PUB - Publikationen an der Universität Bielefeld

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• [17]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929

  Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A. Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology. 2018;11(4):667-679.

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• [16]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2917037

  Verwaaijen B, Wibberg D, Nelkner J, et al. Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome. Journal of Biotechology. 2018;267:12-18.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [15]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367

  Sczyrba A, Hofmann P, Belmann P, et al. Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods. 2017;14(11):1063-1071.

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• [14]
  

  2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915516

  Maus I, Bremges A, Stolze Y, et al. Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes. Biotechnology for Biofuels. 2017;10(1): 264.

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• [13]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905260

  Maus I, Koeck DE, Cibis KG, et al. Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates. Biotechnology for Biofuels. 2016;9(1): 171.

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• [12]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729

  Bremges A, Singer E, Woyke T, Sczyrba A. MeCorS: Metagenome-enabled error correction of single cell sequencing reads. Bioinformatics. 2016;32(14):2199-2201.

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• [11]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815

  Stolze Y, Bremges A, Rumming M, et al. Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels. 2016;9(1): 156.

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• [10]
  

  2016 | Bielefelder E-Dissertation | PUB-ID: 2906743

  Bremges A. Assembling the microbial dark matter. Bielefeld: Universität Bielefeld; 2016.

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• [9]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489

  Maus I, Cibis KG, Bremges A, et al. Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology. 2016;232:50-60.

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• [8]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302

  Wibberg D, Bremges A, Dammann-Kalinowski T, et al. Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology. 2016;232:61-68.

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• [7]
  

  2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904234

  Ortseifen V, Stolze Y, Maus I, et al. An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant. Journal of Biotechnology. 2016;231:268-279.

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• [6]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764906

  Bremges A, Maus I, Belmann P, et al. Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant. GigaScience. 2015;4(1): 33.

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• [5]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782501

  Belmann P, Dröge J, Bremges A, McHardy AC, Sczyrba A, Barton MD. Bioboxes: standardised containers for interchangeable bioinformatics software. GigaScience. 2015;4(1): 47.

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• [4]
  

  2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2762833

  Kohrs F, Wolter S, Benndorf D, et al. Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities. Proteomics. 2015;15(20):3585-3589.

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• [3]
  

  2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055

  Wibberg D, Luque-Almagro VM, Igeño MI, et al. Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology. 2014;175:67-68.

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [2]
  

  2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2645192

  Gillett A, Bergman P, Parsa R, Bremges A, Giegerich R, Jagodic M. A Silent Exonic SNP in Kdm3a Affects Nucleic Acids Structure but Does Not Regulate Experimental Autoimmune Encephalomyelitis. Plos One. 2013;8(12): e81912.

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• [1]
  

  2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785512

  Bremges A, Schirmer S, Giegerich R. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics. 2010;11(1): 222.

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