72 Publikationen
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964659Handel, F.; Kulik, A.; Wex, K. W.; Berscheid, A.; Saur, J. S.; Winkler, A.; Wibberg, D.; Kalinowski, J.; Broetz-Oesterhelt, H.; Mast, Y. (2022): psi-Footprinting approach for the identification of protein synthesis inhibitor producers NAR: Genomics and Bioinformatics ,4:(3):lqac055PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950292Blifernez-Klassen, O.; Klassen, V.; Wibberg, D.; Cebeci, E.; Henke, C.; Rückert, C.; Chaudhari, S.; Rupp, O.; Blom, J.; Winkler, A.; Al-Dilaimi, A.; Goesmann, A.; Sczyrba, A.; Kalinowski, J.; Bräutigam, A.; Kruse, O. (2021): Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia Scientific Reports,11:(1):1726PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956428Mingyar, E.; Muhling, L.; Kulik, A.; Winkler, A.; Wibberg, D.; Kalinowski, J.; Blin, K.; Weber, T.; Wohlleben, W.; Stegmann, E. (2021): A Regulator Based "Semi-Targeted" Approach to Activate Silent Biosynthetic Gene Clusters International journal of molecular sciences,22:(14):7567PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955526Lick, S.; Wibberg, D.; Winkler, A.; Blom, J.; Grimmler, C.; Goesmann, A.; Kalinowski, J.; Krockel, L. (2021): Pseudomonas paraversuta sp. nov. isolated from refrigerated dry-aged beef. International journal of systematic and evolutionary microbiology,71:(6)PUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951146Glaeser, S. P.; Rückert, C.; Abdelmohsen, U. R.; Winkler, A.; Blom, J.; Goesmann, A.; Kalinowski, J.; Hentschel, U.; Busse, H. - J.; Kampfer, P. (2021): Streptomyces dysideae sp. nov., isolated from a marine Mediterranean sponge Dysidea tupha. International journal of systematic and evolutionary microbiologyPUB | DOI | WoS | PubMed | Europe PMC
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961Nilsson, J. F.; Castellani, L. G.; Draghi, W. O.; Mogro, E. G.; Wibberg, D.; Winkler, A.; Hansen, L. H.; Schlüter, A.; Pühler, A.; Kalinowski, J.; Torres Tejerizo, G. A.; Pistorio, M. (2021): Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress FEMS Microbiology Ecology,97:(1):fiaa235PUB | DOI | WoS | PubMed | Europe PMC
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948760Toniutti, M. A.; Albicoro, F. J.; Castellani, L. G.; Lopez Garcia, S. L.; Fornasero, L. V.; Zuber, N. E.; Vera, L. M.; Vacca, C.; Cafiero, J. H.; Winkler, A.; Kalinowski, J.; Lagares, A.; Torres Tejerizo, G. A.; Del Papa, M. F. (2020): Genome sequence of Bradyrhizobium yuanmingense strain P10 130, a highly efficient nitrogen-fixing bacterium that could be used for Desmodium incanum inoculation. GenePUB | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839Nelkner, J.; Tejerizo, G. T.; Hassa, J.; Lin, T. W.; Witte, J.; Verwaaijen, B.; Winkler, A.; Bunk, B.; Spröer, C.; Overmann, J.; Grosch, R.; Pühler, A.; Schlüter, A. (2019): Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics Genes,10:(8):601PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937242Sorieul, L.; Rückert, C.; Al-Dilaimi, A.; Winkler, A.; Kalinowski, J.; Pham, D.; Wabete, N.; Boulo, V. (2019): Whole-Genome Sequence of Pseudoalteromonas sp. NC201, a Probiotic Strain for Litopenaeus stylirostris Hatcheries in New Caledonia Microbiology resource announcements,8:(34):e00477-19PUB | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938561Lick, S.; Krockel, L.; Wibberg, D.; Winkler, A.; Blom, J.; Goesmann, A.; Kalinowski, J. (2019): Pseudomonas bubulae sp. nov., isolated from beef. International journal of systematic and evolutionary microbiology,70:(1): 292-301.PUB | DOI | WoS | PubMed | Europe PMC
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556Verwaaijen, B.; Wibberg, D.; Winkler, A.; Zrenner, R.; Bednarz, H.; Niehaus, K.; Grosch, R.; Pühler, A.; Schlüter, A. (2019): A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani Scientific Reports,9:(1):7221PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932964Bracharz, F.; Helmdach, D.; Aschenbrenner, I.; Funck, N.; Wibberg, D.; Winkler, A.; Bohnen, F.; Kalinowski, J.; Mehlmer, N.; Brueck, T. B. (2018): Harvest of the Oleaginous Microalgae Scenedesmus obtusiusculus by Flocculation From Culture Based on Natural Water Sources FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY,6:200PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932979Brakstad, O. G.; Davies, E. J.; Ribicic, D.; Winkler, A.; Bronner, U.; Netzer, R. (2018): Biodegradation of dispersed oil in natural seawaters from Western Greenland and a Norwegian fjord POLAR BIOLOGY,41:(12): 2435-2450.PUB | DOI | WoS
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777Celis, J. S.; Wibberg, D.; Ramírez-Portilla, C.; Rupp, O.; Sczyrba, A.; Winkler, A.; Kalinowski, J.; Wilke, T. (2018): Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts GigaScience,7:(7):giy075PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920680Adamek, M.; Alanjary, M.; Sales-Ortells, H.; Goodfellow, M.; Bull, A. T.; Winkler, A.; Wibberg, D.; Kalinowski, J.; Ziemert, N. (2018): Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species BMC GENOMICS,19:(1):15PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930633Ribicic, D.; McFarlin, K. M.; Netzer, R.; Brakstad, O. G.; Winkler, A.; Throne-Holst, M.; Storseth, T. R. (2018): Oil type and temperature dependent biodegradation dynamics - Combining chemical and microbial community data through multivariate analysis BMC MICROBIOLOGY,18:(1):83PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919058Senges, C. H. R.; Al-Dilaimi, A.; Marchbank, D. H.; Wibberg, D.; Winkler, A.; Haltli, B.; Nowrousian, M.; Kalinowski, J.; Kerr, R. G.; Bandow, J. E. (2018): The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,115:(10): 2490-2495.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925Engel, K.; Sauer, J.; Jünemann, S.; Winkler, A.; Wibberg, D.; Kalinowski, J.; Tauch, A.; Caspers, B. (2018): Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing Microbial Ecology,76:(2): 518-529.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918969Busche, T.; Novakova, R.; Al'Dilaimi, A.; Homerova, D.; Feckova, L.; Rezuchova, B.; Mingyar, E.; Csolleiova, D.; Bekeova, C.; Winkler, A.; Sevcikova, B.; Kalinowski, J.; Kormanec, J.; Rückert, C. (2018): Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin Genome Announcements,6:(9):e00103-18PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037Verwaaijen, B.; Wibberg, D.; Nelkner, J.; Gordin, M.; Rupp, O.; Winkler, A.; Bremges, A.; Blom, J.; Grosch, R.; Pühler, A.; Schlüter, A. (2018): Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome Journal of Biotechology,267: 12-18.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920334Brakstad, O. G.; Ribicic, D.; Winkler, A.; Netzer, R. (2018): Biodegradation of dispersed oil in seawater is not inhibited by a commercial oil spill dispersant MARINE POLLUTION BULLETIN,129:(2): 555-561.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920701Ribicic, D.; Netzer, R.; Winkler, A.; Brakstad, O. G. (2018): Microbial communities in seawater from an Arctic and a temperate Norwegian fjord and their potentials for biodegradation of chemically dispersed oil at low seawater temperatures MARINE POLLUTION BULLETIN,129:(1): 308-317.PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920259Heine, T.; Zimmerling, J.; Ballmann, A.; Kleeberg, S. B.; Rückert, C.; Busche, T.; Winkler, A.; Kalinowski, J.; Poetsch, A.; Scholtissek, A.; Oelschlaegel, M.; Schmidt, G.; Tischler, D. (2018): On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2 APPLIED AND ENVIRONMENTAL MICROBIOLOGY,84:(9):16PUB | DOI | WoS | PubMed | Europe PMC
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918672Koepff, J.; Morschett, H.; Busche, T.; Winkler, A.; Kalinowski, J.; Wiechert, W.; Oldiges, M. (2018): Differential transcriptomic analysis reveals hidden light response in Streptomyces lividans BIOTECHNOLOGY PROGRESS,34:(1): 287-292.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114Verwaaijen, B.; Wibberg, D.; Kröber, M.; Winkler, A.; Zrenner, R.; Bednarz, H.; Niehaus, K.; Grosch, R.; Pühler, A.; Schlüter, A. (2017): The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.) PLOS ONE,12:(5):e0177278PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913386Jaeger, D.; Winkler, A.; Mussgnug, J. H.; Kalinowski, J.; Goesmann, A.; Kruse, O. (2017): Time-resolved transcriptome analysis and lipid pathway reconstruction of the oleaginous green microalga Monoraphidium neglectum reveal a model for triacylglycerol and lipid hyperaccumulation Biotechnology for Biofuels,10:(1):197PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913038Klassen, V.; Blifernez-Klassen, O.; Wibberg, D.; Winkler, A.; Kalinowski, J.; Posten, C.; Kruse, O. (2017): Highly efficient methane generation from untreated microalgae biomass Biotechnology for Biofuels,10:(1):186PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910668Friehs, K.; Schwarzhans, J. P.; Luttermann, T.; Wibberg, D.; Winkler, A.; Hübner, W.; Huser, T.; Kalinowski, J. (2017): A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production Frontiers in Microbiology,8:780PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419Torres Tejerizo, G. A.; Wibberg, D.; Winkler, A.; Ormeño-Orrillo, E.; Martínez-Romero, E.; Niehaus, K.; Pühler, A.; Kalinowski, J.; Lagares, A.; Schlüter, A.; Pistorio, M. (2017): Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T Genome Announcements,5:(4): e01513-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910373Bartholomäus, A.; Wibberg, D.; Winkler, A.; Pühler, A.; Schlüter, A.; Varrelmann, M. (2017): Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales Archives of Virology,162:(2): 555-559.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914537Kalinowski, J.; Ahrens, B.; Al-Dilaimi, A.; Winkler, A.; Wibberg, D.; Schleenbecker, U.; Rückert, C.; Wölfel, R.; Grass, G. (2017): Isolation and whole genome analysis of endospore-forming bacteria from heroin. Forensic Sci Int Genet,32: 1-6.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913403Jahn, L.; Schafhauser, T.; Wibberg, D.; Rückert, C.; Winkler, A.; Kulik, A.; Weber, T.; Flor, L.; van Pée, K. - H.; Kalinowski, J.; Ludwig-Müller, J.; Wohlleben, W. (2017): Linking secondary metabolites to biosynthesis genes in the fungal endophyte Cyanodermella asteris: The anti-cancer bisanthraquinone skyrin. Journal of Biotechnology,257: 233-239.PUB | DOI | WoS | PubMed | Europe PMC
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911777Torres Tejerizo, G. A.; Kim, Y. S.; Maus, I.; Wibberg, D.; Winkler, A.; Off, S.; Pühler, A.; Scherer, P.; Schlüter, A. (2017): Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste Journal of Biotechnology,247: 1-5.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431Bartholomaeus, A.; Wibberg, D.; Winkler, A.; Pühler, A.; Schlüter, A.; Varrelmann, M. (2016): Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV PLOS ONE,11:(11):e0165965PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905634Busche, T.; Winkler, A.; Wedderhoff, I.; Rückert, C.; Kalinowski, J.; Lucana, D. O. de O. (2016): Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes PLOS ONE,11:(8):e0159873PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901383Moghadam, M. S.; Albersmeier, A.; Winkler, A.; Cimmino, L.; Rise, K.; Hohmann-Marriott, M. F.; Kalinowski, J.; Rückert, C.; Wentzel, A.; Lale, R. (2016): Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity. BMC Genomics,17:(1):117PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655Schwarzhans, J. P.; Wibberg, D.; Winkler, A.; Luttermann, T.; Kalinowski, J.; Friehs, K. (2016): Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization Microbial Cell Factories,15:(1):84PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993Koeck, D. E.; Maus, I.; Wibberg, D.; Winkler, A.; Zverlov, V. V.; Liebl, W.; Pühler, A.; Schwarz, W. H.; Schlüter, A. (2016): Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor Genome Announcements,4:(4): e00687-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970Maus, I.; Wibberg, D.; Winkler, A.; Pühler, A.; Schnürer, A.; Schlüter, A. (2016): Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor Genome Announcements,4:(3):e00568-16PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978Koeck, D. E.; Maus, I.; Wibberg, D.; Winkler, A.; Zverlov, V. V.; Liebl, W.; Pühler, A.; Schwarz, W. H.; Schlüter, A. (2016): Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor Genome Announcements,4:(3): e00609-16.PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907685Schaffert, L.; Albersmeier, A.; Winkler, A.; Kalinowski, J.; Zotchev, S. B.; Rückert, C. (2016): Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177T isolated from a marine sponge Standards in Genomic Sciences,11:(1):91PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676Jaenicke, S.; Bunk, B.; Wibberg, D.; Spröer, C.; Hersemann, L.; Blom, J.; Winkler, A.; Schatschneider, S.; Albaum, S.; Kölliker, R.; Goesmann, A.; Pühler, A.; Overmann, J.; Vorhölter, F. - J. (2016): Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T) Genome Announcements,4:(6):e01334-16PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679Schwarzhans, J. P.; Wibberg, D.; Winkler, A.; Luttermann, T.; Kalinowski, J.; Friehs, K. (2016): Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing Scientific Reports,6:(1):38952PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976Blifernez-Klassen, O.; Wibberg, D.; Winkler, A.; Blom, J.; Goesmann, A.; Kalinowski, J.; Kruse, O. (2016): Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa) Genome Announcements,4:(3):e00524-16PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715Koeck, D. E.; Wibberg, D.; Maus, I.; Winkler, A.; Albersmeier, A.; Zverlov, V. V.; Liebl, W.; Pühler, A.; Schwarz, W. H.; Schlüter, A. (2016): Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")" Journal of Biotechnology,237:35PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704Celis, J. S.; Wibberg, D.; Winkler, A.; Wilke, T.; Kalinowski, J. (2016): Complete mitochondrial genome of the scleractinian coral Porites rus Mitochondrial DNA,27:(5): 3695-3696.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126Liebe, S.; Wibberg, D.; Winkler, A.; Pühler, A.; Schlüter, A.; Varrelmann, M. (2016): Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes FEMS Microbiology Ecology,92:(2):fiw004PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675Krahn, T.; Wibberg, D.; Maus, I.; Winkler, A.; Bontron, S.; Sczyrba, A.; Nordmann, P.; Pühler, A.; Poirel, L.; Schlüter, A. (2016): Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene. Antimicrobial Agents and Chemotherapy,60:(5): 3032-3040.PUB | DOI | WoS | PubMed | Europe PMC
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905504Kröber, M.; Verwaaijen, B.; Wibberg, D.; Winkler, A.; Pühler, A.; Schlüter, A. (2016): Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing Journal of Biotechnology,231: 212-223.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906Bremges, A.; Maus, I.; Belmann, P.; Eikmeyer, F. G.; Winkler, A.; Albersmeier, A.; Pühler, A.; Schlüter, A.; Sczyrba, A. (2015): Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant GigaScience,4:(1):33PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748Krahn, T.; Wibberg, D.; Maus, I.; Winkler, A.; Pühler, A.; Poirel, L.; Schlüter, A. (2015): Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses Genome Announcements,3:(4): e00850-15.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753051Rückert, C.; Albersmeier, A.; Winkler, A.; Tauch, A. (2015): Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA Genome announcements,3:(3):e00571-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753057Rückert, C.; Albersmeier, A.; Winkler, A.; Tauch, A. (2015): Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis Genome announcements,3:(3):e00572-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035Arnold, M.; Wibberg, D.; Blom, J.; Schatschneider, S.; Winkler, A.; Kutter, Y.; Rückert, C.; Albersmeier, A.; Albaum, S.; Goesmann, A.; Zange, S.; Heesemann, J.; Pühler, A.; Hogardt, M.; Vorhölter, F. - J. (2015): Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum Genome announcements,3:(4):e00680-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2769395Rückert, C.; Eimer, J.; Winkler, A.; Tauch, A. (2015): Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus Genome announcements,3:(4):e00959-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190Rückert, C.; Kriete, M.; Jaenicke, S.; Winkler, A.; Tauch, A. (2015): Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare Genome announcements,3:(4):e00783-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197Rückert, C.; Kriete, M.; Jaenicke, S.; Winkler, A.; Tauch, A. (2015): Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise Genome announcements,3:(4):e00784-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775257Rückert, C.; Eimer, J.; Winkler, A.; Tauch, A. (2015): Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis Genome announcements,3:(5):e01012-15PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064Krahn, T.; Wibberg, D.; Maus, I.; Winkler, A.; Nordmann, P.; Pühler, A.; Poirel, L.; Schlüter, A. (2015): Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1 Genome Announcements,3:(5):e01008-15PUB | PDF | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144Wibberg, D.; Rupp, O.; Jelonek, L.; Kröber, M.; Verwaaijen, B.; Blom, J.; Winkler, A.; Goesmann, A.; Grosch, R.; Pühler, A.; Schlüter, A. (2015): Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system Journal of Biotechnology,203: 19-21.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764512Rückert, C.; Birmes, F. S.; Müller, C.; Niewerth, H.; Winkler, A.; Fetzner, S.; Kalinowski, J. (2015): Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules Journal of biotechnology,211: 99-100.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783Ortseifen, V.; Winkler, A.; Albersmeier, A.; Wendler, S.; Pühler, A.; Kalinowski, J.; Rückert, C. (2015): Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid Journal of Biotechnology,194: 81-83.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122Wibberg, D.; Alkhateeb, R.; Winkler, A.; Albersmeier, A.; Schatschneider, S.; Albaum, S.; Niehaus, K.; Hublik, G.; Pühler, A.; Vorhölter, F. - J. (2015): Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951) Journal of Biotechnology,204: 45-46.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134Maus, I.; Cibis, K. G.; Wibberg, D.; Winkler, A.; Stolze, Y.; König, H.; Pühler, A.; Schlüter, A. (2015): Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant Journal of Biotechnology,203: 17-18.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877Rückert, C.; Albersmeier, A.; Busche, T.; Jaenicke, S.; Winkler, A.; Friðjónsson, Ó. H.; Hreggviðsson, G. Ó.; Lambert, C.; Badcock, D.; Bernaerts, K.; Anne, J.; Economou, A.; Kalinowski, J. (2015): Complete genome sequence of Streptomyces lividans TK24 Journal of Biotechnology,199: 21-22.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214Koeck, D. E.; Maus, I.; Wibberg, D.; Winkler, A.; Zverlov, V. V.; Liebl, W.; Pühler, A.; Schwarz, W. H.; Schlüter, A. (2015): Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor Journal of Biotechnology,214: 59-60.PUB | DOI | WoS | PubMed | Europe PMC
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185Schafhauser, T.; Wibberg, D.; Rückert, C.; Winkler, A.; Flor, L.; van Pée, K. - H.; Fewer, D. P.; Sivonen, K.; Jahn, L.; Ludwig-Müller, J.; Caradec, T.; Jacques, P.; Huijbers, M. M. E.; van Berkel, W. J. H.; Weber, T.; Wohlleben, W.; Kalinowski, J. (2015): Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential Journal of Biotechnology,211: 101-102.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689746Irla, M.; Neshat, A.; Winkler, A.; Albersmeier, A.; Heggeset, T. M.; Brautaset, T.; Kalinowski, J.; Wendisch, V. F.; Rückert, C. (2014): Complete genome sequence of Bacillus methanolicus MGA3, a thermotolerant amino acid producing methylotroph Journal of Biotechnology,188: 110-111.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717539Maus, I.; Stantscheff, R.; Wibberg, D.; Stolze, Y.; Winkler, A.; Pühler, A.; König, H.; Schlüter, A. (2014): Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT Journal of Biotechnology,192: 40-41.PUB | DOI | WoS | PubMed | Europe PMC
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2707731Koeck, D. E.; Wibberg, D.; Maus, I.; Winkler, A.; Albersmeier, A.; Zverlov, V. V.; Liebl, W.; Pühler, A.; Schwarz, W. H.; Schlüter, A. (2014): Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant Journal of Biotechnology,188: 136-137.PUB | DOI | WoS | PubMed | Europe PMC
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427Wibberg, D.; Blom, J.; Rückert, C.; Winkler, A.; Albersmeier, A.; Pühler, A.; Schlüter, A.; Scharf, B. E. (2013): Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis Journal of Biotechnology,168:(4): 731-733.PUB | DOI | WoS | PubMed | Europe PMC