature Biotechnology 31, 294-296.PUB | DOI | WoS | PubMed | Europe PMC
-
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614207Eikmeyer, F. G., Köfinger, P., Poschenel, A., Jünemann, S., Zakrzewski, M., Heinl, S., Mayrhuber, E., Grabherr, R., Pühler, A., Schwab, H., et al. (2013). Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging. Journal of Biotechnology 167, 334-343.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230Jünemann, S., Prior, K., Szczepanowski, R., Harks, I., Ehmke, B., Goesmann, A., Stoye, J., and Harmsen, D. (2012). Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE 7:e41606.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618Zakrzewski, M., Goesmann, A., Jaenicke, S., Jünemann, S., Eikmeyer, F. G., Szczepanowski, R., Al-Soud, W. A., Sørensen, S., Pühler, A., and Schlüter, A. (2012). Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. Journal of Biotechnology 158, 248-258.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933Dohrmann, A. B., Küting, M., Jünemann, S., Jaenicke, S., Schlüter, A., and Tebbe, C. C. (2012). Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties. The ISME journal 7, 37-49.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286Vogel, U., Szczepanowski, R., Claus, H., Jünemann, S., Prior, K., and Harmsen, D. (2012). Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology 50, 1889-1894.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276Jaenicke, S., Ander, C., Bekel, T., Bisdorf, R., Dröge, M., Gartemann, K. - H., Jünemann, S., Kaiser, O., Krause, L., Tille, F., et al. (2011). Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing. PLoS ONE 6:e14519.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751Jaenicke, S., Zakrzewski, M., Jünemann, S., Pühler, A., Goesmann, A., and Schlüter, A. (2011). “Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods” in Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats, de Bruijn, F. J. ed. (Hoboken, NJ, USA: Wiley-Blackwell), 403-414.PUB | DOI
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321Dondrup, M., Albaum, S., Griebel, T., Henckel, K., Jünemann, S., Kahlke, T., Kleindt, C. K., Kuester, H., Linke, B., Mertens, D., et al. (2009). EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics 10:50.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589098Gerlach, W., Jünemann, S., Tille, F., Goesmann, A., and Stoye, J. (2009). WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads. BMC Bioinformatics 10, 430.PUB | PDF | DOI | WoS | PubMed | Europe PMC