13 Publikationen
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2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2986985Lewinski, Martin, Brüggemann, Mirko, Köster, Tino, Reichel, Marlene, Bergelt, Thorsten, Meyer, Katja, König, Julian, Zarnack, Kathi, and Staiger, Dorothee. “Mapping protein-RNA binding in plants with individual-nucleotide-resolution UV cross-linking and immunoprecipitation (plant iCLIP2)”. Nature Protocols (2024).PUB | DOI | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2968663Johansson, Mikael, Steffen, Alexander, Lewinski, Martin, Kobi, Natalie, and Staiger, Dorothee. “HDF1, a novel flowering time regulator identified in a mutant suppressing sensitivity to red light reduced 1 early flowering”. Scientific Reports 13.1 (2023): 1404.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2023 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2985598Lewinski, Martin, Steffen, Alexander, Kachariya, Nitin, Elgner, Mareike, Schmal, Christoph, Messini, Niki, Köster, Tino, Reichel, Marlene, Sattler, Michael, Zarnack, Kathi, and Staiger, Dorothee. “Arabidopsis thaliana GLYCINE RICH RNA-BINDING PROTEIN 7 interaction with its iCLIP target LHCB1.1 correlates with changes in RNA stability and circadian oscillation”. Plant Journal (2023).PUB | DOI | WoS | PubMed | Europe PMC
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2022 | Dissertation | Veröffentlicht | PUB-ID: 2981106Lewinski, Martin. Determining the binding landscape of Arabidopsis thaliana RNA-binding proteins using high-throughput sequencing. Bielefeld: Universität Bielefeld, 2022.PUB
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2021 | Preprint | Veröffentlicht | PUB-ID: 2954082Arribas-Hernandez, Laura, Rennie, Sarah, Köster, Tino, Schon, Michael, Porcelli, Carlotta, Lewinski, Martin, Enugutti, Balaji, Nodine, Michael D, Staiger, Dorothee, Andersson, Robin, and Brodersen, Peter. “Principles of mRNA targeting and regulation via the Arabidopsis m6A-binding proteins ECT2 and ECT3”. bioRxiv (2021).PUB | DOI | Preprint
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2959415Arribas-Hernández, Laura, Rennie, Sarah, Köster, Tino, Porcelli, Carlotta, Lewinski, Martin, Staiger, Dorothee, Andersson, Robin, and Brodersen, Peter. “Principles of mRNA targeting via the Arabidopsis m6A-binding protein ECT2”. eLife 10 (2021): e72375.PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942001Lewinski, Martin, Bramkamp, Yannik, Köster, Tino, and Staiger, Dorothee. “SEQing: web-based visualization of iCLIP and RNA-seq data in an interactive python framework.”. BMC bioinformatics 21.1 (2020): 113.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2934855Lewinski, Martin, and Köster, Tino. “Systems Approaches to Map In Vivo RNA–Protein Interactions in Arabidopsis thaliana”. Systems Biology. Ed. Nikolaus Rajewsky, Stefan Jurga, and Jan Barciszewski. Cham: Springer International Publishing, 2018. RNA Technologies. 77-95.PUB | DOI
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914954Meyer, Katja, Köster, Tino, Nolte, Christine, Weinholdt, Claus, Lewinski, Martin, Grosse, Ivo, and Staiger, Dorothee. “Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7”. Genome Biology 18.1 (2017): 204.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900648Lewinski, Martin, Hallmann, Armin, and Staiger, Dorothee. “Genome-wide identification and phylogenetic analysis of plant RNA binding proteins comprising both RNA recognition motifs and contiguous glycine residues”. Molecular Genetics and Genomics 291.2 (2016): 763-773.PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685732Brinkrolf, Christoph, Janowski, Sebastian Jan, Kormeier, Benjamin, Lewinski, Martin, Hippe, Klaus, Borck, Daniela, and Hofestädt, Ralf. “VANESA - A Software Application for the Visualization and Analysis of Networks in System Biology Applications”. Journal of Integrative Bioinformatics 11.2 (2014): 239.PUB | DOI | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705568Leder, Verena, Lummer, Martina, Tegeler, Kathrin, Humpert, Fabian, Lewinski, Martin, Schüttpelz, Mark, and Staiger, Dorothee. “Mutational definition of binding requirements of an hnRNP-like protein in Arabidopsis using fluorescence correlation spectroscopy”. Biochemical and Biophysical Research Communications 453.1 (2014): 69-74.PUB | DOI | WoS | PubMed | Europe PMC
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2492305Gomez Porras, Judith Lucia, Lewinski, Martin, Riaño-Pachón, Diego Mauricio, and Staiger, Dorothee. “Molecular evolution of RRM-containing proteins and glycine-rich RNA-binding proteins in plants”. Nature Precedings 2011 (2011).PUB | DOI