PUB - Publikationen an der Universität Bielefeld

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• [13]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985

  Lewinski, M., Brüggemann, M., Köster, T., Reichel, M., Bergelt, T., Meyer, K., König, J., Zarnack, K., and Staiger, D. (2024). Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2). Nature Protocols.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [12]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2968663

  Johansson, M., Steffen, A., Lewinski, M., Kobi, N., and Staiger, D. (2023). HDF1, a novel flowering time regulator identified in a mutant suppressing sensitivity to red light reduced 1 early flowering. Scientific Reports 13:1404.

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• [11]
  

  2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598

  Lewinski, M., Steffen, A., Kachariya, N., Elgner, M., Schmal, C., Messini, N., Köster, T., Reichel, M., Sattler, M., Zarnack, K., et al. (2023). Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation. Plant Journal.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [10]
  

  2022 | Dissertation | Veröffentlicht | PUB-ID: 2981106

  Lewinski, M. (2022). Determining the binding landscape of Arabidopsis thaliana RNA-binding proteins using high-throughput sequencing. Bielefeld: Universität Bielefeld.

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• [9]
  

  2021 | Preprint | Veröffentlicht | PUB-ID: 2954082

  Arribas-Hernandez, L., Rennie, S., Köster, T., Schon, M., Porcelli, C., Lewinski, M., Enugutti, B., Nodine, M. D., Staiger, D., Andersson, R., et al. (2021). Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3. bioRxiv.

  PUB | DOI | Preprint
   
• [8]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415

  Arribas-Hernández, L., Rennie, S., Köster, T., Porcelli, C., Lewinski, M., Staiger, D., Andersson, R., and Brodersen, P. (2021). Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2. eLife 10:e72375.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942001

  Lewinski, M., Bramkamp, Y., Köster, T., and Staiger, D. (2020). SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework. BMC bioinformatics 21:113.

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• [6]
  

  2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855

  Lewinski, M., and Köster, T. (2018). “Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana” in Systems Biology, Rajewsky, N., Jurga, S., and Barciszewski, J. eds. RNA Technologies (Cham: Springer International Publishing), 77-95.

  PUB | DOI
   
• [5]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954

  Meyer, K., Köster, T., Nolte, C., Weinholdt, C., Lewinski, M., Grosse, I., and Staiger, D. (2017). Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7. Genome Biology 18:204.

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• [4]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900648

  Lewinski, M., Hallmann, A., and Staiger, D. (2016). Genome-wide identification and phylogenetic analysis of plant RNA binding proteins comprising both RNA recognition motifs and contiguous glycine residues. Molecular Genetics and Genomics 291, 763-773.

  PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
   
• [3]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685732

  Brinkrolf, C., Janowski, S. J., Kormeier, B., Lewinski, M., Hippe, K., Borck, D., and Hofestädt, R. (2014). VANESA - A Software Application for the Visualization and Analysis of Networks in System Biology Applications. Journal of Integrative Bioinformatics 11, 239.

  PUB | DOI | PubMed | Europe PMC
   
• [2]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705568

  Leder, V., Lummer, M., Tegeler, K., Humpert, F., Lewinski, M., Schüttpelz, M., and Staiger, D. (2014). Mutational definition of binding requirements of an hnRNP-like protein in Arabidopsis using fluorescence correlation spectroscopy. Biochemical and Biophysical Research Communications 453, 69-74.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2492305

  Gomez Porras, J. L., Lewinski, M., Riaño-Pachón, D. M., and Staiger, D. (2011). Molecular evolution of RRM-containing proteins and glycine-rich RNA-binding proteins in plants. Nature Precedings 2011.

  PUB | DOI