24 Publikationen

Alle markieren

  • [24]
    2023 | Bielefelder E-Dissertation | PUB-ID: 2968940 OA
    Jünemann, S. (2023). Quality is a Myth - Assessing and Addressing Errors in Sequencing Data. Bielefeld: Universität Bielefeld. https://doi.org/10.4119/unibi/2968940
    PUB | PDF | DOI
     
  • [23]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2963726 OA
    Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Engel, K., Castillo-Gutiérrez, O., Busche, T., Kalinowski, J., et al. (2022). Timing matters: Age-dependent impacts of the social environment and host selection on the avian gut microbiota. Microbiome, 10(1), 202. https://doi.org/10.1186/s40168-022-01401-0
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [22]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2962824 OA
    Maraci, Ö., Corsini, M., Antonatou-Papaioannou, A., Jünemann, S., Sudyka, J., Di Lecce, I., Caspers, B., et al. (2022). Changes to the gut microbiota of a wild juvenile passerine in a multidimensional urban mosaic. Scientific Reports, 12(1), 6872. https://doi.org/10.1038/s41598-022-10734-7
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [21]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
    Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., et al. (2021). Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses, 13(9), 1870. https://doi.org/10.3390/v13091870
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [20]
    2021 | Preprint | Veröffentlicht | PUB-ID: 2955069
    Maraci, Ö., Corsini, M., Antonatou-Papaioannou, A., Jünemann, S., Sudyka, J., Lecce, I. D., Caspers, B., et al. (2021). Alterations to the Gut Microbiota of a Wild Juvenile Passerine in an Urban Mosaic. bioRxiv. https://doi.org/10.1101/2021.04.15.439940
    PUB | DOI | Preprint
     
  • [19]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2951630 OA
    Maraci, Ö., Antonatou-Papaioannou, A., Jünemann, S., Castillo, O., Busche, T., Kalinowski, J., & Caspers, B. (2021). The Gut Microbial Composition Is Species-Specific and Individual-Specific in Two Species of Estrildid Finches, the Bengalese Finch and the Zebra Finch. Frontiers in Microbiology, 12, 619141. https://doi.org/10.3389/fmicb.2021.619141
    PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [18]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949051 OA
    Engel, K., Pankoke, H., Jünemann, S., Brandl, H. B., Sauer, J., Griffith, S., Kalinowski, J., et al. (2020). Family matters: skin microbiome reflects the social group and spatial proximity in wild zebra finches. BMC Ecology, 20(1), 58. https://doi.org/10.1186/s12898-020-00326-2
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [17]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944226 OA
    Rettenmaier, R., Schneider, M., Munk, B., Lebuhn, M., Jünemann, S., Sczyrba, A., Maus, I., et al. (2020). Importance of Defluviitalea raffinosedens for Hydrolytic Biomass Degradation in Co-Culture with Hungateiclostridium thermocellum. Microorganisms, 8(6), 915. https://doi.org/10.3390/microorganisms8060915
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [16]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919346
    Hagenfeld, D., Koch, R., Jünemann, S., Prior, K., Harks, I., Eickholz, P., Hoffmann, T., et al. (2018). Do we treat our patients or rather periodontal microbes with adjunctive antibiotics in periodontal therapy? A 16S rDNA microbial community analysis. PLOS ONE, 13(4), e0195534. doi:10.1371/journal.pone.0195534
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [15]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925
    Engel, K., Sauer, J., Jünemann, S., Winkler, A., Wibberg, D., Kalinowski, J., Tauch, A., et al. (2018). Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing. Microbial Ecology, 76(2), 518-529. doi:10.1007/s00248-017-1130-8
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [14]
    2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
    Jünemann, S., Kleinbölting, N., Jaenicke, S., Henke, C., Hassa, J., Nelkner, J., Stolze, Y., et al. (2017). Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology, 261(SI), 10-23. doi:10.1016/j.jbiotec.2017.08.012
    PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
     
  • [13]
    2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773
    Jünemann, S., Prior, K., Albersmeier, A., Albaum, S., Kalinowski, J., Goesmann, A., Stoye, J., et al. (2014). GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE, 9(9), e107014. doi:10.1371/journal.pone.0107014
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [12]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
    Bolzan de Campos, S., Youn, J. - W., Farina, R., Jaenicke, S., Jünemann, S., Szczepanowski, R., Beneduzi, A., et al. (2013). Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology, 65(3), 593-601. doi:10.1007/s00248-012-0132-9
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [11]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228
    Jünemann, S., Sedlazeck, F. J., Prior, K., Albersmeier, A., John, U., Kalinowski, J., Mellmann, A., et al. (2013). Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology, 31(12), 1148. https://doi.org/10.1038/nbt1213-1148e
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [10]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
    Jünemann, S., Sedlazeck, F. J., Prior, K., Albersmeier, A., John, U., Kalinowski, J., Mellmann, A., et al. (2013). Updating benchtop sequencing performance comparison. Nature Biotechnology, 31(4), 294-296. doi:10.1038/nbt.2522
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2614207
    Eikmeyer, F. G., Köfinger, P., Poschenel, A., Jünemann, S., Zakrzewski, M., Heinl, S., Mayrhuber, E., et al. (2013). Metagenome analyses reveal the influence of the inoculant Lactobacillus buchneri CD034 on the microbial community involved in grass silaging. Journal of Biotechnology, 167(3), 334-343. doi:10.1016/j.jbiotec.2013.07.021
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [8]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
    Jünemann, S., Prior, K., Szczepanowski, R., Harks, I., Ehmke, B., Goesmann, A., Stoye, J., et al. (2012). Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE, 7(8), e41606. doi:10.1371/journal.pone.0041606
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [7]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2484618
    Zakrzewski, M., Goesmann, A., Jaenicke, S., Jünemann, S., Eikmeyer, F. G., Szczepanowski, R., Al-Soud, W. A., et al. (2012). Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing. Journal of Biotechnology, 158(4), 248-258. doi:10.1016/j.jbiotec.2012.01.020
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
    Dohrmann, A. B., Küting, M., Jünemann, S., Jaenicke, S., Schlüter, A., & Tebbe, C. C. (2012). Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties. The ISME journal, 7(1), 37-49. doi:10.1038/ismej.2012.77
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [5]
    2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286
    Vogel, U., Szczepanowski, R., Claus, H., Jünemann, S., Prior, K., & Harmsen, D. (2012). Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology, 50(6), 1889-1894. doi:10.1128/JCM.00038-12
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [4]
    2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003276
    Jaenicke, S., Ander, C., Bekel, T., Bisdorf, R., Dröge, M., Gartemann, K. - H., Jünemann, S., et al. (2011). Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing. PLoS ONE, 6(1), e14519. https://doi.org/10.1371/journal.pone.0014519
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [3]
    2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2447751
    Jaenicke, S., Zakrzewski, M., Jünemann, S., Pühler, A., Goesmann, A., & Schlüter, A. (2011). Analysis of the Metagenome from a Biogas-Producing Microbial Community by Means of Bioinformatics Methods. In F. J. de Bruijn (Ed.), Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats (pp. 403-414). Hoboken, NJ, USA: Wiley-Blackwell. doi:10.1002/9781118010549.ch39
    PUB | DOI
     
  • [2]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321 OA
    Dondrup, M., Albaum, S., Griebel, T., Henckel, K., Jünemann, S., Kahlke, T., Kleindt, C. K., et al. (2009). EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics, 10(1), 50. https://doi.org/10.1186/1471-2105-10-50
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589098 OA
    Gerlach, W., Jünemann, S., Tille, F., Goesmann, A., & Stoye, J. (2009). WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads. BMC Bioinformatics, 10(1), 430. https://doi.org/10.1186/1471-2105-10-430
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     

Suche

Publikationen filtern

Darstellung / Sortierung

Export / Einbettung