72 Publikationen
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2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2964659Handel, F., Kulik, A., Wex, K.W., Berscheid, A., Saur, J.S., Winkler, A., Wibberg, D., Kalinowski, J., Broetz-Oesterhelt, H. & Mast, Y. (2022). psi-Footprinting approach for the identification of protein synthesis inhibitor producers. NAR: Genomics and Bioinformatics , 4(3): lqac055. Oxford University Press. doi:10.1093/nargab/lqac055.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2950292Blifernez-Klassen, O., Klassen, V., Wibberg, D., Cebeci, E., Henke, C., Rückert, C., Chaudhari, S., Rupp, O., Blom, J., Winkler, A., Al-Dilaimi, A., Goesmann, A., Sczyrba, A., Kalinowski, J., Bräutigam, A. & Kruse, O. (2021). Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia. Scientific Reports, 11(1): 1726. Springer Nature. doi:10.1038/s41598-021-81082-1.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956428Mingyar, E., Muhling, L., Kulik, A., Winkler, A., Wibberg, D., Kalinowski, J., Blin, K., Weber, T., Wohlleben, W. & Stegmann, E. (2021). A Regulator Based "Semi-Targeted" Approach to Activate Silent Biosynthetic Gene Clusters. International journal of molecular sciences, 22(14): 7567. MDPI. doi:10.3390/ijms22147567.
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2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955526Lick, S., Wibberg, D., Winkler, A., Blom, J., Grimmler, C., Goesmann, A., Kalinowski, J. & Krockel, L. (2021). Pseudomonas paraversuta sp. nov. isolated from refrigerated dry-aged beef. International journal of systematic and evolutionary microbiology, 71(6). Society for General Microbiology. doi:10.1099/ijsem.0.004822.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951146Glaeser, S.P., Rückert, C., Abdelmohsen, U.R., Winkler, A., Blom, J., Goesmann, A., Kalinowski, J., Hentschel, U., Busse, H.-J. & Kampfer, P. (2021). Streptomyces dysideae sp. nov., isolated from a marine Mediterranean sponge Dysidea tupha. International journal of systematic and evolutionary microbiology. Microbiology Society. doi:10.1099/ijsem.0.004672.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961Nilsson, J.F., Castellani, L.G., Draghi, W.O., Mogro, E.G., Wibberg, D., Winkler, A., Hansen, L.H., Schlüter, A., Pühler, A., Kalinowski, J., Torres Tejerizo, G.A. & Pistorio, M. (2021). Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress. FEMS Microbiology Ecology, 97(1): fiaa235. Oxford University Press (OUP). doi:10.1093/femsec/fiaa235.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948760Toniutti, M.A., Albicoro, F.J., Castellani, L.G., Lopez Garcia, S.L., Fornasero, L.V., Zuber, N.E., Vera, L.M., Vacca, C., Cafiero, J.H., Winkler, A., Kalinowski, J., Lagares, A., Torres Tejerizo, G.A. & Del Papa, M.F. (2020). Genome sequence of Bradyrhizobium yuanmingense strain P10 130, a highly efficient nitrogen-fixing bacterium that could be used for Desmodium incanum inoculation. Gene. Elsevier. doi:10.1016/j.gene.2020.145267.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839Nelkner, J., Tejerizo, G.T., Hassa, J., Lin, T.W., Witte, J., Verwaaijen, B., Winkler, A., Bunk, B., Spröer, C., Overmann, J., Grosch, R., Pühler, A. & Schlüter, A. (2019). Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics. Genes, 10(8): 601. MDPI. doi:10.3390/genes10080601.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937242Sorieul, L., Rückert, C., Al-Dilaimi, A., Winkler, A., Kalinowski, J., Pham, D., Wabete, N. & Boulo, V. (2019). Whole-Genome Sequence of Pseudoalteromonas sp. NC201, a Probiotic Strain for Litopenaeus stylirostris Hatcheries in New Caledonia. Microbiology resource announcements, 8(34): e00477-19. American Society for Microbiology. doi:10.1128/MRA.00477-19.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938561Lick, S., Krockel, L., Wibberg, D., Winkler, A., Blom, J., Goesmann, A. & Kalinowski, J. (2019). Pseudomonas bubulae sp. nov., isolated from beef. International journal of systematic and evolutionary microbiology, 70(1), 292-301. Microbiology Society. doi:10.1099/ijsem.0.003751.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556Verwaaijen, B., Wibberg, D., Winkler, A., Zrenner, R., Bednarz, H., Niehaus, K., Grosch, R., Pühler, A. & Schlüter, A. (2019). A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani. Scientific Reports, 9(1): 7221. Springer Nature. doi:10.1038/s41598-019-43706-5.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932964Bracharz, F., Helmdach, D., Aschenbrenner, I., Funck, N., Wibberg, D., Winkler, A., Bohnen, F., Kalinowski, J., Mehlmer, N. & Brueck, T.B. (2018). Harvest of the Oleaginous Microalgae Scenedesmus obtusiusculus by Flocculation From Culture Based on Natural Water Sources. FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 6: 200. FRONTIERS MEDIA SA. doi:10.3389/fbioe.2018.00200.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932979Brakstad, O.G., Davies, E.J., Ribicic, D., Winkler, A., Bronner, U. & Netzer, R. (2018). Biodegradation of dispersed oil in natural seawaters from Western Greenland and a Norwegian fjord. POLAR BIOLOGY, 41(12), 2435-2450. Springer. doi:10.1007/s00300-018-2380-8.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777Celis, J.S., Wibberg, D., Ramírez-Portilla, C., Rupp, O., Sczyrba, A., Winkler, A., Kalinowski, J. & Wilke, T. (2018). Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts. GigaScience, 7(7): giy075. Oxford University Press. doi:10.1093/gigascience/giy075.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920680Adamek, M., Alanjary, M., Sales-Ortells, H., Goodfellow, M., Bull, A.T., Winkler, A., Wibberg, D., Kalinowski, J. & Ziemert, N. (2018). Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species. BMC GENOMICS, 19(1): 15. Biomed Central Ltd. doi:10.1186/S12864-018-4809-4.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930633Ribicic, D., McFarlin, K.M., Netzer, R., Brakstad, O.G., Winkler, A., Throne-Holst, M. & Storseth, T.R. (2018). Oil type and temperature dependent biodegradation dynamics - Combining chemical and microbial community data through multivariate analysis. BMC MICROBIOLOGY, 18(1): 83. BMC. doi:10.1186/s12866-018-1221-9.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919058Senges, C.H.R., Al-Dilaimi, A., Marchbank, D.H., Wibberg, D., Winkler, A., Haltli, B., Nowrousian, M., Kalinowski, J., Kerr, R.G. & Bandow, J.E. (2018). The secreted metabolome of Streptomyces chartreusis and implications for bacterial chemistry. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 115(10), 2490-2495. Natl Acad Sciences. doi:10.1073/pnas.1715713115.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916925Engel, K., Sauer, J., Jünemann, S., Winkler, A., Wibberg, D., Kalinowski, J., Tauch, A. & Caspers, B. (2018). Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing. Microbial Ecology, 76(2), 518-529. Springer Nature. doi:10.1007/s00248-017-1130-8.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918969Busche, T., Novakova, R., Al'Dilaimi, A., Homerova, D., Feckova, L., Rezuchova, B., Mingyar, E., Csolleiova, D., Bekeova, C., Winkler, A., Sevcikova, B., Kalinowski, J., Kormanec, J. & Rückert, C. (2018). Complete Genome Sequence of Streptomyces lavendulae subsp. lavendulae CCM 3239 (Formerly “Streptomyces aureofaciens CCM 3239”), a Producer of the Angucycline-Type Antibiotic Auricin. Genome Announcements, 6(9): e00103-18. American Society for Microbiology. doi:10.1128/genomea.00103-18.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037Verwaaijen, B., Wibberg, D., Nelkner, J., Gordin, M., Rupp, O., Winkler, A., Bremges, A., Blom, J., Grosch, R., Pühler, A. & Schlüter, A. (2018). Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. Journal of Biotechology, 267, 12-18. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.12.021.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931970Ribicic, D., Netzer, R., Winkler, A. & Brakstad, O.G. (2018). Comparison of microbial community dynamics induced by distinct crude oil dispersions reveals compositional differences. JOURNAL OF SEA RESEARCH, 141, 112-118. Elsevier . doi:10.1016/j.seares.2018.09.001.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920334Brakstad, O.G., Ribicic, D., Winkler, A. & Netzer, R. (2018). Biodegradation of dispersed oil in seawater is not inhibited by a commercial oil spill dispersant. MARINE POLLUTION BULLETIN, 129(2), 555-561. Pergamon-Elsevier Science Ltd. doi:10.1016/j.marpolbul.2017.10.030.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920701Ribicic, D., Netzer, R., Winkler, A. & Brakstad, O.G. (2018). Microbial communities in seawater from an Arctic and a temperate Norwegian fjord and their potentials for biodegradation of chemically dispersed oil at low seawater temperatures. MARINE POLLUTION BULLETIN, 129(1), 308-317. Pergamon-elsevier Science Ltd. doi:10.1016/j.marpolbul.2018.02.024.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920259Heine, T., Zimmerling, J., Ballmann, A., Kleeberg, S.B., Rückert, C., Busche, T., Winkler, A., Kalinowski, J., Poetsch, A., Scholtissek, A., Oelschlaegel, M., Schmidt, G. & Tischler, D. (2018). On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 84(9): 16. Amer Soc Microbiology. doi:10.1128/AEM.00154-18.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918672Koepff, J., Morschett, H., Busche, T., Winkler, A., Kalinowski, J., Wiechert, W. & Oldiges, M. (2018). Differential transcriptomic analysis reveals hidden light response in Streptomyces lividans. BIOTECHNOLOGY PROGRESS, 34(1), 287-292. Wiley. doi:10.1002/btpr.2566.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912114Verwaaijen, B., Wibberg, D., Kröber, M., Winkler, A., Zrenner, R., Bednarz, H., Niehaus, K., Grosch, R., Pühler, A. & Schlüter, A. (2017). The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.). PLOS ONE, 12(5): e0177278. Public Library of Science (PLoS). doi:10.1371/journal.pone.0177278.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913386Jaeger, D., Winkler, A., Mussgnug, J.H., Kalinowski, J., Goesmann, A. & Kruse, O. (2017). Time-resolved transcriptome analysis and lipid pathway reconstruction of the oleaginous green microalga Monoraphidium neglectum reveal a model for triacylglycerol and lipid hyperaccumulation. Biotechnology for Biofuels, 10(1): 197. Springer Nature. doi:10.1186/s13068-017-0882-1.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913038Klassen, V., Blifernez-Klassen, O., Wibberg, D., Winkler, A., Kalinowski, J., Posten, C. & Kruse, O. (2017). Highly efficient methane generation from untreated microalgae biomass. Biotechnology for Biofuels, 10(1): 186. Springer Nature. doi:10.1186/s13068-017-0871-4.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910668Friehs, K., Schwarzhans, J.P., Luttermann, T., Wibberg, D., Winkler, A., Hübner, W., Huser, T. & Kalinowski, J. (2017). A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production. Frontiers in Microbiology, 8: 780. Frontiers Media SA. doi:10.3389/fmicb.2017.00780.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908419Torres Tejerizo, G.A., Wibberg, D., Winkler, A., Ormeño-Orrillo, E., Martínez-Romero, E., Niehaus, K., Pühler, A., Kalinowski, J., Lagares, A., Schlüter, A. & Pistorio, M. (2017). Genome Sequence of the Symbiotic Type Strain Rhizobium tibeticum CCBAU85039T. Genome Announcements, 5(4), e01513-16. American Society for Microbiology. doi:10.1128/genomea.01513-16.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910373Bartholomäus, A., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2017). Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales. Archives of Virology, 162(2), 555-559. Springer Wien. doi:10.1007/s00705-016-3085-3.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914537Kalinowski, J., Ahrens, B., Al-Dilaimi, A., Winkler, A., Wibberg, D., Schleenbecker, U., Rückert, C., Wölfel, R. & Grass, G. (2017). Isolation and whole genome analysis of endospore-forming bacteria from heroin. Forensic Sci Int Genet, 32, 1-6. Elsevier BV. doi:10.1016/j.fsigen.2017.10.001.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913403Jahn, L., Schafhauser, T., Wibberg, D., Rückert, C., Winkler, A., Kulik, A., Weber, T., Flor, L., van Pée, K.-H., Kalinowski, J., Ludwig-Müller, J. & Wohlleben, W. (2017). Linking secondary metabolites to biosynthesis genes in the fungal endophyte Cyanodermella asteris: The anti-cancer bisanthraquinone skyrin. Journal of Biotechnology, 257, 233-239. Elsevier BV. doi:10.1016/j.jbiotec.2017.06.410.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911777Torres Tejerizo, G.A., Kim, Y.S., Maus, I., Wibberg, D., Winkler, A., Off, S., Pühler, A., Scherer, P. & Schlüter, A. (2017). Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste. Journal of Biotechnology, 247, 1-5. Elsevier Science Bv. doi:10.1016/j.jbiotec.2017.02.015.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907431Bartholomaeus, A., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2016). Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV. PLOS ONE, 11(11): e0165965. Public Library Science. doi:10.1371/journal.pone.0165965.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905634Busche, T., Winkler, A., Wedderhoff, I., Rückert, C., Kalinowski, J. & Lucana, D.O. de O. (2016). Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes. PLOS ONE, 11(8): e0159873. Public Library Science. doi:10.1371/journal.pone.0159873.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901383Moghadam, M.S., Albersmeier, A., Winkler, A., Cimmino, L., Rise, K., Hohmann-Marriott, M.F., Kalinowski, J., Rückert, C., Wentzel, A. & Lale, R. (2016). Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity. BMC Genomics, 17(1): 117. Biomed Central. doi:10.1186/s12864-016-2445-4.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903655Schwarzhans, J.P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J. & Friehs, K. (2016). Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization. Microbial Cell Factories, 15(1): 84. BioMedCentral. doi:10.1186/s12934-016-0486-7.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904993Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Complete Genome Sequence of Herbinix luporumSD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor. Genome Announcements, 4(4), e00687-16. American Society for Microbiology. doi:10.1128/genomea.00687-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904970Maus, I., Wibberg, D., Winkler, A., Pühler, A., Schnürer, A. & Schlüter, A. (2016). Complete Genome Sequence of the MethanogenMethanoculleus bourgensisBA1 Isolated from a Biogas Reactor. Genome Announcements, 4(3): e00568-16. American Society for Microbiology. doi:10.1128/genomea.00568-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904978Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Draft Genome Sequence of Propionisporasp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor. Genome Announcements, 4(3), e00609-16. American Society for Microbiology. doi:10.1128/genomea.00609-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907685Schaffert, L., Albersmeier, A., Winkler, A., Kalinowski, J., Zotchev, S.B. & Rückert, C. (2016). Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177T isolated from a marine sponge. Standards in Genomic Sciences, 11(1): 91. Springer Nature. doi:10.1186/s40793-016-0213-3.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907676Jaenicke, S., Bunk, B., Wibberg, D., Spröer, C., Hersemann, L., Blom, J., Winkler, A., Schatschneider, S., Albaum, S., Kölliker, R., Goesmann, A., Pühler, A., Overmann, J. & Vorhölter, F.-J. (2016). Complete Genome Sequence of the Barley Pathogen Xanthomonas translucens pv. translucens DSM 18974 T (ATCC 19319 T). Genome Announcements, 4(6): e01334-16. American Society for Microbiology. doi:10.1128/genomea.01334-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907679Schwarzhans, J.P., Wibberg, D., Winkler, A., Luttermann, T., Kalinowski, J. & Friehs, K. (2016). Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing. Scientific Reports, 6(1): 38952. Springer Nature. doi:10.1038/srep38952.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904976Blifernez-Klassen, O., Wibberg, D., Winkler, A., Blom, J., Goesmann, A., Kalinowski, J. & Kruse, O. (2016). Complete Chloroplast and Mitochondrial Genome Sequences of the Hydrocarbon Oil-Producing Green MicroalgaBotryococcus brauniiRace B (Showa). Genome Announcements, 4(3): e00524-16. American Society for Microbiology. doi:10.1128/genomea.00524-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906715Koeck, D.E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2016). Corrigendum to "Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant (J. Biotechnol. 188 (2014) 136–137)")". Journal of Biotechnology, 237: 35. Elsevier Science Bv. doi:10.1016/j.jbiotec.2016.08.020.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904704Celis, J.S., Wibberg, D., Winkler, A., Wilke, T. & Kalinowski, J. (2016). Complete mitochondrial genome of the scleractinian coral Porites rus. Mitochondrial DNA, 27(5), 3695-3696. Taylor & Francis Ltd. doi:10.3109/19401736.2015.1079860.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2902126Liebe, S., Wibberg, D., Winkler, A., Pühler, A., Schlüter, A. & Varrelmann, M. (2016). Taxonomic analysis of the microbial community in stored sugar beets using high-throughput sequencing of different marker genes. FEMS Microbiology Ecology, 92(2): fiw004. Oxford Univ Press. doi:10.1093/femsec/fiw004.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901675Krahn, T., Wibberg, D., Maus, I., Winkler, A., Bontron, S., Sczyrba, A., Nordmann, P., Pühler, A., Poirel, L. & Schlüter, A. (2016). Intraspecies transfer of the chromosomally encoded Acinetobacter baumannii blaNDM-1 carbapenemase gene. Antimicrobial Agents and Chemotherapy, 60(5), 3032-3040. American Society for Microbiology. doi:10.1128/AAC.00124-16.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905504Kröber, M., Verwaaijen, B., Wibberg, D., Winkler, A., Pühler, A. & Schlüter, A. (2016). Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing. Journal of Biotechnology, 231, 212-223. Elsevier Science Bv. doi:10.1016/j.jbiotec.2016.06.013.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906Bremges, A., Maus, I., Belmann, P., Eikmeyer, F.G., Winkler, A., Albersmeier, A., Pühler, A., Schlüter, A. & Sczyrba, A. (2015). Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience, 4(1): 33. Oxford University Press. doi:10.1186/s13742-015-0073-6.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748Krahn, T., Wibberg, D., Maus, I., Winkler, A., Pühler, A., Poirel, L. & Schlüter, A. (2015). Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses. Genome Announcements, 3(4), e00850-15. American Society for Microbiology. doi:10.1128/genomea.00850-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753051Rückert, C., Albersmeier, A., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA. Genome announcements, 3(3): e00571-15. American Society for Microbiology. doi:10.1128/genomeA.00571-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753057Rückert, C., Albersmeier, A., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis. Genome announcements, 3(3): e00572-15. American Society for Microbiology. doi:10.1128/genomeA.00572-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035Arnold, M., Wibberg, D., Blom, J., Schatschneider, S., Winkler, A., Kutter, Y., Rückert, C., Albersmeier, A., Albaum, S., Goesmann, A., Zange, S., Heesemann, J., Pühler, A., Hogardt, M. & Vorhölter, F.-J. (2015). Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum. Genome announcements, 3(4): e00680-15. American Society for Microbiology. doi:10.1128/genomeA.00680-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2769395Rückert, C., Eimer, J., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus. Genome announcements, 3(4): e00959-15. American Society for Microbiology. doi:10.1128/genomeA.00959-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190Rückert, C., Kriete, M., Jaenicke, S., Winkler, A. & Tauch, A. (2015). Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare. Genome announcements, 3(4): e00783-15. American Society for Microbiology. doi:10.1128/genomeA.00783-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197Rückert, C., Kriete, M., Jaenicke, S., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise. Genome announcements, 3(4): e00784-15. American Society for Microbiology. doi:10.1128/genomeA.00784-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775257Rückert, C., Eimer, J., Winkler, A. & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis. Genome announcements, 3(5): e01012-15. American Society for Microbiology. doi:10.1128/genomeA.01012-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2785064Krahn, T., Wibberg, D., Maus, I., Winkler, A., Nordmann, P., Pühler, A., Poirel, L. & Schlüter, A. (2015). Complete Genome Sequence of the Clinical Strain Acinetobacter baumannii R2090 Carrying the Chromosomally Encoded Metallo-β-Lactamase GeneblaNDM-1. Genome Announcements, 3(5): e01008-15. American Society for Microbiology. doi:10.1128/genomeA.01008-15.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144Wibberg, D., Rupp, O., Jelonek, L., Kröber, M., Verwaaijen, B., Blom, J., Winkler, A., Goesmann, A., Grosch, R., Pühler, A. & Schlüter, A. (2015). Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system. Journal of Biotechnology, 203, 19-21. Elsevier. doi:10.1016/j.jbiotec.2015.03.005.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764512Rückert, C., Birmes, F.S., Müller, C., Niewerth, H., Winkler, A., Fetzner, S. & Kalinowski, J. (2015). Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules. Journal of biotechnology, 211, 99-100. ELSEVIER SCIENCE BV. doi:10.1016/j.jbiotec.2015.07.014.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783Ortseifen, V., Winkler, A., Albersmeier, A., Wendler, S., Pühler, A., Kalinowski, J. & Rückert, C. (2015). Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology, 194, 81-83. Elsevier BV. doi:10.1016/j.jbiotec.2014.11.036.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758122Wibberg, D., Alkhateeb, R., Winkler, A., Albersmeier, A., Schatschneider, S., Albaum, S., Niehaus, K., Hublik, G., Pühler, A. & Vorhölter, F.-J. (2015). Draft genome of the xanthan producer Xanthomonas campestris NRRL B-1459 (ATCC 13951). Journal of Biotechnology, 204, 45-46. Elsevier. doi:10.1016/j.jbiotec.2015.03.026.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758134Maus, I., Cibis, K.G., Wibberg, D., Winkler, A., Stolze, Y., König, H., Pühler, A. & Schlüter, A. (2015). Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant. Journal of Biotechnology, 203, 17-18. Elsevier. doi:10.1016/j.jbiotec.2015.03.006.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877Rückert, C., Albersmeier, A., Busche, T., Jaenicke, S., Winkler, A., Friðjónsson, Ó.H., Hreggviðsson, G.Ó., Lambert, C., Badcock, D., Bernaerts, K., Anne, J., Economou, A. & Kalinowski, J. (2015). Complete genome sequence of Streptomyces lividans TK24. Journal of Biotechnology, 199, 21-22. Elsevier. doi:10.1016/j.jbiotec.2015.02.004.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901214Koeck, D.E., Maus, I., Wibberg, D., Winkler, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2015). Draft genome sequence of Herbinix hemicellulosilytica T3/55(T), a new thermophilic cellulose degrading bacterium isolated from a thermophilic biogas reactor. Journal of Biotechnology, 214, 59-60. Elsevier Science BV. doi:10.1016/j.jbiotec.2015.07.022.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185Schafhauser, T., Wibberg, D., Rückert, C., Winkler, A., Flor, L., van Pée, K.-H., Fewer, D.P., Sivonen, K., Jahn, L., Ludwig-Müller, J., Caradec, T., Jacques, P., Huijbers, M.M.E., van Berkel, W.J.H., Weber, T., Wohlleben, W. & Kalinowski, J. (2015). Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential. Journal of Biotechnology, 211, 101-102. Elsevier. doi:10.1016/j.jbiotec.2015.07.004.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689746Irla, M., Neshat, A., Winkler, A., Albersmeier, A., Heggeset, T.M., Brautaset, T., Kalinowski, J., Wendisch, V.F. & Rückert, C. (2014). Complete genome sequence of Bacillus methanolicus MGA3, a thermotolerant amino acid producing methylotroph. Journal of Biotechnology, 188, 110-111. Elsevier BV. doi:10.1016/j.jbiotec.2014.08.013.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717539Maus, I., Stantscheff, R., Wibberg, D., Stolze, Y., Winkler, A., Pühler, A., König, H. & Schlüter, A. (2014). Complete genome sequence of the methanogenic neotype strain Methanobacterium formicicum MFT. Journal of Biotechnology, 192, 40-41. Elsevier BV. doi:10.1016/j.jbiotec.2014.09.018.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2707731Koeck, D.E., Wibberg, D., Maus, I., Winkler, A., Albersmeier, A., Zverlov, V.V., Liebl, W., Pühler, A., Schwarz, W.H. & Schlüter, A. (2014). Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant. Journal of Biotechnology, 188, 136-137. Elsevier BV. doi:10.1016/j.jbiotec.2014.08.024.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2633427Wibberg, D., Blom, J., Rückert, C., Winkler, A., Albersmeier, A., Pühler, A., Schlüter, A. & Scharf, B.E. (2013). Draft Genome Sequence of Sinorhizobium meliloti RU11/001, a model organism for flagellum structure, motility and chemotaxis. Journal of Biotechnology, 168(4), 731-733. Elsevier BV. doi:10.1016/j.jbiotec.2013.10.015.